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The map label for this gene is 150397785

Identifier: 150397785

GI number: 150397785

Start: 2688482

End: 2689807

Strand: Direct

Name: 150397785

Synonym: Smed_2587

Alternate gene names: NA

Gene position: 2688482-2689807 (Clockwise)

Preceding gene: 150397784

Following gene: 150397786

Centisome position: 71.09

GC content: 62.14

Gene sequence:

>1326_bases
ATGACGCACATCACTACCGAGGCAAAGGGCTCGCGCGGCGGCGCCGCATTGCGGCTCGTGCTCTGCAGCTTCATCGGCAT
ATTCCTGTTCTTCGTGCCGGTCGATATCAACGGCAAATCGACGATCCTGCTCGACCATGCGGCCACCGCCATATCGACGC
AGGCGCGCCCGGTTGCGATCGGCTTCGTATTGTTGCTGATGGCCTATGGCGCCTTCGCACCCTTCCTGCGCGGTACCTGG
CGCAAGACGGTGACCGATGCCGTGTTTTCGGTCCTGCGGGTCCTCGGACTGGCGCTCGCCGTCCTTTATCTCGCAGGCAT
CGGGCCCGAGGTCCTCTTCGCACCCGACATGCTTCCCTTTCTTTTCGACAAGCTGGTGCTCTCGGTCGGGCTGATCGTGC
CGATAGGCGCTCTGGCACTCGCGTTTCTGATCGGCTACGGCCTTCTCGAATTCACCGGCGTGCTCGTCCAGCCGGTGATG
CGGCCGATCTGGCGTACGCCGGGTTGGTCGGCTATCGACGCCGTCGCTTCCTTCGTCGGCAGCTATTCCCTTGCGCTCCT
GATCACCGACCGGGTCTTCCGTGAAGGCAAGTATACGGTACGCGAAGCCGCGATCATCGCCACGGGCTTTTCCACCGTGT
CGGCTACGTTCATGATCATCGTGGCCAAGACGCTGGGGCTCATGGACGTCTGGAATTTCTACTTCTGGACCACGCTTGTC
GTCACGTTCATCGTTTCTGCGATCACGGCCCGGATCTGGCCGCTTGCCGGGCTTGCGCACGAGGGCGATCGGGACCAGCC
GCTGCCCGCCGGCCGCAGCCGCCTGAGGTTCGCCGTCGAGACCGGCCTCGAACAGGCGGCTACTGCCAAGAGCCTGCCGA
CACTCTTGCGAGAAAGCTTCCTTGATGGCCTGCGCATGGCCGCGATGATCCTGCCGAGCATCATGGCTGTCGGACTCCTC
GGGCTTCTTGCCGCAAAATTCACGCCGATCTTCGACATTCTCGGCCTGACGCTCTATCCCTTCACCTGGATCGTGCAGTT
CGGCGAGCCGATGCTCGCGGCAAAGGCACTCGCCTCCGGCCTTGCCGAGATGTTCCTGCCTGCCATACTGCTCAAGGAGG
CAGCACCGGACATGAAGTTCGTGGCGGCCGTGGTGTCTGTCAGCCAGGTCCTGTTTCTGTCGGCCTCCGTTCCCTGCATG
CTGGCGACCTCTATCCCGCTCAGCTTCCGCAACCTTCTGGTGATCTGGTATATTCGCGTCGTATTGAGCATACTGGTGAC
GGCACCGATCGTTTGGATCGGAACATCCATGGGATGGCTCGGCTGA

Upstream 100 bases:

>100_bases
TGAACGAAGACTTCGACCGTATGCGGCGCCTGATGCAGGGGGCCGCCGACCAACAGAAATCGACAGGTAAACCGCTCTGA
AAAGGAACGGAGGAGACGAC

Downstream 100 bases:

>100_bases
CGATGATGCGAATTTTGCGCTCGAGCGAGTACAGGCATATGCCCTGGAAGAACGGCGGCGGGGAGACGGTGGAAATCGCC
GTTTCCCCGGATCGCGCCAC

Product: nucleoside recognition domain-containing protein

Products: NA

Alternate protein names: ORF A [H]

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MTHITTEAKGSRGGAALRLVLCSFIGIFLFFVPVDINGKSTILLDHAATAISTQARPVAIGFVLLLMAYGAFAPFLRGTW
RKTVTDAVFSVLRVLGLALAVLYLAGIGPEVLFAPDMLPFLFDKLVLSVGLIVPIGALALAFLIGYGLLEFTGVLVQPVM
RPIWRTPGWSAIDAVASFVGSYSLALLITDRVFREGKYTVREAAIIATGFSTVSATFMIIVAKTLGLMDVWNFYFWTTLV
VTFIVSAITARIWPLAGLAHEGDRDQPLPAGRSRLRFAVETGLEQAATAKSLPTLLRESFLDGLRMAAMILPSIMAVGLL
GLLAAKFTPIFDILGLTLYPFTWIVQFGEPMLAAKALASGLAEMFLPAILLKEAAPDMKFVAAVVSVSQVLFLSASVPCM
LATSIPLSFRNLLVIWYIRVVLSILVTAPIVWIGTSMGWLG

Sequences:

>Translated_441_residues
MTHITTEAKGSRGGAALRLVLCSFIGIFLFFVPVDINGKSTILLDHAATAISTQARPVAIGFVLLLMAYGAFAPFLRGTW
RKTVTDAVFSVLRVLGLALAVLYLAGIGPEVLFAPDMLPFLFDKLVLSVGLIVPIGALALAFLIGYGLLEFTGVLVQPVM
RPIWRTPGWSAIDAVASFVGSYSLALLITDRVFREGKYTVREAAIIATGFSTVSATFMIIVAKTLGLMDVWNFYFWTTLV
VTFIVSAITARIWPLAGLAHEGDRDQPLPAGRSRLRFAVETGLEQAATAKSLPTLLRESFLDGLRMAAMILPSIMAVGLL
GLLAAKFTPIFDILGLTLYPFTWIVQFGEPMLAAKALASGLAEMFLPAILLKEAAPDMKFVAAVVSVSQVLFLSASVPCM
LATSIPLSFRNLLVIWYIRVVLSILVTAPIVWIGTSMGWLG
>Mature_440_residues
THITTEAKGSRGGAALRLVLCSFIGIFLFFVPVDINGKSTILLDHAATAISTQARPVAIGFVLLLMAYGAFAPFLRGTWR
KTVTDAVFSVLRVLGLALAVLYLAGIGPEVLFAPDMLPFLFDKLVLSVGLIVPIGALALAFLIGYGLLEFTGVLVQPVMR
PIWRTPGWSAIDAVASFVGSYSLALLITDRVFREGKYTVREAAIIATGFSTVSATFMIIVAKTLGLMDVWNFYFWTTLVV
TFIVSAITARIWPLAGLAHEGDRDQPLPAGRSRLRFAVETGLEQAATAKSLPTLLRESFLDGLRMAAMILPSIMAVGLLG
LLAAKFTPIFDILGLTLYPFTWIVQFGEPMLAAKALASGLAEMFLPAILLKEAAPDMKFVAAVVSVSQVLFLSASVPCML
ATSIPLSFRNLLVIWYIRVVLSILVTAPIVWIGTSMGWLG

Specific function: Unknown

COG id: COG3314

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 47506; Mature: 47375

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
THITTEAKGSRGGAALRLVLCSFIGIFLFFVPVDINGKSTILLDHAATAISTQARPVAI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCHHHH
GFVLLLMAYGAFAPFLRGTWRKTVTDAVFSVLRVLGLALAVLYLAGIGPEVLFAPDMLPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHH
LFDKLVLSVGLIVPIGALALAFLIGYGLLEFTGVLVQPVMRPIWRTPGWSAIDAVASFVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
SYSLALLITDRVFREGKYTVREAAIIATGFSTVSATFMIIVAKTLGLMDVWNFYFWTTLV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTFIVSAITARIWPLAGLAHEGDRDQPLPAGRSRLRFAVETGLEQAATAKSLPTLLRESF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LDGLRMAAMILPSIMAVGLLGLLAAKFTPIFDILGLTLYPFTWIVQFGEPMLAAKALASG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LAEMFLPAILLKEAAPDMKFVAAVVSVSQVLFLSASVPCMLATSIPLSFRNLLVIWYIRV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHH
VLSILVTAPIVWIGTSMGWLG
HHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA