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The map label for this gene is ycbC [C]

Identifier: 150398639

GI number: 150398639

Start: 3661523

End: 3662311

Strand: Reverse

Name: ycbC [C]

Synonym: Smed_3453

Alternate gene names: 150398639

Gene position: 3662311-3661523 (Counterclockwise)

Preceding gene: 150398641

Following gene: 150398638

Centisome position: 96.84

GC content: 64.01

Gene sequence:

>789_bases
ATGTTCCTCGTTTCCAAAATCTTCTGGCTCGTCGCCCAGCCGCTATCACTCGCCTTTCTCATGCTGCTCGTCGGCGTGCT
GCTCATGCTCACCCGCTTCCGTCGAACGGGTGGCGGTATCAGCGTCTTCGGGCTCGCCGTGCTTTTCATCACTCTCTTCA
CCACGGCCGGCTCCTATTTCCTGCAGATCCTGGAGGATCGCTTTCCCCGCCCCTCGCCGGAGCCGGCGGAGCTTGCCTGC
ATGATCGTGCTTGGCGGCGCCTTCGAGAATGTGGTCATGGCGAGCCGCGGCGGCATCGAGATGAATCAGGCGGCGGAGCG
TTTCGTCGAGACCCTGAGGCTGGCGCGGGCCCATCCGGGGGCGCGCATCCTCGTATCCGGAGGCGACGGCTCGCTCAGCG
GCATCTACGAGGGCGACGCGCATGCCTCTGCAGCTTTTTTCGGGACCTTCGGCATCGGCCCGGAGCGCCTGATCCGTGAG
GGAGAATCGCGGACGACCTTCGAAAACGCCCGCAATACACGGCACCTCCTCCGGGAAAACGGGCTCGATCGTTGCGCGCT
CGTGACCTCGGCCTATCATATGCCCCGTTCTGTGGGCCTCTTTCGCGCGAACGACATCGAGGTGACGCCCTGGCCGGTGG
ATTACCGTACGAGCGGCAAGGTGCGGCTCGGCGTGGATTTCACCCAGCCATCACTCAATGCCCAATTGGCGACGACGGCC
GCCAAGGAATGGACCGGACTGCTCGCCTATTATCTTCTCGGCCGGACGCAGACGCTGCTGCCGCGTTAG

Upstream 100 bases:

>100_bases
TTCGTCGCGTTCGGTGGCTGTTCAAGCTTCATCAGAACGCGCAGAATTCGCAGCCTCCGTAGATGAAATCTTAACCCGCA
TCTGCTGAGAAACTGGAAGC

Downstream 100 bases:

>100_bases
CCTGCCGCATGTTTTCGAAGGTGACGTTTAGAGCCTTTCCTGTCTGAGGGGAAAAGTTCTAGAGAGGGGCGTAAAGCAAA
GCGGAGCAGCCATGCCGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MFLVSKIFWLVAQPLSLAFLMLLVGVLLMLTRFRRTGGGISVFGLAVLFITLFTTAGSYFLQILEDRFPRPSPEPAELAC
MIVLGGAFENVVMASRGGIEMNQAAERFVETLRLARAHPGARILVSGGDGSLSGIYEGDAHASAAFFGTFGIGPERLIRE
GESRTTFENARNTRHLLRENGLDRCALVTSAYHMPRSVGLFRANDIEVTPWPVDYRTSGKVRLGVDFTQPSLNAQLATTA
AKEWTGLLAYYLLGRTQTLLPR

Sequences:

>Translated_262_residues
MFLVSKIFWLVAQPLSLAFLMLLVGVLLMLTRFRRTGGGISVFGLAVLFITLFTTAGSYFLQILEDRFPRPSPEPAELAC
MIVLGGAFENVVMASRGGIEMNQAAERFVETLRLARAHPGARILVSGGDGSLSGIYEGDAHASAAFFGTFGIGPERLIRE
GESRTTFENARNTRHLLRENGLDRCALVTSAYHMPRSVGLFRANDIEVTPWPVDYRTSGKVRLGVDFTQPSLNAQLATTA
AKEWTGLLAYYLLGRTQTLLPR
>Mature_262_residues
MFLVSKIFWLVAQPLSLAFLMLLVGVLLMLTRFRRTGGGISVFGLAVLFITLFTTAGSYFLQILEDRFPRPSPEPAELAC
MIVLGGAFENVVMASRGGIEMNQAAERFVETLRLARAHPGARILVSGGDGSLSGIYEGDAHASAAFFGTFGIGPERLIRE
GESRTTFENARNTRHLLRENGLDRCALVTSAYHMPRSVGLFRANDIEVTPWPVDYRTSGKVRLGVDFTQPSLNAQLATTA
AKEWTGLLAYYLLGRTQTLLPR

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28746; Mature: 28746

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLVSKIFWLVAQPLSLAFLMLLVGVLLMLTRFRRTGGGISVFGLAVLFITLFTTAGSYF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LQILEDRFPRPSPEPAELACMIVLGGAFENVVMASRGGIEMNQAAERFVETLRLARAHPG
HHHHHHHCCCCCCCHHHEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
ARILVSGGDGSLSGIYEGDAHASAAFFGTFGIGPERLIREGESRTTFENARNTRHLLREN
CEEEEECCCCCCCCEECCCCCCCHHEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHC
GLDRCALVTSAYHMPRSVGLFRANDIEVTPWPVDYRTSGKVRLGVDFTQPSLNAQLATTA
CCCHHHHHHHHHHCCCCCCEEECCCEEECCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
AKEWTGLLAYYLLGRTQTLLPR
HHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MFLVSKIFWLVAQPLSLAFLMLLVGVLLMLTRFRRTGGGISVFGLAVLFITLFTTAGSYF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LQILEDRFPRPSPEPAELACMIVLGGAFENVVMASRGGIEMNQAAERFVETLRLARAHPG
HHHHHHHCCCCCCCHHHEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
ARILVSGGDGSLSGIYEGDAHASAAFFGTFGIGPERLIREGESRTTFENARNTRHLLREN
CEEEEECCCCCCCCEECCCCCCCHHEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHC
GLDRCALVTSAYHMPRSVGLFRANDIEVTPWPVDYRTSGKVRLGVDFTQPSLNAQLATTA
CCCHHHHHHHHHHCCCCCCEEECCCEEECCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
AKEWTGLLAYYLLGRTQTLLPR
HHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA