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The map label for this gene is ydbJ [H]

Identifier: 152970000

GI number: 152970000

Start: 1607876

End: 1608127

Strand: Direct

Name: ydbJ [H]

Synonym: KPN_01447

Alternate gene names: 152970000

Gene position: 1607876-1608127 (Clockwise)

Preceding gene: 152969992

Following gene: 152970004

Centisome position: 30.25

GC content: 66.27

Gene sequence:

>252_bases
ATGTTAGTAGGATGTGCGGCGCTGTTGCTGTCCGCGTGCAGTAGTGAACCCGTTCAGCAGGCCACGGCGGCGCACGTCAC
GCCGGGAATGCGGGCGGCGATGAGCGACGCCGGTCAGGCCAACTGCGCCATGATAGGCGGCTCGTTATCGGTGGCTCGTC
AGCTCGATGGTTCGGCGATTGGCATGTGCGCGCTGCCGAACGGCAAACGCTGCAGCGAGCAGGCGCTGGCGGGCGGCAGC
TGCGGCTACTAA

Upstream 100 bases:

>100_bases
AATACGTACTTCCCCTCTCGACGCCGCCCGCCACGCTGCCTATTATTCTGGGGTTTGCTTTTTTAAGAAGTTTCTGAGGG
GAGAGAGAATGCGAGCTGCG

Downstream 100 bases:

>100_bases
CAGCGGCCCCGTCGCGGGGCAGCGTCAGCGGCACCTCAACGCCGGCTAGTGCATCAGGTCGGCGAGCTTATAGACCAGCG
TCTGGTCGGCGGTCGCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MLVGCAALLLSACSSEPVQQATAAHVTPGMRAAMSDAGQANCAMIGGSLSVARQLDGSAIGMCALPNGKRCSEQALAGGS
CGY

Sequences:

>Translated_83_residues
MLVGCAALLLSACSSEPVQQATAAHVTPGMRAAMSDAGQANCAMIGGSLSVARQLDGSAIGMCALPNGKRCSEQALAGGS
CGY
>Mature_83_residues
MLVGCAALLLSACSSEPVQQATAAHVTPGMRAAMSDAGQANCAMIGGSLSVARQLDGSAIGMCALPNGKRCSEQALAGGS
CGY

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081894, Length=82, Percent_Identity=85.3658536585366, Blast_Score=142, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005590 [H]

Pfam domain/function: PF03891 DUF333 [H]

EC number: NA

Molecular weight: Translated: 8117; Mature: 8117

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.2 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
13.3 %Cys+Met (Translated Protein)
7.2 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
13.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVGCAALLLSACSSEPVQQATAAHVTPGMRAAMSDAGQANCAMIGGSLSVARQLDGSAI
CCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCHHHHHHCCCCEE
GMCALPNGKRCSEQALAGGSCGY
EEEECCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MLVGCAALLLSACSSEPVQQATAAHVTPGMRAAMSDAGQANCAMIGGSLSVARQLDGSAI
CCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCHHHHHHCCCCEE
GMCALPNGKRCSEQALAGGSCGY
EEEECCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]