| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is acsA2 [H]
Identifier: 150398386
GI number: 150398386
Start: 3365302
End: 3367251
Strand: Reverse
Name: acsA2 [H]
Synonym: Smed_3194
Alternate gene names: 150398386
Gene position: 3367251-3365302 (Counterclockwise)
Preceding gene: 150398388
Following gene: 150398384
Centisome position: 89.04
GC content: 61.08
Gene sequence:
>1950_bases ATGGACGTCAAGACCTACCCGGTCCTGGAAGCGGCCAAGAACCGTACGCTGCTCGACAATGAGACCTATCTGAAATGGTA CCAGGAGAGCGTTGCCGATCCGGAGACGTTCTGGGGCGAGCATGGCAAGCGAATCGATTGGTTCGAGCCCTATACCAAGG TCAAGAATACGACCTTCGAGGGCGATGTCTCGATCAAGTGGTTCGAAGACGGGCTGACTAACGTCTCCTACAACTGCATC GATCGCCACCTGAAAGCGCATGGCGACAAGACGGCGATCATCTGGGAGGGAGACAATCCCTATCTCGACAAGAAGATCAC TTATAATGAGCTCTACGACACGGTTTGCCGTCTTGCCAACGTCTTGAAAAAGCATGGCGTCAAGAAGGGCGACCGCGTTA CAATATACATGCCGATGATCCCCGAAGCGGCCTATGCCATGCTTGCCTGCACCCGCATCGGCGCCGTCCATTCGGTCGTA TTCGGCGGCTTTTCGCCTGAGGCCCTGGCGGGCCGGATCGTCGATTGCGAGTCGACCTTCGTGATCACCTGCGACGAGGG CGTGCGTGGCGGCAAGCCCGTGGCGCTGAAGGAGAACACCGATACGGCCGTGGGGATCGCCGCCAAGCAGAATGTCACGG TCGGCAAGGTTCTGGTCGTGCGCCGCACCGGCGGCAAGGTCGGATGGGCCCCGGAGCGCGATCTCTGGTACCACCAGGAG ACTGCGGCAGTGGAGCCGCATTGCCCCCCGGAAAGGATGAATGCCGAGGACCCGCTCTTCATTCTCTATACCTCGGGATC CACCGGAAAGCCGAAGGGCGTGCTGCATACGACCGGCGGCTATCTGGTCTATGCCTCGATGACGCATCAATACGTGTTCG ACTACCAGGACGGCGACATCTACTGGTGCACGGCCGATGTCGGCTGGGTCACCGGCCACTCCTATATCGTCTATGGTCCG CTCGCCAATGCGGCGACGACCCTGATGTTCGAGGGCGTGCCGAACTTTCCGGATGCGGGACGGTTCTGGGAAGTCGTGGA CAAGCACAAGGTCAACATCTTCTATACCGCACCCACGGCAATCCGGTCGCTGATGGGCGCCGGCGACGATTTCGTCAAGC GCTCCTCGCGCTCGTCGCTGCGCCTGCTCGGAACCGTCGGCGAGCCGATCAATCCGGAAGCCTGGGAATGGTACTATCAC GTGGTCGGCGACGAGCGTTGTCCAGTCGTCGATACCTGGTGGCAGACGGAAACCGGCGGCATTCTGATCACGCCGCTGCC CGGCGCTACGGACCTCAAACCGGGTTCCGCGACGCGGCCGTTCTTCGGAGTCCAGCCGCAGATCGTCGACGGCGAGGGCA ATGTCGTCGAGGGTGCGGCCGACGGCAACCTTTGCATCATCGACAGCTGGCCCGGTCAGATGCGGACGGTCTATGGCGAT CACGAACGCTTTATCCAGACGTATTTTTCTACCTACAAGGGCAAGTATTTCACCGGAGACGGCTGCCGCCGCGACGAGGA TGGTTATTACTGGATCACCGGCCGCGTCGATGACGTGCTCAACGTCTCGGGACACCGGCTAGGGACGGCTGAGGTTGAAT CGGCGCTGGTCTCGCACCAGCTCGTCTCCGAGGCCGCGGTCGTCGGCTATCCGCATTCGATCAAGGGTCAGGGCATCTAT TGCTATGTCTCGCTGATGGCGGGCGAGGTCGGCAACGACGAACTGCGCCAGGCACTCGTCAAGCACGTACGCTCGGAAAT CGGACCGATCGCGACACCGGACAAGATCCAGTTCGCGCCCGGCCTGCCCAAGACGCGTTCGGGCAAGATCATGCGCCGGA TTCTTCGGAAGATCGCCGAGGACGATTTCGGTTCGCTTGGCGACACTTCGACGCTGGCCGATCCCTCGGTCGTCGATGAC CTGATCGCCAATCGCCAGAACCGCGCCTGA
Upstream 100 bases:
>100_bases AGGAACGGTGGGAGCCGGGCCGGAGCGGGACGAGGAAACTGCGCGCGGTTTCTGGTGCATTCCGCTCATGATCAGATCAG AAATACGCAGGGAGGAAAAT
Downstream 100 bases:
>100_bases CGTGAGTTGGGTACGGGCGCTCCGCTTCGTCCCTAACCCTAACCCTAACCCTCTCCTTCTCCCCGCATGCGGGGAGAAGG TCGCGGCGCATTGAGGGGCT
Product: acetyl-CoA synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase 2; Acyl-activating enzyme 2 [H]
Number of amino acids: Translated: 649; Mature: 649
Protein sequence:
