| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397862
Identifier: 150397862
GI number: 150397862
Start: 2769074
End: 2770180
Strand: Reverse
Name: 150397862
Synonym: Smed_2664
Alternate gene names: NA
Gene position: 2770180-2769074 (Counterclockwise)
Preceding gene: 150397863
Following gene: 150397861
Centisome position: 73.25
GC content: 63.23
Gene sequence:
>1107_bases ATGGCGAAACTGAACCTGGCCGGGTGGCGTGATCGCGAAGACTTGGAGGAGGACTACGGTCCTCACAAGCTTTCGAGCCC AATGCCCTATTTCTGGACGATGGTCCTTTTCCTGATCATCGTGGGATTTGTCGCCGCAATCCTCTTCCGCCAGGCCAGCG AGGCTTTCGCCGGCAATCCCGGCCTCAATGGGTTGATCCTGGGCGTGCTTGCGATCGGTATTCTGCTGGCGTTCAACCAT GTCCTCAGCCTGAGGCCGGAGGTTCGCTGGTTCAACTCCTTCCGTGCCGCCGGCAGTGCCGACAAGGTTGGACGCGATCC GGTGCTGCTCGCCCCGATGCGGGCCCTGATCGGGGGACGCCAGACGACGGCGATATCGACGGCTGCGCTCCGGTCGATCC TCGATTCCATCGCTGCGCGCCTGGACGAGTCGCGTGACATCACCCGCTATCTTGCCGGTCTCCTCGTTTTCCTGGGCCTG CTCGGTACGTTTTGGGGTCTGCTCGGCACGATCGGCTCCATCAACACCGTCATTCAGTCGCTCGATGCCGGAAGCGGCAG CACCGATGACCTGCTGACCTCGCTGAAGAGCGGTCTTTCGGCGCCTCTCACCGGCATGGGAACGGCTTTCTCCGCCTCGC TCTTCGGTCTTTCCGGCTCGCTCATCGTGGGCTTTCTCGACCTGCAGGCGGGGCGGGCGCAGAATCGTTTCTATACGGAG CTCGAGAACTGGCTCTCCTCGGTGACCGATGTTGGACACGGATTTTCCCAGCCGGGCGAAATGAGCGACGGCGCTCCCGC CGAGGAACTGCGGCGGCTCACCGACCAGCTCGCGCGCATGACCCATGAGGGTGGCGTGAACCAGCGCACCACGGCTGCCA TGGCGAGCCTCGCCGAGGGCATTCAGGGCCTTGTCAAGAATATGCGGGGCGAGCAGCAGATGCTGCGCGACTGGATCGAA GCGCAGCAGGAGGAGGCCAAGGCGATGCGCAAGACGCTCGATCGGCTGACCGCGCGCATCGGTCAGGCTGACCGTATCAC CGTGCAGACGGAGAAATCCGTGTCTCCGGCGAAACTCAGCCGCATGGAAGACAGCGGAGGAGATTGA
Upstream 100 bases:
>100_bases CGATTTAGGAGTGTTGCGGCAAATTCAGAGTGTTGCGGCCGCCCTCTTGTTCGTCGGACAGGCGCGGAAACCGCCGCAGA ACCGGGAGACTGGCGAACTT
Downstream 100 bases:
>100_bases CCATGGCGCTCTCCCGACGCCGCGAACCGCGGGCTATCAACTACTGGCCGGGTTTCGTGGACGCGCTCTCGACGCTGCTC ATGGCAATCATGTTCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel Family; Transmembrane Protein
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MAKLNLAGWRDREDLEEDYGPHKLSSPMPYFWTMVLFLIIVGFVAAILFRQASEAFAGNPGLNGLILGVLAIGILLAFNH VLSLRPEVRWFNSFRAAGSADKVGRDPVLLAPMRALIGGRQTTAISTAALRSILDSIAARLDESRDITRYLAGLLVFLGL LGTFWGLLGTIGSINTVIQSLDAGSGSTDDLLTSLKSGLSAPLTGMGTAFSASLFGLSGSLIVGFLDLQAGRAQNRFYTE LENWLSSVTDVGHGFSQPGEMSDGAPAEELRRLTDQLARMTHEGGVNQRTTAAMASLAEGIQGLVKNMRGEQQMLRDWIE AQQEEAKAMRKTLDRLTARIGQADRITVQTEKSVSPAKLSRMEDSGGD
Sequences:
>Translated_368_residues MAKLNLAGWRDREDLEEDYGPHKLSSPMPYFWTMVLFLIIVGFVAAILFRQASEAFAGNPGLNGLILGVLAIGILLAFNH VLSLRPEVRWFNSFRAAGSADKVGRDPVLLAPMRALIGGRQTTAISTAALRSILDSIAARLDESRDITRYLAGLLVFLGL LGTFWGLLGTIGSINTVIQSLDAGSGSTDDLLTSLKSGLSAPLTGMGTAFSASLFGLSGSLIVGFLDLQAGRAQNRFYTE LENWLSSVTDVGHGFSQPGEMSDGAPAEELRRLTDQLARMTHEGGVNQRTTAAMASLAEGIQGLVKNMRGEQQMLRDWIE AQQEEAKAMRKTLDRLTARIGQADRITVQTEKSVSPAKLSRMEDSGGD >Mature_367_residues AKLNLAGWRDREDLEEDYGPHKLSSPMPYFWTMVLFLIIVGFVAAILFRQASEAFAGNPGLNGLILGVLAIGILLAFNHV LSLRPEVRWFNSFRAAGSADKVGRDPVLLAPMRALIGGRQTTAISTAALRSILDSIAARLDESRDITRYLAGLLVFLGLL GTFWGLLGTIGSINTVIQSLDAGSGSTDDLLTSLKSGLSAPLTGMGTAFSASLFGLSGSLIVGFLDLQAGRAQNRFYTEL ENWLSSVTDVGHGFSQPGEMSDGAPAEELRRLTDQLARMTHEGGVNQRTTAAMASLAEGIQGLVKNMRGEQQMLRDWIEA QQEEAKAMRKTLDRLTARIGQADRITVQTEKSVSPAKLSRMEDSGGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39660; Mature: 39529
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLNLAGWRDREDLEEDYGPHKLSSPMPYFWTMVLFLIIVGFVAAILFRQASEAFAGNP CCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLNGLILGVLAIGILLAFNHVLSLRPEVRWFNSFRAAGSADKVGRDPVLLAPMRALIGGR CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC QTTAISTAALRSILDSIAARLDESRDITRYLAGLLVFLGLLGTFWGLLGTIGSINTVIQS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDAGSGSTDDLLTSLKSGLSAPLTGMGTAFSASLFGLSGSLIVGFLDLQAGRAQNRFYTE HCCCCCCHHHHHHHHHHCCCCCCHHCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH LENWLSSVTDVGHGFSQPGEMSDGAPAEELRRLTDQLARMTHEGGVNQRTTAAMASLAEG HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IQGLVKNMRGEQQMLRDWIEAQQEEAKAMRKTLDRLTARIGQADRITVQTEKSVSPAKLS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH RMEDSGGD HHHCCCCC >Mature Secondary Structure AKLNLAGWRDREDLEEDYGPHKLSSPMPYFWTMVLFLIIVGFVAAILFRQASEAFAGNP CCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLNGLILGVLAIGILLAFNHVLSLRPEVRWFNSFRAAGSADKVGRDPVLLAPMRALIGGR CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC QTTAISTAALRSILDSIAARLDESRDITRYLAGLLVFLGLLGTFWGLLGTIGSINTVIQS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDAGSGSTDDLLTSLKSGLSAPLTGMGTAFSASLFGLSGSLIVGFLDLQAGRAQNRFYTE HCCCCCCHHHHHHHHHHCCCCCCHHCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH LENWLSSVTDVGHGFSQPGEMSDGAPAEELRRLTDQLARMTHEGGVNQRTTAAMASLAEG HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IQGLVKNMRGEQQMLRDWIEAQQEEAKAMRKTLDRLTARIGQADRITVQTEKSVSPAKLS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH RMEDSGGD HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA