| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397852
Identifier: 150397852
GI number: 150397852
Start: 2758320
End: 2759345
Strand: Direct
Name: 150397852
Synonym: Smed_2654
Alternate gene names: NA
Gene position: 2758320-2759345 (Clockwise)
Preceding gene: 150397851
Following gene: 150397853
Centisome position: 72.93
GC content: 64.13
Gene sequence:
>1026_bases ATGAGCGAAAGACTGGAAGATATCGCGGTTGCCATGGTCGCCAATGGCCGGGGCCTGCTCGCTGCCGACGAGTCAACCGC AACGATCAAGAAGCGCTTCGACGGCATCGGCCTGGAATCGACAGAGACGTCCCGCCGCGACTACCGCGAGATGCTGCTGC GCGCCGACGATGCGATGCGCGACTATATCTCCGGCGTCATTCTTTATGAGGAAACCCTGTTCCAGAACGCCGCCGACGGC ACGTCGCTGGTCGACATCATCCGCAAGGCGGATTCGATCCCCGGCATCAAGGTCGATGCCGGTGCCAAGCCGATGGCACA TTTCCCGAACGAAACCATCACCGAGGGCCTCGATGGGCTCGCCGCCCGGCTCGCCAAATACCATGAAGCCGGCGCCCGTT TCGCCAAATGGCGCGGTGTGATCGCGATTTCCAACGCCTTGCCGAGCCGGGGCGCGATCAGGGCAAATGCCCATGCGCTC GCCCGCTATGCGGCGCTCTGCCAGGAAGCGAAGATCGTGCCGATCGTCGAGCCGGAAGTGCTTATGGACGGCGCCCCCGG CGACCACTCGATCGAGCGCTCGGAAGAAGTCACCGAATGGACCCTGCGCACCGTCTTCGAGGAGCTGGGCGAACTTCGCG TCAAGCTCGAGGGCATGATACTGAAGCCGAGCATGGTGATCGACGGCAAGAAGGCGCGCAAAGCCTCAGTCGACGAGGTG GCGGAACGCACCATCAAGATCCTGAAACGCACCGTGCCGGCCGCCGTCCCCGGCATCGCCTTCCTCTCCGGCGGCCAATC GACGGAAGAGGCGACGGCCCATCTCTCGGCAATGAACGCTGCCCACGATCTGCCGTGGAAACTCACCTTCTCCTATGGCC GGGCGCTACAGCAGGAGGCGCTCAATGCCTGGGGCGGCAAGGCGGAAAACGTCGCCGCCGGCCAGCGCGCCTTCACCCAC CGGGCCAAGATGTGCAGCCTGGCTGCAAAGGGTAGCTGGACGAAGGACTTCGAGAGGGCTGCCTGA
Upstream 100 bases:
>100_bases GCCTTCGTTCCTGCGGCGCGAGGACGCTTTCGCGCCTCCGGCCGAAAACTTGTTTCATCCGCTGGTCCATTGGGACCAGC GTTGTTCGTAGGAGATAAAT
Downstream 100 bases:
>100_bases GCGAAAAGATACCGGTAAGAGGGAGAGAGGAGAGGTCCGGCGGCAGCGATGCCGCCGGACCTCTACCTTTTTCGGACAAG TAATTGTCAGGGAGACAAGT
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSERLEDIAVAMVANGRGLLAADESTATIKKRFDGIGLESTETSRRDYREMLLRADDAMRDYISGVILYEETLFQNAADG TSLVDIIRKADSIPGIKVDAGAKPMAHFPNETITEGLDGLAARLAKYHEAGARFAKWRGVIAISNALPSRGAIRANAHAL ARYAALCQEAKIVPIVEPEVLMDGAPGDHSIERSEEVTEWTLRTVFEELGELRVKLEGMILKPSMVIDGKKARKASVDEV AERTIKILKRTVPAAVPGIAFLSGGQSTEEATAHLSAMNAAHDLPWKLTFSYGRALQQEALNAWGGKAENVAAGQRAFTH RAKMCSLAAKGSWTKDFERAA
Sequences:
>Translated_341_residues MSERLEDIAVAMVANGRGLLAADESTATIKKRFDGIGLESTETSRRDYREMLLRADDAMRDYISGVILYEETLFQNAADG TSLVDIIRKADSIPGIKVDAGAKPMAHFPNETITEGLDGLAARLAKYHEAGARFAKWRGVIAISNALPSRGAIRANAHAL ARYAALCQEAKIVPIVEPEVLMDGAPGDHSIERSEEVTEWTLRTVFEELGELRVKLEGMILKPSMVIDGKKARKASVDEV AERTIKILKRTVPAAVPGIAFLSGGQSTEEATAHLSAMNAAHDLPWKLTFSYGRALQQEALNAWGGKAENVAAGQRAFTH RAKMCSLAAKGSWTKDFERAA >Mature_340_residues SERLEDIAVAMVANGRGLLAADESTATIKKRFDGIGLESTETSRRDYREMLLRADDAMRDYISGVILYEETLFQNAADGT SLVDIIRKADSIPGIKVDAGAKPMAHFPNETITEGLDGLAARLAKYHEAGARFAKWRGVIAISNALPSRGAIRANAHALA RYAALCQEAKIVPIVEPEVLMDGAPGDHSIERSEEVTEWTLRTVFEELGELRVKLEGMILKPSMVIDGKKARKASVDEVA ERTIKILKRTVPAAVPGIAFLSGGQSTEEATAHLSAMNAAHDLPWKLTFSYGRALQQEALNAWGGKAENVAAGQRAFTHR AKMCSLAAKGSWTKDFERAA