>649_residues MDVKTYPVLEAAKNRTLLDNETYLKWYQESVADPETFWGEHGKRIDWFEPYTKVKNTTFEGDVSIKWFEDGLTNVSYNCI DRHLKAHGDKTAIIWEGDNPYLDKKITYNELYDTVCRLANVLKKHGVKKGDRVTIYMPMIPEAAYAMLACTRIGAVHSVV FGGFSPEALAGRIVDCESTFVITCDEGVRGGKPVALKENTDTAVGIAAKQNVTVGKVLVVRRTGGKVGWAPERDLWYHQE TAAVEPHCPPERMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYASMTHQYVFDYQDGDIYWCTADVGWVTGHSYIVYGP LANAATTLMFEGVPNFPDAGRFWEVVDKHKVNIFYTAPTAIRSLMGAGDDFVKRSSRSSLRLLGTVGEPINPEAWEWYYH VVGDERCPVVDTWWQTETGGILITPLPGATDLKPGSATRPFFGVQPQIVDGEGNVVEGAADGNLCIIDSWPGQMRTVYGD HERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVDDVLNVSGHRLGTAEVESALVSHQLVSEAAVVGYPHSIKGQGIY CYVSLMAGEVGNDELRQALVKHVRSEIGPIATPDKIQFAPGLPKTRSGKIMRRILRKIAEDDFGSLGDTSTLADPSVVDD LIANRQNRA
Sequences:
>Translated_649_residues MDVKTYPVLEAAKNRTLLDNETYLKWYQESVADPETFWGEHGKRIDWFEPYTKVKNTTFEGDVSIKWFEDGLTNVSYNCI DRHLKAHGDKTAIIWEGDNPYLDKKITYNELYDTVCRLANVLKKHGVKKGDRVTIYMPMIPEAAYAMLACTRIGAVHSVV FGGFSPEALAGRIVDCESTFVITCDEGVRGGKPVALKENTDTAVGIAAKQNVTVGKVLVVRRTGGKVGWAPERDLWYHQE TAAVEPHCPPERMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYASMTHQYVFDYQDGDIYWCTADVGWVTGHSYIVYGP LANAATTLMFEGVPNFPDAGRFWEVVDKHKVNIFYTAPTAIRSLMGAGDDFVKRSSRSSLRLLGTVGEPINPEAWEWYYH VVGDERCPVVDTWWQTETGGILITPLPGATDLKPGSATRPFFGVQPQIVDGEGNVVEGAADGNLCIIDSWPGQMRTVYGD HERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVDDVLNVSGHRLGTAEVESALVSHQLVSEAAVVGYPHSIKGQGIY CYVSLMAGEVGNDELRQALVKHVRSEIGPIATPDKIQFAPGLPKTRSGKIMRRILRKIAEDDFGSLGDTSTLADPSVVDD LIANRQNRA >Mature_649_residues MDVKTYPVLEAAKNRTLLDNETYLKWYQESVADPETFWGEHGKRIDWFEPYTKVKNTTFEGDVSIKWFEDGLTNVSYNCI DRHLKAHGDKTAIIWEGDNPYLDKKITYNELYDTVCRLANVLKKHGVKKGDRVTIYMPMIPEAAYAMLACTRIGAVHSVV FGGFSPEALAGRIVDCESTFVITCDEGVRGGKPVALKENTDTAVGIAAKQNVTVGKVLVVRRTGGKVGWAPERDLWYHQE TAAVEPHCPPERMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYASMTHQYVFDYQDGDIYWCTADVGWVTGHSYIVYGP LANAATTLMFEGVPNFPDAGRFWEVVDKHKVNIFYTAPTAIRSLMGAGDDFVKRSSRSSLRLLGTVGEPINPEAWEWYYH VVGDERCPVVDTWWQTETGGILITPLPGATDLKPGSATRPFFGVQPQIVDGEGNVVEGAADGNLCIIDSWPGQMRTVYGD HERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVDDVLNVSGHRLGTAEVESALVSHQLVSEAAVVGYPHSIKGQGIY CYVSLMAGEVGNDELRQALVKHVRSEIGPIATPDKIQFAPGLPKTRSGKIMRRILRKIAEDDFGSLGDTSTLADPSVVDD LIANRQNRA
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI8923896, Length=667, Percent_Identity=53.3733133433283, Blast_Score=717, Evalue=0.0, Organism=Homo sapiens, GI253970489, Length=680, Percent_Identity=52.3529411764706, Blast_Score=712, Evalue=0.0, Organism=Homo sapiens, GI28416953, Length=630, Percent_Identity=52.2222222222222, Blast_Score=669, Evalue=0.0, Organism=Homo sapiens, GI13375727, Length=629, Percent_Identity=38.79173290938, Blast_Score=417, Evalue=1e-116, Organism=Homo sapiens, GI38505220, Length=598, Percent_Identity=30.1003344481605, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI42544132, Length=518, Percent_Identity=29.3436293436293, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI122937307, Length=568, Percent_Identity=27.8169014084507, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI115511026, Length=522, Percent_Identity=28.3524904214559, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI31982927, Length=632, Percent_Identity=25, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI58082049, Length=513, Percent_Identity=27.4853801169591, Blast_Score=164, Evalue=3e-40, Organism=Homo