| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is suhB [H]
Identifier: 150397863
GI number: 150397863
Start: 2770474
End: 2771274
Strand: Reverse
Name: suhB [H]
Synonym: Smed_2665
Alternate gene names: 150397863
Gene position: 2771274-2770474 (Counterclockwise)
Preceding gene: 150397864
Following gene: 150397862
Centisome position: 73.28
GC content: 67.04
Gene sequence:
>801_bases ATGGCCCGTTCTGCTCTTCTCAATGTCATGGTCCAGGCCGCCTTCAAGGCCGGCAAGTCGCTCGCGCGCGATTTTGGCGA AGTGCAGAACCTGCAGGTGTCCTTGAAAGGACCGGCCGATTTCGTATCGCAGGCGGACCACAAGGCGGAGCGGATCATCC GCGAGGACCTTATGAAGGCCCGCCCGACCTACGGCTTCCTCGGAGAGGAAGGCGAGGAGATCAAGGGAACCGACGGCGCC CACCGCTGGATCGTCGATCCACTCGACGGCACCACCAATTTCCTGCACGGCATCCCGCATTTCGCCATCTCGGTCGCGCT GGAGCGCCAGGGTGAAGTCGTCGGCGCCGTCGTCTTCAACCCGGCCACGGACGAGCTCTACACCGCAGAGCGCGGCGGCG GCGCCTTCCTTAACGACCGGCGTCTGCGCGTCGGCGGGCGCAAGGTGCTCTCGGACGCCGTGATCGGAACCGGTACGCCG CATCTCGGCCGCGGCAATCACGGCAAGCACCTGGTCGAGCTGCGCCACGTCATGGGCGAGGTCGCCGGCATTCGCCGCCT CGGCTCGGCATCGCTCGACCTTGCTTACGTGGCTGCAGGTCGATTCGACGGCTTCTGGGAGCGGGATCTGGCCGCCTGGG ACATGGCTGCCGGCACCCTGCTCATCCGCGAGGCCGGCGGCTGGGTCACCGATGCCGAAGGCGGCGGCAGGCCGCTCGAG GCGGGTTCGGTCGTGTGCGGCAACGAACAGATAGCCAAGGCGCTGCGCGAGGTCATCCAGCGTCCGATTCCGTCCAGGTG A
Upstream 100 bases:
>100_bases CCCTTGCCCGCGCTTCGAGCTGCGGCCGGCATGCGCACTGTCAGACAGGTTCAATGTCCGGTCGAGCATCTCGGCTGGCC TTCGCTAGAGGAATCGCCGC
Downstream 100 bases:
>100_bases CGGCATTGCTGCCGTCCCAATTGCGCCGAGGTTTCAGGGCGTGGGAGCACCTCTACCGCGCCGGATGAATTCGATCGCAT GCGGCGCGCCTCAAGTCTTT
Product: inositol-phosphate phosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MARSALLNVMVQAAFKAGKSLARDFGEVQNLQVSLKGPADFVSQADHKAERIIREDLMKARPTYGFLGEEGEEIKGTDGA HRWIVDPLDGTTNFLHGIPHFAISVALERQGEVVGAVVFNPATDELYTAERGGGAFLNDRRLRVGGRKVLSDAVIGTGTP HLGRGNHGKHLVELRHVMGEVAGIRRLGSASLDLAYVAAGRFDGFWERDLAAWDMAAGTLLIREAGGWVTDAEGGGRPLE AGSVVCGNEQIAKALREVIQRPIPSR
Sequences:
>Translated_266_residues MARSALLNVMVQAAFKAGKSLARDFGEVQNLQVSLKGPADFVSQADHKAERIIREDLMKARPTYGFLGEEGEEIKGTDGA HRWIVDPLDGTTNFLHGIPHFAISVALERQGEVVGAVVFNPATDELYTAERGGGAFLNDRRLRVGGRKVLSDAVIGTGTP HLGRGNHGKHLVELRHVMGEVAGIRRLGSASLDLAYVAAGRFDGFWERDLAAWDMAAGTLLIREAGGWVTDAEGGGRPLE AGSVVCGNEQIAKALREVIQRPIPSR >Mature_265_residues ARSALLNVMVQAAFKAGKSLARDFGEVQNLQVSLKGPADFVSQADHKAERIIREDLMKARPTYGFLGEEGEEIKGTDGAH RWIVDPLDGTTNFLHGIPHFAISVALERQGEVVGAVVFNPATDELYTAERGGGAFLNDRRLRVGGRKVLSDAVIGTGTPH LGRGNHGKHLVELRHVMGEVAGIRRLGSASLDLAYVAAGRFDGFWERDLAAWDMAAGTLLIREAGGWVTDAEGGGRPLEA GSVVCGNEQIAKALREVIQRPIPSR
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=259, Percent_Identity=33.976833976834, Blast_Score=141, Evalue=8e-34, Organism=Homo sapiens, GI5031789, Length=275, Percent_Identity=31.6363636363636, Blast_Score=133, Evalue=1e-31, Organism=Homo sapiens, GI221625487, Length=275, Percent_Identity=31.6363636363636, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI221625507, Length=170, Percent_Identity=32.9411764705882, Blast_Score=94, Evalue=8e-20, Organism=Escherichia coli, GI1788882, Length=250, Percent_Identity=43.6, Blast_Score=212, Evalue=2e-56, Organism=Caenorhabditis elegans, GI193202570, Length=251, Percent_Identity=33.0677290836653, Blast_Score=137, Evalue=5e-33, Organism=Caenorhabditis elegans, GI193202572, Length=249, Percent_Identity=32.1285140562249, Blast_Score=131, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6320493, Length=201, Percent_Identity=39.3034825870647, Blast_Score=144, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6321836, Length=212, Percent_Identity=32.5471698113208, Blast_Score=116, Evalue=4e-27, Organism=Drosophila melanogaster, GI24664922, Length=264, Percent_Identity=33.3333333333333, Blast_Score=143, Evalue=1e-34, Organism=Drosophila melanogaster, GI21357957, Length=268, Percent_Identity=33.5820895522388, Blast_Score=142, Evalue=2e-34, Organism=Drosophila melanogaster, GI21357329, Length=270, Percent_Identity=32.962962962963, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI24664918, Length=263, Percent_Identity=34.6007604562738, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI24664926, Length=230, Percent_Identity=34.3478260869565, Blast_Score=138, Evalue=3e-33, Organism=Drosophila melanogaster, GI21357303, Length=247, Percent_Identity=33.6032388663968, Blast_Score=115, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 28597; Mature: 28466
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSALLNVMVQAAFKAGKSLARDFGEVQNLQVSLKGPADFVSQADHKAERIIREDLMKA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHC RPTYGFLGEEGEEIKGTDGAHRWIVDPLDGTTNFLHGIPHFAISVALERQGEVVGAVVFN CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHCCCCEEEEEEEC PATDELYTAERGGGAFLNDRRLRVGGRKVLSDAVIGTGTPHLGRGNHGKHLVELRHVMGE CCCCHHEECCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH VAGIRRLGSASLDLAYVAAGRFDGFWERDLAAWDMAAGTLLIREAGGWVTDAEGGGRPLE HHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCEEEEEECCCEEEECCCCCCCCC AGSVVCGNEQIAKALREVIQRPIPSR CCCEEECCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ARSALLNVMVQAAFKAGKSLARDFGEVQNLQVSLKGPADFVSQADHKAERIIREDLMKA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHC RPTYGFLGEEGEEIKGTDGAHRWIVDPLDGTTNFLHGIPHFAISVALERQGEVVGAVVFN CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHCCCCEEEEEEEC PATDELYTAERGGGAFLNDRRLRVGGRKVLSDAVIGTGTPHLGRGNHGKHLVELRHVMGE CCCCHHEECCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH VAGIRRLGSASLDLAYVAAGRFDGFWERDLAAWDMAAGTLLIREAGGWVTDAEGGGRPLE HHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCEEEEEECCCEEEECCCCCCCCC AGSVVCGNEQIAKALREVIQRPIPSR CCCEEECCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]