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Homo sapiens, GI34577112, Length=334, Percent_Identity=51.7964071856287, Blast_Score=326, Evalue=2e-89, Organism=Homo sapiens, GI34577110, Length=334, Percent_Identity=51.7964071856287, Blast_Score=326, Evalue=2e-89, Organism=Homo sapiens, GI4557305, Length=334, Percent_Identity=51.7964071856287, Blast_Score=326, Evalue=2e-89, Organism=Homo sapiens, GI193794814, Length=334, Percent_Identity=51.7964071856287, Blast_Score=326, Evalue=2e-89, Organism=Homo sapiens, GI4885063, Length=333, Percent_Identity=49.5495495495495, Blast_Score=313, Evalue=2e-85, Organism=Homo sapiens, GI40354205, Length=333, Percent_Identity=48.6486486486487, Blast_Score=310, Evalue=1e-84, Organism=Caenorhabditis elegans, GI25150450, Length=335, Percent_Identity=48.3582089552239, Blast_Score=314, Evalue=3e-86, Organism=Caenorhabditis elegans, GI71983985, Length=333, Percent_Identity=48.948948948949, Blast_Score=311, Evalue=4e-85, Organism=Caenorhabditis elegans, GI71983990, Length=235, Percent_Identity=46.8085106382979, Blast_Score=210, Evalue=9e-55, Organism=Drosophila melanogaster, GI221459619, Length=335, Percent_Identity=51.3432835820895, Blast_Score=332, Evalue=2e-91, Organism=Drosophila melanogaster, GI24650288, Length=335, Percent_Identity=51.3432835820895, Blast_Score=332, Evalue=2e-91, Organism=Drosophila melanogaster, GI45553577, Length=334, Percent_Identity=51.1976047904192, Blast_Score=332, Evalue=2e-91, Organism=Drosophila melanogaster, GI24650282, Length=334, Percent_Identity=51.1976047904192, Blast_Score=331, Evalue=4e-91, Organism=Drosophila melanogaster, GI24650280, Length=334, Percent_Identity=51.1976047904192, Blast_Score=331, Evalue=4e-91, Organism=Drosophila melanogaster, GI24650278, Length=334, Percent_Identity=51.1976047904192, Blast_Score=331, Evalue=4e-91, Organism=Drosophila melanogaster, GI24650304, Length=336, Percent_Identity=43.75, Blast_Score=280, Evalue=1e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 37004; Mature: 36872
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERLEDIAVAMVANGRGLLAADESTATIKKRFDGIGLESTETSRRDYREMLLRADDAMR CCCHHHHHHHHEEECCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH DYISGVILYEETLFQNAADGTSLVDIIRKADSIPGIKVDAGAKPMAHFPNETITEGLDGL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCCHHHCCCHHHHHHHHHH AARLAKYHEAGARFAKWRGVIAISNALPSRGAIRANAHALARYAALCQEAKIVPIVEPEV HHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECHHH LMDGAPGDHSIERSEEVTEWTLRTVFEELGELRVKLEGMILKPSMVIDGKKARKASVDEV HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCEEECCCHHHHCCHHHH AERTIKILKRTVPAAVPGIAFLSGGQSTEEATAHLSAMNAAHDLPWKLTFSYGRALQQEA HHHHHHHHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH LNAWGGKAENVAAGQRAFTHRAKMCSLAAKGSWTKDFERAA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC >Mature Secondary Structure SERLEDIAVAMVANGRGLLAADESTATIKKRFDGIGLESTETSRRDYREMLLRADDAMR CCHHHHHHHHEEECCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH DYISGVILYEETLFQNAADGTSLVDIIRKADSIPGIKVDAGAKPMAHFPNETITEGLDGL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCCHHHCCCHHHHHHHHHH AARLAKYHEAGARFAKWRGVIAISNALPSRGAIRANAHALARYAALCQEAKIVPIVEPEV HHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECHHH LMDGAPGDHSIERSEEVTEWTLRTVFEELGELRVKLEGMILKPSMVIDGKKARKASVDEV HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCEEECCCHHHHCCHHHH AERTIKILKRTVPAAVPGIAFLSGGQSTEEATAHLSAMNAAHDLPWKLTFSYGRALQQEA HHHHHHHHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH LNAWGGKAENVAAGQRAFTHRAKMCSLAAKGSWTKDFERAA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]