| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150398254
Identifier: 150398254
GI number: 150398254
Start: 3209553
End: 3209705
Strand: Reverse
Name: 150398254
Synonym: Smed_3060
Alternate gene names: NA
Gene position: 3209705-3209553 (Counterclockwise)
Preceding gene: 150398257
Following gene: 150398253
Centisome position: 84.87
GC content: 55.56
Gene sequence:
>153_bases TTGCCGAACCGACAAAAAATTGATATGAGCACGGGCATGGAATCCAAATTCGGATGTCGTGAGCAGAAAATCGTCGTGCT GCAGGACCACAAGCGCCTGCCGGCACGCTTTTTCGCGCGCGTCTCAGGGGCTCTTACCAGCCGCCTATCCTGA
Upstream 100 bases:
>100_bases GATCGTGTTCAAAATAATAAGTTTTGCTTATCATACCCCTTCCGGGCGTTCAACGCGCTCAAACCCCCTCCTCCTGTGAG ACACTGCAGTCGTCGCGCGA
Downstream 100 bases:
>100_bases TCGCTCGATCAGCAGTTTGCCGGCCGCCTTGGTGCCGGCCCCATTCCACATTCCTTATTCTGATGGACATACAAGCCATG AGCGCACCGCGTACTCTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 49
Protein sequence:
>50_residues MPNRQKIDMSTGMESKFGCREQKIVVLQDHKRLPARFFARVSGALTSRLS
Sequences:
>Translated_50_residues MPNRQKIDMSTGMESKFGCREQKIVVLQDHKRLPARFFARVSGALTSRLS >Mature_49_residues PNRQKIDMSTGMESKFGCREQKIVVLQDHKRLPARFFARVSGALTSRLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5723; Mature: 5592
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNRQKIDMSTGMESKFGCREQKIVVLQDHKRLPARFFARVSGALTSRLS CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure PNRQKIDMSTGMESKFGCREQKIVVLQDHKRLPARFFARVSGALTSRLS CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA