Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

Click here to switch to the map view.

The map label for this gene is 150398581

Identifier: 150398581

GI number: 150398581

Start: 3598050

End: 3598685

Strand: Reverse

Name: 150398581

Synonym: Smed_3392

Alternate gene names: NA

Gene position: 3598685-3598050 (Counterclockwise)

Preceding gene: 150398582

Following gene: 150398580

Centisome position: 95.16

GC content: 62.74

Gene sequence:

>636_bases
ATGACGGACGTCGAGTGGACGATCAAGGGTCGGGAATTCATCCATTGCAACTGCGCCTATGGCTGCCCGTGCCAGTTCAA
TGCCCTGCCGACCGAGGGGCATTGCAGCGCGATCGGCCTGATCGATATCGATGAGGGAAACCATGGCGACACCCGGCTCG
ACGGCCTGAGGTGCGGCATGATCATCTCCTGGCCCGGTGCGATTCACGAGGGCAGGGGTGCTGTGGTTCCCATTATCGAC
GAACGCGCCTCGGACGAGCAGCGGGAGGCGCTGCTGCGGATCATGAGCGGTCAGGATACCGAGCCCGGCGCCACCTTCTT
CCAGGTCTTCGCGACGACTTTCGAGACCTTTCATGATCCGGTTTTCGCGCCGATCGATTTCGAGATCGACGTCCAAGGGC
GCGCGGCACGCGTCAACATACCCGGCTGGATCGAAGCCCGCGGCGAGCCCATCGTCAATCCGGTCACGGGAGAACAGCAT
CGCGCCCGCATCAACCTTCCGAACGGCTTCGAATATGACCATTGCGAGGTCGGGCGCGGCTGGGCCGAGACAAGCGGACC
GCTCGCACTCTCACTCGCCGATTCTCACGCCCATTTCGCCAGCCTGCACATAACCGGAAGCGGCGTGGTTCACTGA

Upstream 100 bases:

>100_bases
GTGGCCCGTTGGCATCGCCGGCGGTAGGGAGTATATTTTCACCACCTAATAGAATCGCATCCGAAGGAAAATGAACTCCA
TCGTATCTGGGGAGGAGACG

Downstream 100 bases:

>100_bases
CCCATGCCGGCCGGAACCGCGCTCGAAAGCCTGCTGCGACGGGACCGCGCGATCGTGGCAGCATCTATCGCCGCATTGGC
GGTGATCGCCTGGATCTACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTDVEWTIKGREFIHCNCAYGCPCQFNALPTEGHCSAIGLIDIDEGNHGDTRLDGLRCGMIISWPGAIHEGRGAVVPIID
ERASDEQREALLRIMSGQDTEPGATFFQVFATTFETFHDPVFAPIDFEIDVQGRAARVNIPGWIEARGEPIVNPVTGEQH
RARINLPNGFEYDHCEVGRGWAETSGPLALSLADSHAHFASLHITGSGVVH

Sequences:

>Translated_211_residues
MTDVEWTIKGREFIHCNCAYGCPCQFNALPTEGHCSAIGLIDIDEGNHGDTRLDGLRCGMIISWPGAIHEGRGAVVPIID
ERASDEQREALLRIMSGQDTEPGATFFQVFATTFETFHDPVFAPIDFEIDVQGRAARVNIPGWIEARGEPIVNPVTGEQH
RARINLPNGFEYDHCEVGRGWAETSGPLALSLADSHAHFASLHITGSGVVH
>Mature_210_residues
TDVEWTIKGREFIHCNCAYGCPCQFNALPTEGHCSAIGLIDIDEGNHGDTRLDGLRCGMIISWPGAIHEGRGAVVPIIDE
RASDEQREALLRIMSGQDTEPGATFFQVFATTFETFHDPVFAPIDFEIDVQGRAARVNIPGWIEARGEPIVNPVTGEQHR
ARINLPNGFEYDHCEVGRGWAETSGPLALSLADSHAHFASLHITGSGVVH

Specific function: Unknown

COG id: COG5588

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23046; Mature: 22915

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVEWTIKGREFIHCNCAYGCPCQFNALPTEGHCSAIGLIDIDEGNHGDTRLDGLRCGM
CCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEECCEEEEE
IISWPGAIHEGRGAVVPIIDERASDEQREALLRIMSGQDTEPGATFFQVFATTFETFHDP
EEECCCCEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
VFAPIDFEIDVQGRAARVNIPGWIEARGEPIVNPVTGEQHRARINLPNGFEYDHCEVGRG
EECCCEEEEECCCCEEEEECCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCC
WAETSGPLALSLADSHAHFASLHITGSGVVH
CCCCCCCEEEEEECCCCEEEEEEEECCCCCC
>Mature Secondary Structure 
TDVEWTIKGREFIHCNCAYGCPCQFNALPTEGHCSAIGLIDIDEGNHGDTRLDGLRCGM
CCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEECCEEEEE
IISWPGAIHEGRGAVVPIIDERASDEQREALLRIMSGQDTEPGATFFQVFATTFETFHDP
EEECCCCEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
VFAPIDFEIDVQGRAARVNIPGWIEARGEPIVNPVTGEQHRARINLPNGFEYDHCEVGRG
EECCCEEEEECCCCEEEEECCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCC
WAETSGPLALSLADSHAHFASLHITGSGVVH
CCCCCCCEEEEEECCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA