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The map label for this gene is 150398576

Identifier: 150398576

GI number: 150398576

Start: 3590494

End: 3590925

Strand: Reverse

Name: 150398576

Synonym: Smed_3387

Alternate gene names: NA

Gene position: 3590925-3590494 (Counterclockwise)

Preceding gene: 150398580

Following gene: 150398575

Centisome position: 94.95

GC content: 65.51

Gene sequence:

>432_bases
TTGACCAGAATCAATTGCATTCCGCCCTCGGAGCTGAGCGGCCCGCATCTCGTCGCCGAATATCGCGAGCTGCCGCGCAT
CTTTGCGCTTGTCCGCGGGGCAATCGCCCGCGGCGAGGAGCCGAACGACCGCCGCAATCCGGAGTTCTATACCCTCGGCA
AGGGGCATGTCCGCTTCTTCTACAGCCGCCTCGGCTATCTGGCTGAGCGCCAGGCCGCGCTGATCGCGGAAATGCAGCGC
CGTGGCTATATGCCGTCATTCCTGGATCCGAACGGGTTGCTCGAGGGGATTCCCCCGGAATGGTGCAATGAATGGGAGCC
GACGCCGGACGCGATGGCTCTCAACCGGGAGCGCATCAGCGAACGGGTAAGCCAGGCGGCTCTGCGGATCACCACCGCGC
CGGCTGGGGACCTGCCAGGGGCAGAGGGCTGA

Upstream 100 bases:

>100_bases
CAAAACCTTGCATCATCGGACCTGTCGTCGCGTCGAGACCCTTGCGCGCTCTGCCGCGACTATTATGGTGCAGTCATCAG
TCCACGATCGGGTGCCAGGC

Downstream 100 bases:

>100_bases
ACGCCGTCTTGCGTCCGGCGCAATGCTGCAATGCAACATTCGCACTATTACCTCAGCGAAAATGATTTATTCTCCTCCTT
GTCGAAGCGCTGTACCTCCT

Product: pyrimidine dimer DNA glycosylase

Products: NA

Alternate protein names: Deoxyribonuclease; Pyrimidine Dimer DNA Glycosylase/Endonuclease V; Endonuclease V; Endonuclease

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTRINCIPPSELSGPHLVAEYRELPRIFALVRGAIARGEEPNDRRNPEFYTLGKGHVRFFYSRLGYLAERQAALIAEMQR
RGYMPSFLDPNGLLEGIPPEWCNEWEPTPDAMALNRERISERVSQAALRITTAPAGDLPGAEG

Sequences:

>Translated_143_residues
MTRINCIPPSELSGPHLVAEYRELPRIFALVRGAIARGEEPNDRRNPEFYTLGKGHVRFFYSRLGYLAERQAALIAEMQR
RGYMPSFLDPNGLLEGIPPEWCNEWEPTPDAMALNRERISERVSQAALRITTAPAGDLPGAEG
>Mature_142_residues
TRINCIPPSELSGPHLVAEYRELPRIFALVRGAIARGEEPNDRRNPEFYTLGKGHVRFFYSRLGYLAERQAALIAEMQRR
GYMPSFLDPNGLLEGIPPEWCNEWEPTPDAMALNRERISERVSQAALRITTAPAGDLPGAEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16065; Mature: 15934

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRINCIPPSELSGPHLVAEYRELPRIFALVRGAIARGEEPNDRRNPEFYTLGKGHVRFF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHH
YSRLGYLAERQAALIAEMQRRGYMPSFLDPNGLLEGIPPEWCNEWEPTPDAMALNRERIS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHH
ERVSQAALRITTAPAGDLPGAEG
HHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TRINCIPPSELSGPHLVAEYRELPRIFALVRGAIARGEEPNDRRNPEFYTLGKGHVRFF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHH
YSRLGYLAERQAALIAEMQRRGYMPSFLDPNGLLEGIPPEWCNEWEPTPDAMALNRERIS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHH
ERVSQAALRITTAPAGDLPGAEG
HHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA