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The map label for this gene is yxxF [H]

Identifier: 150398735

GI number: 150398735

Start: 3757797

End: 3758705

Strand: Reverse

Name: yxxF [H]

Synonym: Smed_3552

Alternate gene names: 150398735

Gene position: 3758705-3757797 (Counterclockwise)

Preceding gene: 150398737

Following gene: 150398733

Centisome position: 99.39

GC content: 61.83

Gene sequence:

>909_bases
ATGGATAGGGATTTGCGACGCGGAAGCGTGGAAATGACGGCTGCCATGCTGATTTCGGGAACGATCGGCTGGTTTGTGCT
GATGTCGGGGCAGCCTGTGGCGGGTGTCGTCTTCTGGCGTTGCGTGTTCGGCGCCGCGACGCTTGCCGTGCTTGCGGCAT
TTTTCGGCCTCATCGACCTCAAGCACCTGCGGATGAAGGTCATCTTGCTTTCGGCGTTGGGCGGCGTCGCGATCGTCCTG
AACTGGCTACTGCTCTTCGCCGCCTATCCCCGCGCTTCTATCTCCATTGCCACGATGGTCTACAACACGCAGCCCTTCAT
GCTGCTCGGGCTTGGTGCGATCTTTCTCGGAGAGAAGATCACCGCCAGCAAGCTTCTATGGCTCTCGCTCTCCTTCGCAG
GCATGGTCGCGATTGTCTCCGCCGAGCCCGCGGGTGGCTACGAGCCAGTCGATTATCTCACCGGAATAGCACTGTCGCTC
GGTGCCGCATTCTTCTATGCCATCGCTGCGCTCGTCACCAAGCTCCTCAAGGGCACGCCGCCGCATCTGATCGCGCTGGT
ACAGGTCATAACCGGAGCGGCCATGCTCGCTCCCTTCGCCCTTGCCGCGCCGCTGCCGCAGGGAACGCTCCAGTGGACGC
TCCTCTTGACCGTGGGGGTGGTCCACACGGGCATCATGTATATCCTGCTTTACGGCGCCATTCAGAAGCTGCCGACCCAC
ATGACGGGCGCCCTTTCCTTCATCTATCCGATCGCTGCGATCCTGGTCGACCGCATCGCATTCGGCCACGCCTTACAGCC
GGCGCAGATCGCAGGCTCGATCGCGATCCTCATTGCAGCCGCGGGCACAAATCTCGGCTGGACCCTCCGGCCACCGTCGG
CCAAGCGTGGATTGAAACGGCAAGCCTAA

Upstream 100 bases:

>100_bases
TTTCACATTCAGCCATACTCCCATGTCTTCCTACAAATATCCATATATCCACGCGAACAGGCTCATTATTCTTGCGACAC
AAGTAGAAGGAGCCAAGGTC

Downstream 100 bases:

>100_bases
ATCGTTGGAAGTGATCGCTTTACGCACTTCCGGACGGAAAACCGTTACACACTTTTCCTGGAAGTGCTTTAACGCCGTGC
CTCAGCGGCGATGCTGATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MDRDLRRGSVEMTAAMLISGTIGWFVLMSGQPVAGVVFWRCVFGAATLAVLAAFFGLIDLKHLRMKVILLSALGGVAIVL
NWLLLFAAYPRASISIATMVYNTQPFMLLGLGAIFLGEKITASKLLWLSLSFAGMVAIVSAEPAGGYEPVDYLTGIALSL
GAAFFYAIAALVTKLLKGTPPHLIALVQVITGAAMLAPFALAAPLPQGTLQWTLLLTVGVVHTGIMYILLYGAIQKLPTH
MTGALSFIYPIAAILVDRIAFGHALQPAQIAGSIAILIAAAGTNLGWTLRPPSAKRGLKRQA

Sequences:

>Translated_302_residues
MDRDLRRGSVEMTAAMLISGTIGWFVLMSGQPVAGVVFWRCVFGAATLAVLAAFFGLIDLKHLRMKVILLSALGGVAIVL
NWLLLFAAYPRASISIATMVYNTQPFMLLGLGAIFLGEKITASKLLWLSLSFAGMVAIVSAEPAGGYEPVDYLTGIALSL
GAAFFYAIAALVTKLLKGTPPHLIALVQVITGAAMLAPFALAAPLPQGTLQWTLLLTVGVVHTGIMYILLYGAIQKLPTH
MTGALSFIYPIAAILVDRIAFGHALQPAQIAGSIAILIAAAGTNLGWTLRPPSAKRGLKRQA
>Mature_302_residues
MDRDLRRGSVEMTAAMLISGTIGWFVLMSGQPVAGVVFWRCVFGAATLAVLAAFFGLIDLKHLRMKVILLSALGGVAIVL
NWLLLFAAYPRASISIATMVYNTQPFMLLGLGAIFLGEKITASKLLWLSLSFAGMVAIVSAEPAGGYEPVDYLTGIALSL
GAAFFYAIAALVTKLLKGTPPHLIALVQVITGAAMLAPFALAAPLPQGTLQWTLLLTVGVVHTGIMYILLYGAIQKLPTH
MTGALSFIYPIAAILVDRIAFGHALQPAQIAGSIAILIAAAGTNLGWTLRPPSAKRGLKRQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31870; Mature: 31870

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRDLRRGSVEMTAAMLISGTIGWFVLMSGQPVAGVVFWRCVFGAATLAVLAAFFGLIDL
CCCCCCCCCHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHLRMKVILLSALGGVAIVLNWLLLFAAYPRASISIATMVYNTQPFMLLGLGAIFLGEKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCH
TASKLLWLSLSFAGMVAIVSAEPAGGYEPVDYLTGIALSLGAAFFYAIAALVTKLLKGTP
HHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PHLIALVQVITGAAMLAPFALAAPLPQGTLQWTLLLTVGVVHTGIMYILLYGAIQKLPTH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTGALSFIYPIAAILVDRIAFGHALQPAQIAGSIAILIAAAGTNLGWTLRPPSAKRGLKR
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEEEECCCCCCEEECCCHHHCCCCC
QA
CC
>Mature Secondary Structure
MDRDLRRGSVEMTAAMLISGTIGWFVLMSGQPVAGVVFWRCVFGAATLAVLAAFFGLIDL
CCCCCCCCCHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHLRMKVILLSALGGVAIVLNWLLLFAAYPRASISIATMVYNTQPFMLLGLGAIFLGEKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCH
TASKLLWLSLSFAGMVAIVSAEPAGGYEPVDYLTGIALSLGAAFFYAIAALVTKLLKGTP
HHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PHLIALVQVITGAAMLAPFALAAPLPQGTLQWTLLLTVGVVHTGIMYILLYGAIQKLPTH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTGALSFIYPIAAILVDRIAFGHALQPAQIAGSIAILIAAAGTNLGWTLRPPSAKRGLKR
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEEEECCCCCCEEECCCHHHCCCCC
QA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704263; 9384377; 8316082 [H]