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The map label for this gene is 150398057

Identifier: 150398057

GI number: 150398057

Start: 2986873

End: 2987283

Strand: Reverse

Name: 150398057

Synonym: Smed_2859

Alternate gene names: NA

Gene position: 2987283-2986873 (Counterclockwise)

Preceding gene: 150398058

Following gene: 150398055

Centisome position: 78.99

GC content: 55.72

Gene sequence:

>411_bases
TTGCGATCATGTTCGATGGAGGGGGAGGCATCTGCCTGTATCGCAGCACTTCAAAAGAGTCGTTCACGTCTCATCTCGGC
AGTGAACGATGTCGAAACCGGCACTGTTATGGCAGGTAGAGTGAGGAGCGGGGACCGTTGCGAAGCGATTGCCGACCTGG
ATGCTTTTCTTACCGTCTTCCGCATCGACATAGCCCCCGTCGATGATCGTACGGCCCGCGCAGCGATGAAGGCCAGGATA
GATTACGGTCAGGGGTTTGGCACGCGTGGCGGATTGAACTTTGGGGATTGCTTCGCCTACGCGCTGGAAAAACAGCGTTC
CGCTCCGTTGCTCTATGCCGGTAACGACTTTGGCATGACTGATATTAACCCGGCATTGAAGGCTCCAAGCCTGAGGAGAA
CGAAGAGGTAG

Upstream 100 bases:

>100_bases
TCGCCGCTGGATGAAAGTTCAGTGGCAGGTCAAAGCAGTCGGGGACACGCCCGAAGAGCTTGGCTTCCCTGAATGATCGT
CGTGGATTCATCCGCTATCA

Downstream 100 bases:

>100_bases
AGGCTGGAAACGGCGAAGGAACCCTGGCAATGCCTGGCCTCCACACGGCGGACGCAGCTGTTCCAAGCCTTACCGCAGCA
TTGCGCGGGCGCTCTCGGCA

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRSCSMEGEASACIAALQKSRSRLISAVNDVETGTVMAGRVRSGDRCEAIADLDAFLTVFRIDIAPVDDRTARAAMKARI
DYGQGFGTRGGLNFGDCFAYALEKQRSAPLLYAGNDFGMTDINPALKAPSLRRTKR

Sequences:

>Translated_136_residues
MRSCSMEGEASACIAALQKSRSRLISAVNDVETGTVMAGRVRSGDRCEAIADLDAFLTVFRIDIAPVDDRTARAAMKARI
DYGQGFGTRGGLNFGDCFAYALEKQRSAPLLYAGNDFGMTDINPALKAPSLRRTKR
>Mature_136_residues
MRSCSMEGEASACIAALQKSRSRLISAVNDVETGTVMAGRVRSGDRCEAIADLDAFLTVFRIDIAPVDDRTARAAMKARI
DYGQGFGTRGGLNFGDCFAYALEKQRSAPLLYAGNDFGMTDINPALKAPSLRRTKR

Specific function: Unknown

COG id: COG3742

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0110 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 14700; Mature: 14700

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSCSMEGEASACIAALQKSRSRLISAVNDVETGTVMAGRVRSGDRCEAIADLDAFLTVF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHH
RIDIAPVDDRTARAAMKARIDYGQGFGTRGGLNFGDCFAYALEKQRSAPLLYAGNDFGMT
HHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC
DINPALKAPSLRRTKR
CCCHHHCCCCCCCCCC
>Mature Secondary Structure
MRSCSMEGEASACIAALQKSRSRLISAVNDVETGTVMAGRVRSGDRCEAIADLDAFLTVF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHH
RIDIAPVDDRTARAAMKARIDYGQGFGTRGGLNFGDCFAYALEKQRSAPLLYAGNDFGMT
HHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC
DINPALKAPSLRRTKR
CCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]