| Definition | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 chromosome, complete genome. |
|---|---|
| Accession | NC_009648 |
| Length | 5,315,120 |
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The map label for this gene is ydbH [H]
Identifier: 152970004
GI number: 152970004
Start: 1610580
End: 1613219
Strand: Direct
Name: ydbH [H]
Synonym: KPN_01451
Alternate gene names: 152970004
Gene position: 1610580-1613219 (Clockwise)
Preceding gene: 152970000
Following gene: 152970005
Centisome position: 30.3
GC content: 63.6
Gene sequence:
>2640_bases ATGAAGGGTAAATATAAAGCCGCCATCGCGCTGGTGTTAGTTCTGGTGTTATTGCCGCTAACCCTGCTGTTGACGCTAAC CCACTGGGTGCCGACGCTGGCGGGCATCTGGCTGCCCGTGGGCACGCGTATCTCTTTGCAGGAGAGCCCGCGCCTGACGC GGTCGGCCCTGCTGATCCCCGATCTGCGTTATCTGGTGGGCGACTGTGAAATCGCCCGGGTGACCGATGCCCGTCTCTCG CGTCCCAGCCGCTGGCGGCTGCATATTGGCCAGCTGGAGATCAACAGCGCCTGCCTGAGCAAACTGCCGGCCAGCGATCC CTCTCCCGGTTCACCGCGCACGCTTGCCGAATGGCAATCGATGTTGCCCTATAGCTGGTTAACCATTGACAATCTGCGGC TCTCGCCGTGGGAGAAATGGCAGGGGCGGCTGGTAATGTCATTAACGCCTGCGCAGCAGGATATCGGCTTTGCCGGGAAG GAACTGAGTCTGCAGGCGCGCCTGCGCGGCCAGGCGCTCACCGTCAGCCAGTTCAGCGCCCGGCTGACTGACGATCAGCC GCCGGTGAAGTTGGTGGGGACCTTCCATCTGCCGCTGGTGCCGGATGGTCTGCCGGTCGACGGCCAGATGCAGGGCACCT TCGAATTCCCGCAGACTGCGGAATGGATCGATGCTGAGCTCGAGTGGCAGCACAATCGCGGCCAGCTGCTGGTCACCCCG CGGGGTGAGGTAGAGCCTATTCTGGACCTGCCGTGGGAGATCACCCCGGAGCGGATCACCATCAGCGACGGCCGCTGGCG CACCCGTTACGAGGCGTATCCGCTGCGCGGGCGGGTGGCGCTGTCGGTGGGTAACTGGCAGCAGGGCACCGAACAGATGA TCGTCAGCGGTCGCCTGAATGTTCTCACCGAGGGTCATGCCGGGAAGGGCAATGCGGTACTGAATATTGGTCCGGGCAAG CTGAGCATGGATAACAGCGATCTGCCGCTGCGGCTCACCGGCGAGGCCAAGCTGGGGGAGATGATACTATACGCGGCGCT GCCGGCTCAGCTCAGCGGGCCGCTGATCAGCCCGCAGTTGGCTTTTCACCCCGGTGCGTTGCTGCGTTCGCGCGGGCGGG TGATCGACGCGCTGAATATTGACGAAATCCGCTGGCCGCTGGCCGGGGTAAAGGTCACCCAGCAGGGCGTCGATGGCCGC CTGCAGGCGATCCTTCGCGCCCATGAGCAGCAGATGGGCGACTTTACGCTGCATCTGGACGGTCAGGCGAGCGATTTTCT GCCCGACAGCGGCCGCTGGCAGTGGCGCTACTGGGGCGAGGGACATTTTACCCCGATGCAGGCGCGCTGGGATGTGAAGG GCAGCGGGGAGTGGCGCGACAATGCTATTACCCTGAGCAGCCTCTCCACCGGCTTCGATAAGCTTGAGTACGGCACAATG CGGGTCAGCACCCCGCGTCTGACCCTCGAGCAGCCGATCCGCTGGCTGCGTGATGCTGAGCATCCGCGGTTGACCGGCGC GCTGTCGCTGGACGCCGCCAAAACCACCTTCTCCGGCGGCAGCTATCTCCCGGCCTCAACGCTGAAATTCGCCCTCGACG GTCGGGACCCGACGTGGTTCCAGTTCACCGGCGCCCTGCATGCCGAGGCTATCGGTCCGGTGCGTCTGTCCGGGCGCTGG GACGGCGAACGGCTGCGCGGCCAGGCGTGGTGGCCAAAACAGTCGCTAACGGTGTTCCAGCCGCTGGTGCCGCCGGACTG GAAGATGAACCTGCGTGAAGGCAGTCTCTACGCGCAGGTGGCCTTCTCGGCGGCAGCCGGGCAGGGATTTGAGGCGGGCG GCCATGGCGTCCTGAAGGGCGGCAGCGCCTGGATGCCGGATAACCAGATCAACGGCGTCGATTTCGTCCTGCCGTTCCGC TTCAGCGACGGTCACTGGCAGCTGGGCATCCGCCGCCCGGTCTCCCTGCGCATTGGCGAAATCGTCAACCAGGTCACCGC GCGTAATCTGACGGCGGACCTGCAGGGCACCTGGCCGTGGAGCGAGGCCAATCCGCTGCAGCTCAGCGACGTCAGCGTCG ATCTGTTAGGCGGGAAACTGACGCTGCTGCAGCTGCGTATGCCGCAGCGCGACCCGGCGTTGATCCGCCTGCAGCATATC TCCAGCAGCGAACTGACCAGCGCCGTCAAGGTGAAACAGTTCGCCATGTCCGGCGCGGTGAGCGGCGCGTTGCCGCTGTG GCTGGAGAATAATCAATGGATCATCCACGACGGCTGGCTGCGCAATGACGGACCGATGACCCTGCGGCTGGATAAAGACA CCGCCGATGCGCTGGTGGCGGATAACGTCTCCGCCGGGGCGGCGATTAACTGGCTGCGCTATATGGAAATCTCCCGCTCG TGGACGCAGATTAACCTCGATAATCTGGGCGTGTTGACGCTTAAGGCCAGCATCAACGGCACCAGCCGGGTGGAAGGGAA AAGCAGTACCGTGCATTTAAACTACGCTCATGAAGAGAATATTTTCGACCTGTGGCGCAGCTTGCGCTTCGGCGACAATT TACAGGCGTGGCTCGAGCAGAATGCTACGCTGCCCGTACGGCGCTGTACGGACGGTAAGACATGTAAGGAACCTAAATGA
Upstream 100 bases:
>100_bases CTATGCTTTAACAGGCCGTAAACTTTCACTCACTGGTCGAACGTGTCACAATGGACGCCTTTCGGCTTTTACTTATGTTG AATCAGGATATTAACTGCCC
Downstream 100 bases:
>100_bases AGAAGCTGTTACTGGCCATGGTGGCGTCGATGCTGCTCGCCGGCTGTACGCCGCGCATCGAAATCGCGGCGTCGAAAGAG CCCATCACCATCAATATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 879; Mature: 879
Protein sequence:
>879_residues MKGKYKAAIALVLVLVLLPLTLLLTLTHWVPTLAGIWLPVGTRISLQESPRLTRSALLIPDLRYLVGDCEIARVTDARLS RPSRWRLHIGQLEINSACLSKLPASDPSPGSPRTLAEWQSMLPYSWLTIDNLRLSPWEKWQGRLVMSLTPAQQDIGFAGK ELSLQARLRGQALTVSQFSARLTDDQPPVKLVGTFHLPLVPDGLPVDGQMQGTFEFPQTAEWIDAELEWQHNRGQLLVTP RGEVEPILDLPWEITPERITISDGRWRTRYEAYPLRGRVALSVGNWQQGTEQMIVSGRLNVLTEGHAGKGNAVLNIGPGK LSMDNSDLPLRLTGEAKLGEMILYAALPAQLSGPLISPQLAFHPGALLRSRGRVIDALNIDEIRWPLAGVKVTQQGVDGR LQAILRAHEQQMGDFTLHLDGQASDFLPDSGRWQWRYWGEGHFTPMQARWDVKGSGEWRDNAITLSSLSTGFDKLEYGTM RVSTPRLTLEQPIRWLRDAEHPRLTGALSLDAAKTTFSGGSYLPASTLKFALDGRDPTWFQFTGALHAEAIGPVRLSGRW DGERLRGQAWWPKQSLTVFQPLVPPDWKMNLREGSLYAQVAFSAAAGQGFEAGGHGVLKGGSAWMPDNQINGVDFVLPFR FSDGHWQLGIRRPVSLRIGEIVNQVTARNLTADLQGTWPWSEANPLQLSDVSVDLLGGKLTLLQLRMPQRDPALIRLQHI SSSELTSAVKVKQFAMSGAVSGALPLWLENNQWIIHDGWLRNDGPMTLRLDKDTADALVADNVSAGAAINWLRYMEISRS WTQINLDNLGVLTLKASINGTSRVEGKSSTVHLNYAHEENIFDLWRSLRFGDNLQAWLEQNATLPVRRCTDGKTCKEPK
Sequences:
>Translated_879_residues MKGKYKAAIALVLVLVLLPLTLLLTLTHWVPTLAGIWLPVGTRISLQESPRLTRSALLIPDLRYLVGDCEIARVTDARLS RPSRWRLHIGQLEINSACLSKLPASDPSPGSPRTLAEWQSMLPYSWLTIDNLRLSPWEKWQGRLVMSLTPAQQDIGFAGK ELSLQARLRGQALTVSQFSARLTDDQPPVKLVGTFHLPLVPDGLPVDGQMQGTFEFPQTAEWIDAELEWQHNRGQLLVTP RGEVEPILDLPWEITPERITISDGRWRTRYEAYPLRGRVALSVGNWQQGTEQMIVSGRLNVLTEGHAGKGNAVLNIGPGK LSMDNSDLPLRLTGEAKLGEMILYAALPAQLSGPLISPQLAFHPGALLRSRGRVIDALNIDEIRWPLAGVKVTQQGVDGR LQAILRAHEQQMGDFTLHLDGQASDFLPDSGRWQWRYWGEGHFTPMQARWDVKGSGEWRDNAITLSSLSTGFDKLEYGTM RVSTPRLTLEQPIRWLRDAEHPRLTGALSLDAAKTTFSGGSYLPASTLKFALDGRDPTWFQFTGALHAEAIGPVRLSGRW DGERLRGQAWWPKQSLTVFQPLVPPDWKMNLREGSLYAQVAFSAAAGQGFEAGGHGVLKGGSAWMPDNQINGVDFVLPFR FSDGHWQLGIRRPVSLRIGEIVNQVTARNLTADLQGTWPWSEANPLQLSDVSVDLLGGKLTLLQLRMPQRDPALIRLQHI SSSELTSAVKVKQFAMSGAVSGALPLWLENNQWIIHDGWLRNDGPMTLRLDKDTADALVADNVSAGAAINWLRYMEISRS WTQINLDNLGVLTLKASINGTSRVEGKSSTVHLNYAHEENIFDLWRSLRFGDNLQAWLEQNATLPVRRCTDGKTCKEPK >Mature_879_residues MKGKYKAAIALVLVLVLLPLTLLLTLTHWVPTLAGIWLPVGTRISLQESPRLTRSALLIPDLRYLVGDCEIARVTDARLS RPSRWRLHIGQLEINSACLSKLPASDPSPGSPRTLAEWQSMLPYSWLTIDNLRLSPWEKWQGRLVMSLTPAQQDIGFAGK ELSLQARLRGQALTVSQFSARLTDDQPPVKLVGTFHLPLVPDGLPVDGQMQGTFEFPQTAEWIDAELEWQHNRGQLLVTP RGEVEPILDLPWEITPERITISDGRWRTRYEAYPLRGRVALSVGNWQQGTEQMIVSGRLNVLTEGHAGKGNAVLNIGPGK LSMDNSDLPLRLTGEAKLGEMILYAALPAQLSGPLISPQLAFHPGALLRSRGRVIDALNIDEIRWPLAGVKVTQQGVDGR LQAILRAHEQQMGDFTLHLDGQASDFLPDSGRWQWRYWGEGHFTPMQARWDVKGSGEWRDNAITLSSLSTGFDKLEYGTM RVSTPRLTLEQPIRWLRDAEHPRLTGALSLDAAKTTFSGGSYLPASTLKFALDGRDPTWFQFTGALHAEAIGPVRLSGRW DGERLRGQAWWPKQSLTVFQPLVPPDWKMNLREGSLYAQVAFSAAAGQGFEAGGHGVLKGGSAWMPDNQINGVDFVLPFR FSDGHWQLGIRRPVSLRIGEIVNQVTARNLTADLQGTWPWSEANPLQLSDVSVDLLGGKLTLLQLRMPQRDPALIRLQHI SSSELTSAVKVKQFAMSGAVSGALPLWLENNQWIIHDGWLRNDGPMTLRLDKDTADALVADNVSAGAAINWLRYMEISRS WTQINLDNLGVLTLKASINGTSRVEGKSSTVHLNYAHEENIFDLWRSLRFGDNLQAWLEQNATLPVRRCTDGKTCKEPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787646, Length=879, Percent_Identity=68.3731513083049, Blast_Score=1239, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021730 [H]
