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The map label for this gene is 150398580

Identifier: 150398580

GI number: 150398580

Start: 3597180

End: 3598046

Strand: Reverse

Name: 150398580

Synonym: Smed_3391

Alternate gene names: NA

Gene position: 3598046-3597180 (Counterclockwise)

Preceding gene: 150398581

Following gene: 150398576

Centisome position: 95.14

GC content: 63.21

Gene sequence:

>867_bases
ATGCCGGCCGGAACCGCGCTCGAAAGCCTGCTGCGACGGGACCGCGCGATCGTGGCAGCATCTATCGCCGCATTGGCGGT
GATCGCCTGGATCTACACTCTTTGGCTGGCCGCAGCCATGGATACAGACGGCATGAGCGTGTCCGGGTCGGGCATGGAGA
TGAACCCCGCCCTGAAAATGGACGGGATGGGGCACGGCGGGACCGATCCGCTCGACGCCGTTTTGGGCATCTCGCCGCGT
CCCTGGAGCTTTATCGAAGCTGGCGTCACCTTCACCATGTGGACCGTTATGATGGTCGGCATGATGCTGCCTTCGGCAAC
GCCGATGATCCTGCTCTATGCCCGGGTCGGCCGGCAAAGCCGAAAGGAGGACAAGCCTTTCGCCGCGACAGGTTTCTTTG
CCGGGGGCTATCTCCTGGCCTGGGCGGGGTTTGCGCTCGTTGCAACGCTCGGACAGTGGCTCCTGGAGGGGACCTTGCTG
ACGCCGGCGCTGGCAAGCGCCAGTGGCGTCTTCAGCGGCGTGGTACTGGTGACTGCAGGTCTTTACCAGTGGACGCCGCT
CAAGGATGCCTGCCTCAGCCAGTGCCAGACGCCTATCGTGTTCCTGCATCGCAACGGCGGTTTCCGCCGGGACCCCGGGG
GAGCCACGAGACTTGGCTTTCGCCATGGGCTTTATTGCGTCGGCTGCTGCTGGGCGCTGATGGCGCTTCTTTTCGTCGGC
GGCATCATGAATGTGCTTTGGATTGCAGCCATTGCCATATTCGTGCTGGCAGAAAAGGTGTTTTTCCCGAACCGGACCCT
CTCCCGCCTCGCGGGCACCGTGCTCCTGGCGTTAGGTGGCTGGCAATTGGCTGCGGCGGCAATATAG

Upstream 100 bases:

>100_bases
CTGGGCCGAGACAAGCGGACCGCTCGCACTCTCACTCGCCGATTCTCACGCCCATTTCGCCAGCCTGCACATAACCGGAA
GCGGCGTGGTTCACTGACCC

Downstream 100 bases:

>100_bases
GCGGACGGGTGCGCTGCACGGCCGACTGCCGCAAGCGGGGCGAAGGGGACTCGCGGCGCCACCTGAACCCACCTCACCGC
CCGATCGAAAAAGCGAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MPAGTALESLLRRDRAIVAASIAALAVIAWIYTLWLAAAMDTDGMSVSGSGMEMNPALKMDGMGHGGTDPLDAVLGISPR
PWSFIEAGVTFTMWTVMMVGMMLPSATPMILLYARVGRQSRKEDKPFAATGFFAGGYLLAWAGFALVATLGQWLLEGTLL
TPALASASGVFSGVVLVTAGLYQWTPLKDACLSQCQTPIVFLHRNGGFRRDPGGATRLGFRHGLYCVGCCWALMALLFVG
GIMNVLWIAAIAIFVLAEKVFFPNRTLSRLAGTVLLALGGWQLAAAAI

Sequences:

>Translated_288_residues
MPAGTALESLLRRDRAIVAASIAALAVIAWIYTLWLAAAMDTDGMSVSGSGMEMNPALKMDGMGHGGTDPLDAVLGISPR
PWSFIEAGVTFTMWTVMMVGMMLPSATPMILLYARVGRQSRKEDKPFAATGFFAGGYLLAWAGFALVATLGQWLLEGTLL
TPALASASGVFSGVVLVTAGLYQWTPLKDACLSQCQTPIVFLHRNGGFRRDPGGATRLGFRHGLYCVGCCWALMALLFVG
GIMNVLWIAAIAIFVLAEKVFFPNRTLSRLAGTVLLALGGWQLAAAAI
>Mature_287_residues
PAGTALESLLRRDRAIVAASIAALAVIAWIYTLWLAAAMDTDGMSVSGSGMEMNPALKMDGMGHGGTDPLDAVLGISPRP
WSFIEAGVTFTMWTVMMVGMMLPSATPMILLYARVGRQSRKEDKPFAATGFFAGGYLLAWAGFALVATLGQWLLEGTLLT
PALASASGVFSGVVLVTAGLYQWTPLKDACLSQCQTPIVFLHRNGGFRRDPGGATRLGFRHGLYCVGCCWALMALLFVGG
IMNVLWIAAIAIFVLAEKVFFPNRTLSRLAGTVLLALGGWQLAAAAI

Specific function: Unknown

COG id: COG5486

COG function: function code S; Predicted metal-binding integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30552; Mature: 30420

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS00116 DNA_POLYMERASE_B

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAGTALESLLRRDRAIVAASIAALAVIAWIYTLWLAAAMDTDGMSVSGSGMEMNPALKM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEE
DGMGHGGTDPLDAVLGISPRPWSFIEAGVTFTMWTVMMVGMMLPSATPMILLYARVGRQS
CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
RKEDKPFAATGFFAGGYLLAWAGFALVATLGQWLLEGTLLTPALASASGVFSGVVLVTAG
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LYQWTPLKDACLSQCQTPIVFLHRNGGFRRDPGGATRLGFRHGLYCVGCCWALMALLFVG
CCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHH
GIMNVLWIAAIAIFVLAEKVFFPNRTLSRLAGTVLLALGGWQLAAAAI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure 
PAGTALESLLRRDRAIVAASIAALAVIAWIYTLWLAAAMDTDGMSVSGSGMEMNPALKM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEE
DGMGHGGTDPLDAVLGISPRPWSFIEAGVTFTMWTVMMVGMMLPSATPMILLYARVGRQS
CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
RKEDKPFAATGFFAGGYLLAWAGFALVATLGQWLLEGTLLTPALASASGVFSGVVLVTAG
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LYQWTPLKDACLSQCQTPIVFLHRNGGFRRDPGGATRLGFRHGLYCVGCCWALMALLFVG
CCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHH
GIMNVLWIAAIAIFVLAEKVFFPNRTLSRLAGTVLLALGGWQLAAAAI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA