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The map label for this gene is yadS [C]

Identifier: 150398638

GI number: 150398638

Start: 3660796

End: 3661431

Strand: Reverse

Name: yadS [C]

Synonym: Smed_3452

Alternate gene names: 150398638

Gene position: 3661431-3660796 (Counterclockwise)

Preceding gene: 150398639

Following gene: 150398636

Centisome position: 96.81

GC content: 65.09

Gene sequence:

>636_bases
ATGCCGATCCTCGAATTCCTCGACTATGCGGGCGTCGCCGTCTTCGCGGCGACGGGAGCGCTTTCGGCTTCCCGCAAGCA
GCTCGACATTATCGGTTATCTGTTTCTCGCTTCCGCGACCGGCATTGGCGGCGGGACCATTCGGGATCTCGTTCTCGGCG
TGACGCCGGTGTTCTGGGTAGTGAACCCCAACTTCATCATCGTCTGCGCGGCAGTGGCCATCGCCGTCTTCCTGACGTCG
CACCTTCTCGAGTCACGCTATCGCCTGCTCGTATGGCTCGATGCGATGGGTCTTTCCGCCTATTGCGTCATGGGCGCGGC
GAAGGGACTGGCTGCGACGGGTTCGCCGATCGTCGCCCTCGTCACGGGCACTCTGACGGCAACCTTCGGCGGCGTCCTGC
GTGATCTGCTGGCCGGAGAACCTTCCGTCCTGTTGCGGCCGGAGATCTATGTGAGCGCCGCCCTCATCGGAGCCTCCGCC
TTCGTGCTCGCAAGCATGCTCGGATTGCCGCTGGCGGTGGCGTCCGCACTGGGTGTGCTCACGGCCTTTGCCGTGCGCGG
CGGTGCGCTTCGATACGGGTGGATGCTGCCGACCGGGAAAGCCGGTCCCGGCCGCGATCCGGACGACGTGATGTGA

Upstream 100 bases:

>100_bases
CCGCGTTAGCCTGCCGCATGTTTTCGAAGGTGACGTTTAGAGCCTTTCCTGTCTGAGGGGAAAAGTTCTAGAGAGGGGCG
TAAAGCAAAGCGGAGCAGCC

Downstream 100 bases:

>100_bases
TGAGATTGGTTTGACGGAGAAAGAGGATCGAAGGCTCAGCGCTCGACCTTATGGCGCAGCCGGATCACCACGTCGACATG
GGAGATTTCCATCCCTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MPILEFLDYAGVAVFAATGALSASRKQLDIIGYLFLASATGIGGGTIRDLVLGVTPVFWVVNPNFIIVCAAVAIAVFLTS
HLLESRYRLLVWLDAMGLSAYCVMGAAKGLAATGSPIVALVTGTLTATFGGVLRDLLAGEPSVLLRPEIYVSAALIGASA
FVLASMLGLPLAVASALGVLTAFAVRGGALRYGWMLPTGKAGPGRDPDDVM

Sequences:

>Translated_211_residues
MPILEFLDYAGVAVFAATGALSASRKQLDIIGYLFLASATGIGGGTIRDLVLGVTPVFWVVNPNFIIVCAAVAIAVFLTS
HLLESRYRLLVWLDAMGLSAYCVMGAAKGLAATGSPIVALVTGTLTATFGGVLRDLLAGEPSVLLRPEIYVSAALIGASA
FVLASMLGLPLAVASALGVLTAFAVRGGALRYGWMLPTGKAGPGRDPDDVM
>Mature_210_residues
PILEFLDYAGVAVFAATGALSASRKQLDIIGYLFLASATGIGGGTIRDLVLGVTPVFWVVNPNFIIVCAAVAIAVFLTSH
LLESRYRLLVWLDAMGLSAYCVMGAAKGLAATGSPIVALVTGTLTATFGGVLRDLLAGEPSVLLRPEIYVSAALIGASAF
VLASMLGLPLAVASALGVLTAFAVRGGALRYGWMLPTGKAGPGRDPDDVM

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=198, Percent_Identity=37.8787878787879, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI87082304, Length=160, Percent_Identity=33.125, Blast_Score=103, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 21643; Mature: 21512

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILEFLDYAGVAVFAATGALSASRKQLDIIGYLFLASATGIGGGTIRDLVLGVTPVFWV
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEE
VNPNFIIVCAAVAIAVFLTSHLLESRYRLLVWLDAMGLSAYCVMGAAKGLAATGSPIVAL
ECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHCHHHHHHHHHHCCCCCCCCCEEEE
VTGTLTATFGGVLRDLLAGEPSVLLRPEIYVSAALIGASAFVLASMLGLPLAVASALGVL
EHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAFAVRGGALRYGWMLPTGKAGPGRDPDDVM
HHHHHCCCCEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PILEFLDYAGVAVFAATGALSASRKQLDIIGYLFLASATGIGGGTIRDLVLGVTPVFWV
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEE
VNPNFIIVCAAVAIAVFLTSHLLESRYRLLVWLDAMGLSAYCVMGAAKGLAATGSPIVAL
ECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHCHHHHHHHHHHCCCCCCCCCEEEE
VTGTLTATFGGVLRDLLAGEPSVLLRPEIYVSAALIGASAFVLASMLGLPLAVASALGVL
EHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAFAVRGGALRYGWMLPTGKAGPGRDPDDVM
HHHHHCCCCEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301; 1741267 [H]