Pfam domain/function: PF11739 DctA-YdbH [H]
EC number: NA
Molecular weight: Translated: 97745; Mature: 97745
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKYKAAIALVLVLVLLPLTLLLTLTHWVPTLAGIWLPVGTRISLQESPRLTRSALLIP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHEEECC DLRYLVGDCEIARVTDARLSRPSRWRLHIGQLEINSACLSKLPASDPSPGSPRTLAEWQS CHHHHHCCCEEEEECHHHCCCCCEEEEEEEEEEECHHHHHHCCCCCCCCCCCCHHHHHHH MLPYSWLTIDNLRLSPWEKWQGRLVMSLTPAQQDIGFAGKELSLQARLRGQALTVSQFSA HCCEEEEEECCCCCCCCHHCCCEEEEEECCCHHHCCCCCCCEEEEEEECCCEEEEEHHHH RLTDDQPPVKLVGTFHLPLVPDGLPVDGQMQGTFEFPQTAEWIDAELEWQHNRGQLLVTP CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCEEEECC RGEVEPILDLPWEITPERITISDGRWRTRYEAYPLRGRVALSVGNWQQGTEQMIVSGRLN CCCCCHHCCCCCEECCCEEEECCCCEEEEEEECCCCCEEEEEECCCCCCCHHEEEECCEE VLTEGHAGKGNAVLNIGPGKLSMDNSDLPLRLTGEAKLGEMILYAALPAQLSGPLISPQL EEECCCCCCCCEEEEECCCEEECCCCCCCEEEECCCCCCCEEEEEECCHHHCCCCCCCCC AFHPGALLRSRGRVIDALNIDEIRWPLAGVKVTQQGVDGRLQAILRAHEQQMGDFTLHLD CCCCCHHHHCCCCEEEECCCCHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC GQASDFLPDSGRWQWRYWGEGHFTPMQARWDVKGSGEWRDNAITLSSLSTGFDKLEYGTM CCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHCCCEE RVSTPRLTLEQPIRWLRDAEHPRLTGALSLDAAKTTFSGGSYLPASTLKFALDGRDPTWF EEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEECCCCCCCCCCEEEEEECCCCCCEE QFTGALHAEAIGPVRLSGRWDGERLRGQAWWPKQSLTVFQPLVPPDWKMNLREGSLYAQV EEECCEECCCCCCEEECCCCCCHHHCCCCCCCCCCCEEEECCCCCCCEEEEECCCEEEEE AFSAAAGQGFEAGGHGVLKGGSAWMPDNQINGVDFVLPFRFSDGHWQLGIRRPVSLRIGE EEEHHCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCEEHHHH IVNQVTARNLTADLQGTWPWSEANPLQLSDVSVDLLGGKLTLLQLRMPQRDPALIRLQHI HHHHHHHCCEEECCCCCCCCCCCCCEEEECCEEEEECCEEEEEEEECCCCCCCEEEEEEC SSSELTSAVKVKQFAMSGAVSGALPLWLENNQWIIHDGWLRNDGPMTLRLDKDTADALVA CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCEECCCCCEEEEECCCCCCEEEE DNVSAGAAINWLRYMEISRSWTQINLDNLGVLTLKASINGTSRVEGKSSTVHLNYAHEEN CCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCCEECCCCCEEEEEECCCCC IFDLWRSLRFGDNLQAWLEQNATLPVRRCTDGKTCKEPK HHHHHHHHCCCCCHHHHHHCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure MKGKYKAAIALVLVLVLLPLTLLLTLTHWVPTLAGIWLPVGTRISLQESPRLTRSALLIP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHEEECC DLRYLVGDCEIARVTDARLSRPSRWRLHIGQLEINSACLSKLPASDPSPGSPRTLAEWQS CHHHHHCCCEEEEECHHHCCCCCEEEEEEEEEEECHHHHHHCCCCCCCCCCCCHHHHHHH MLPYSWLTIDNLRLSPWEKWQGRLVMSLTPAQQDIGFAGKELSLQARLRGQALTVSQFSA HCCEEEEEECCCCCCCCHHCCCEEEEEECCCHHHCCCCCCCEEEEEEECCCEEEEEHHHH RLTDDQPPVKLVGTFHLPLVPDGLPVDGQMQGTFEFPQTAEWIDAELEWQHNRGQLLVTP CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCEEEECC RGEVEPILDLPWEITPERITISDGRWRTRYEAYPLRGRVALSVGNWQQGTEQMIVSGRLN CCCCCHHCCCCCEECCCEEEECCCCEEEEEEECCCCCEEEEEECCCCCCCHHEEEECCEE VLTEGHAGKGNAVLNIGPGKLSMDNSDLPLRLTGEAKLGEMILYAALPAQLSGPLISPQL EEECCCCCCCCEEEEECCCEEECCCCCCCEEEECCCCCCCEEEEEECCHHHCCCCCCCCC AFHPGALLRSRGRVIDALNIDEIRWPLAGVKVTQQGVDGRLQAILRAHEQQMGDFTLHLD CCCCCHHHHCCCCEEEECCCCHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC GQASDFLPDSGRWQWRYWGEGHFTPMQARWDVKGSGEWRDNAITLSSLSTGFDKLEYGTM CCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHCCCEE RVSTPRLTLEQPIRWLRDAEHPRLTGALSLDAAKTTFSGGSYLPASTLKFALDGRDPTWF EEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEECCCCCCCCCCEEEEEECCCCCCEE QFTGALHAEAIGPVRLSGRWDGERLRGQAWWPKQSLTVFQPLVPPDWKMNLREGSLYAQV EEECCEECCCCCCEEECCCCCCHHHCCCCCCCCCCCEEEECCCCCCCEEEEECCCEEEEE AFSAAAGQGFEAGGHGVLKGGSAWMPDNQINGVDFVLPFRFSDGHWQLGIRRPVSLRIGE EEEHHCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCEEHHHH IVNQVTARNLTADLQGTWPWSEANPLQLSDVSVDLLGGKLTLLQLRMPQRDPALIRLQHI HHHHHHHCCEEECCCCCCCCCCCCCEEEECCEEEEECCEEEEEEEECCCCCCCEEEEEEC SSSELTSAVKVKQFAMSGAVSGALPLWLENNQWIIHDGWLRNDGPMTLRLDKDTADALVA CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCEECCCCCEEEEECCCCCCEEEE DNVSAGAAINWLRYMEISRSWTQINLDNLGVLTLKASINGTSRVEGKSSTVHLNYAHEEN CCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCCEECCCCCEEEEEECCCCC IFDLWRSLRFGDNLQAWLEQNATLPVRRCTDGKTCKEPK HHHHHHHHCCCCCHHHHHHCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 9025293 [H]