sapiens, GI157311624, Length=515, Percent_Identity=26.9902912621359, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI157311622, Length=515, Percent_Identity=26.9902912621359, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI195947378, Length=440, Percent_Identity=25.9090909090909, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI187761345, Length=389, Percent_Identity=26.4781491002571, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI187761343, Length=389, Percent_Identity=26.4781491002571, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI42544134, Length=336, Percent_Identity=25.297619047619, Blast_Score=94, Evalue=6e-19, Organism=Homo sapiens, GI156151445, Length=558, Percent_Identity=22.9390681003584, Blast_Score=67, Evalue=6e-11, Organism=Escherichia coli, GI1790505, Length=635, Percent_Identity=66.7716535433071, Blast_Score=884, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=638, Percent_Identity=37.1473354231975, Blast_Score=405, Evalue=1e-114, Organism=Escherichia coli, GI1788107, Length=579, Percent_Identity=22.6252158894646, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI145693145, Length=548, Percent_Identity=21.8978102189781, Blast_Score=88, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71983001, Length=657, Percent_Identity=49.923896499239, Blast_Score=647, Evalue=0.0, Organism=Caenorhabditis elegans, GI71982997, Length=657, Percent_Identity=49.923896499239, Blast_Score=647, Evalue=0.0, Organism=Caenorhabditis elegans, GI17569507, Length=670, Percent_Identity=20.8955223880597, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17558820, Length=516, Percent_Identity=24.4186046511628, Blast_Score=103, Evalue=4e-22, Organism=Caenorhabditis elegans, GI32563687, Length=525, Percent_Identity=22.0952380952381, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17538037, Length=137, Percent_Identity=29.9270072992701, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323182, Length=651, Percent_Identity=49.0015360983103, Blast_Score=625, Evalue=1e-180, Organism=Saccharomyces cerevisiae, GI6319264, Length=643, Percent_Identity=46.1897356143079, Blast_Score=568, Evalue=1e-163, Organism=Saccharomyces cerevisiae, GI6319699, Length=369, Percent_Identity=25.2032520325203, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI24667955, Length=656, Percent_Identity=54.4207317073171, Blast_Score=718, Evalue=0.0, Organism=Drosophila melanogaster, GI62472339, Length=566, Percent_Identity=57.5971731448763, Blast_Score=662, Evalue=0.0, Organism=Drosophila melanogaster, GI24667959, Length=524, Percent_Identity=57.824427480916, Blast_Score=616, Evalue=1e-176, Organism=Drosophila melanogaster, GI21355225, Length=632, Percent_Identity=37.0253164556962, Blast_Score=380, Evalue=1e-105, Organism=Drosophila melanogaster, GI21355181, Length=589, Percent_Identity=22.9202037351443, Blast_Score=96, Evalue=8e-20, Organism=Drosophila melanogaster, GI18859661, Length=550, Percent_Identity=23.4545454545455, Blast_Score=89, Evalue=9e-18, Organism=Drosophila melanogaster, GI24656500, Length=550, Percent_Identity=22.9090909090909, Blast_Score=80, Evalue=6e-15, Organism=Drosophila melanogaster, GI24581924, Length=359, Percent_Identity=23.1197771587744, Blast_Score=70, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 71982; Mature: 71982
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVKTYPVLEAAKNRTLLDNETYLKWYQESVADPETFWGEHGKRIDWFEPYTKVKNTTFE CCCCCCCHHHHHCCCEEECCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHCCCEEC GDVSIKWFEDGLTNVSYNCIDRHLKAHGDKTAIIWEGDNPYLDKKITYNELYDTVCRLAN CCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH VLKKHGVKKGDRVTIYMPMIPEAAYAMLACTRIGAVHSVVFGGFSPEALAGRIVDCESTF HHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEECCCEE VITCDEGVRGGKPVALKENTDTAVGIAAKQNVTVGKVLVVRRTGGKVGWAPERDLWYHQE EEEECCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCEEECC TAAVEPHCPPERMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYASMTHQYVFDYQDGDI CCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEEEECEEEEEEECCCCE YWCTADVGWVTGHSYIVYGPLANAATTLMFEGVPNFPDAGRFWEVVDKHKVNIFYTAPTA EEEECCCCEEECCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEEEECHHH IRSLMGAGDDFVKRSSRSSLRLLGTVGEPINPEAWEWYYHVVGDERCPVVDTWWQTETGG HHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCC ILITPLPGATDLKPGSATRPFFGVQPQIVDGEGNVVEGAADGNLCIIDSWPGQMRTVYGD EEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCEEEEECCCCCEEEEECC HERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVDDVLNVSGHRLGTAEVESALVSHQ HHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHH LVSEAAVVGYPHSIKGQGIYCYVSLMAGEVGNDELRQALVKHVRSEIGPIATPDKIQFAP HHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECC GLPKTRSGKIMRRILRKIAEDDFGSLGDTSTLADPSVVDDLIANRQNRA CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MDVKTYPVLEAAKNRTLLDNETYLKWYQESVADPETFWGEHGKRIDWFEPYTKVKNTTFE CCCCCCCHHHHHCCCEEECCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHCCCEEC GDVSIKWFEDGLTNVSYNCIDRHLKAHGDKTAIIWEGDNPYLDKKITYNELYDTVCRLAN CCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH VLKKHGVKKGDRVTIYMPMIPEAAYAMLACTRIGAVHSVVFGGFSPEALAGRIVDCESTF HHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEECCCEE VITCDEGVRGGKPVALKENTDTAVGIAAKQNVTVGKVLVVRRTGGKVGWAPERDLWYHQE EEEECCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCEEECC TAAVEPHCPPERMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYASMTHQYVFDYQDGDI CCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEEEECEEEEEEECCCCE YWCTADVGWVTGHSYIVYGPLANAATTLMFEGVPNFPDAGRFWEVVDKHKVNIFYTAPTA EEEECCCCEEECCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEEEECHHH IRSLMGAGDDFVKRSSRSSLRLLGTVGEPINPEAWEWYYHVVGDERCPVVDTWWQTETGG HHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCC ILITPLPGATDLKPGSATRPFFGVQPQIVDGEGNVVEGAADGNLCIIDSWPGQMRTVYGD EEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCEEEEECCCCCEEEEECC HERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVDDVLNVSGHRLGTAEVESALVSHQ HHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHH LVSEAAVVGYPHSIKGQGIYCYVSLMAGEVGNDELRQALVKHVRSEIGPIATPDKIQFAP HHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECC GLPKTRSGKIMRRILRKIAEDDFGSLGDTSTLADPSVVDDLIANRQNRA CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]