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The map label for this gene is ydbA [H]

Identifier: 152977004

GI number: 152977004

Start: 3378721

End: 3379554

Strand: Reverse

Name: ydbA [H]

Synonym: Bcer98_3309

Alternate gene names: 152977004

Gene position: 3379554-3378721 (Counterclockwise)

Preceding gene: 152977005

Following gene: 152977001

Centisome position: 82.69

GC content: 35.73

Gene sequence:

>834_bases
ATGCAATCGAAGCGAGAACAATCCATTTTACAAGAGATAAAAGAGTGGGAAAGACAATTGATAGAGCAAGAGGCGACTGA
TTTCCAAAAGATGTTTGATAAATGGATGTATGAAATAGTAGAAAAATTACCTAAAAAAAAGCGTGCAAACCTTTTTGCAA
AAGTAGATGGCTGGCTATTTCATCTTCATGCATTTATTCAAAGCTCACAATCGCAATTAGATGCGCGCAATCGTATTTTA
GGTACGGCTAGATTATTTGATGAATCCATTGAGAACTTAGATGACTTAAAAGTATTATCTATTGATCAATTAACATACAT
AGCAGAACAACAGACAGCGCGTCATCGACTATACTCTTTTGTACAAGGAGGAGCAACTGGTGTAGGTGGTTTATTCCTAT
TAACTGCGGATTTTCCTGTTATGATTGCGCTAAATGTAAAAGCTGTGCAGCTCATTGCAACTTCGTTTGGGCATGATGTG
AATAAGCCGTATGAAATGATGCTTGCTTTAAAAGTATTTCACGCTGCATTATTGCCAACAAGATTACAGCAATATGCTTG
GTCCAATTTACTGCAAGAATTAGAGCAAGAAGATTCTTACTTTTATGAAGGAGAAGAAGAGGTATTAAAACCAGCTTCAA
TAGAGGTTGTGCTTAAACAAATTTTGAAGACATTTTCAATTTATGCACTTCGTCGTAAATTATTTCAAGGTGTTCCTGTG
CTAGGAATTGCAATTGGTTCCACTGTGAATTATCGTTTAACAAGAAATGTCACCGAATTTGCAAACAGATTTTATCAAGT
GCGCTACTTATTAGAGAAAGAGAAACGTGTATGA

Upstream 100 bases:

>100_bases
TCTCTATGTATGAAATTCACATATGTGTACTTACCAAGTTTGCGAAGAAAAAGCAGAAATATGTTACAATAGAAAAAAAT
TTAGCGAGGTGATTGTTGCG

Downstream 100 bases:

>100_bases
AAAAAAGCGAGAGGCCGAGGCCTTTCGCTTTTTAGTTTGTTGCATGTTTTTTGGACATAGGAATGGATACGGTATTCTTT
TCTGCTTTTGGATAGTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MQSKREQSILQEIKEWERQLIEQEATDFQKMFDKWMYEIVEKLPKKKRANLFAKVDGWLFHLHAFIQSSQSQLDARNRIL
GTARLFDESIENLDDLKVLSIDQLTYIAEQQTARHRLYSFVQGGATGVGGLFLLTADFPVMIALNVKAVQLIATSFGHDV
NKPYEMMLALKVFHAALLPTRLQQYAWSNLLQELEQEDSYFYEGEEEVLKPASIEVVLKQILKTFSIYALRRKLFQGVPV
LGIAIGSTVNYRLTRNVTEFANRFYQVRYLLEKEKRV

Sequences:

>Translated_277_residues
MQSKREQSILQEIKEWERQLIEQEATDFQKMFDKWMYEIVEKLPKKKRANLFAKVDGWLFHLHAFIQSSQSQLDARNRIL
GTARLFDESIENLDDLKVLSIDQLTYIAEQQTARHRLYSFVQGGATGVGGLFLLTADFPVMIALNVKAVQLIATSFGHDV
NKPYEMMLALKVFHAALLPTRLQQYAWSNLLQELEQEDSYFYEGEEEVLKPASIEVVLKQILKTFSIYALRRKLFQGVPV
LGIAIGSTVNYRLTRNVTEFANRFYQVRYLLEKEKRV
>Mature_277_residues
MQSKREQSILQEIKEWERQLIEQEATDFQKMFDKWMYEIVEKLPKKKRANLFAKVDGWLFHLHAFIQSSQSQLDARNRIL
GTARLFDESIENLDDLKVLSIDQLTYIAEQQTARHRLYSFVQGGATGVGGLFLLTADFPVMIALNVKAVQLIATSFGHDV
NKPYEMMLALKVFHAALLPTRLQQYAWSNLLQELEQEDSYFYEGEEEVLKPASIEVVLKQILKTFSIYALRRKLFQGVPV
LGIAIGSTVNYRLTRNVTEFANRFYQVRYLLEKEKRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32234; Mature: 32234

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSKREQSILQEIKEWERQLIEQEATDFQKMFDKWMYEIVEKLPKKKRANLFAKVDGWLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
HLHAFIQSSQSQLDARNRILGTARLFDESIENLDDLKVLSIDQLTYIAEQQTARHRLYSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
VQGGATGVGGLFLLTADFPVMIALNVKAVQLIATSFGHDVNKPYEMMLALKVFHAALLPT
HHCCCCCCCHHEEEECCCCEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
RLQQYAWSNLLQELEQEDSYFYEGEEEVLKPASIEVVLKQILKTFSIYALRRKLFQGVPV
HHHHHHHHHHHHHHHHCCCCEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LGIAIGSTVNYRLTRNVTEFANRFYQVRYLLEKEKRV
EEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQSKREQSILQEIKEWERQLIEQEATDFQKMFDKWMYEIVEKLPKKKRANLFAKVDGWLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
HLHAFIQSSQSQLDARNRILGTARLFDESIENLDDLKVLSIDQLTYIAEQQTARHRLYSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
VQGGATGVGGLFLLTADFPVMIALNVKAVQLIATSFGHDVNKPYEMMLALKVFHAALLPT
HHCCCCCCCHHEEEECCCCEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
RLQQYAWSNLLQELEQEDSYFYEGEEEVLKPASIEVVLKQILKTFSIYALRRKLFQGVPV
HHHHHHHHHHHHHHHHCCCCEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LGIAIGSTVNYRLTRNVTEFANRFYQVRYLLEKEKRV
EEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]