| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is hisC1 [H]
Identifier: 150397748
GI number: 150397748
Start: 2648242
End: 2649348
Strand: Reverse
Name: hisC1 [H]
Synonym: Smed_2550
Alternate gene names: 150397748
Gene position: 2649348-2648242 (Counterclockwise)
Preceding gene: 150397749
Following gene: 150397747
Centisome position: 70.05
GC content: 61.61
Gene sequence:
>1107_bases ATGAATCTTGCCCTGAAAAGCCCTGAGCCGCGTTCCGGCATTCTGGACATCGCCGCCTACGTGCCCGGCAAGGAAATAGC GCCCGGTCTTGCCAAGGTGCACAAGCTTTCGTCGAACGAAACGCCTCTCGGCGCGAGCCCGCGCGCGATCGAGGCTTTCC AGAAGGCAGCTTTCAATCTCGAACGCTACCCGGACGGTCAGGCGAATGCGTTGAAGGAAGCGATCGCTGCCGTTCATGGG CTGAATGCCGCCAATATCCTGTGCGGAAACGGGTCGGACGAACTGCTCGGTCTTCTCTGCCAGACCTATCTCGGCCCTGG CGACGAGGGGATCGTCACCCAGCATGGTTTTCTGGTCTACAGGATCCAGATCGCTGCCTCCGGCGGGACGCCCGTCACGG TCAGCGAAAGGGACGAGCGCGTCGATGTCGATGCGATCATCGCGGCCGTCACCGAACGGACGAGGATCGTGTTCATAGCC AACCCGGGCAATCCGACCGGCACCTATGTCCCGGTGGACGAAGTCCGGCGCCTGCATGCGGCTTTGCCGGCCGGCGCTCT GCTGGTGCTCGATGCCGCCTATGCGGAATATGTCAGGCGCAACGACTATGAAGCCGGGCTTGAGCTCGTATCCTCCAACC GCAATGTCGTGATGACGCGAACCTTCTCGAAAATCTACGGCCTCGCGGGTTTGCGCATCGGCTGGATGTATGCGCCGCGC GACGTGGTGGAGGCGTTGGACCGCGTGCGCGGCCCCTTCAACCTGAATGCTCCGGCGATCGCCGCCGGCGCCGCGGCAAT CCGCGATCAGGCCTTTATTGCCGAGGCGGGCGACCACAATCAAAAATGGCTGGCAATCGTCAGTCAGGCGCTGACGAAAA TCGGCCTCCGCGTTACGCCGTCGGTGACGAACTTCGTGCTGATCCATTTTCCGGCAGAAGCCGGCATGTCTGCCGGCGAT GCGGATTCCTATCTGACAAGCCGCGGTTTCATCTTGCGTGCCGTCGGCGCCTACGGTTTTCCCAATGCGCTGAGAATGAC GATAGGCACGAAAGAAGCGAACGAGGGCGTCGTTGCGGCGCTGACTGAATTCATGGGACGGAAATGA
Upstream 100 bases:
>100_bases CCGACACAGCGGAGGCCGCCAGCATGCCACGGCCGCACTCGACAAACTCCACCGTCCCCGGTATTGGCTGGACCGCATTC TCCCCGTGAAAGCTGGTCCG
Downstream 100 bases:
>100_bases TGGCTCAGCAGTTCGAAACCATCGCTCTGATCGGCGTCGGTTTGATCGGATCGTCGATTGCGCGGGATATCCGTGAGAAG CAGCTTGCCGGTCGGGTAGT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 1 [H]
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MNLALKSPEPRSGILDIAAYVPGKEIAPGLAKVHKLSSNETPLGASPRAIEAFQKAAFNLERYPDGQANALKEAIAAVHG LNAANILCGNGSDELLGLLCQTYLGPGDEGIVTQHGFLVYRIQIAASGGTPVTVSERDERVDVDAIIAAVTERTRIVFIA NPGNPTGTYVPVDEVRRLHAALPAGALLVLDAAYAEYVRRNDYEAGLELVSSNRNVVMTRTFSKIYGLAGLRIGWMYAPR DVVEALDRVRGPFNLNAPAIAAGAAAIRDQAFIAEAGDHNQKWLAIVSQALTKIGLRVTPSVTNFVLIHFPAEAGMSAGD ADSYLTSRGFILRAVGAYGFPNALRMTIGTKEANEGVVAALTEFMGRK
Sequences:
>Translated_368_residues MNLALKSPEPRSGILDIAAYVPGKEIAPGLAKVHKLSSNETPLGASPRAIEAFQKAAFNLERYPDGQANALKEAIAAVHG LNAANILCGNGSDELLGLLCQTYLGPGDEGIVTQHGFLVYRIQIAASGGTPVTVSERDERVDVDAIIAAVTERTRIVFIA NPGNPTGTYVPVDEVRRLHAALPAGALLVLDAAYAEYVRRNDYEAGLELVSSNRNVVMTRTFSKIYGLAGLRIGWMYAPR DVVEALDRVRGPFNLNAPAIAAGAAAIRDQAFIAEAGDHNQKWLAIVSQALTKIGLRVTPSVTNFVLIHFPAEAGMSAGD ADSYLTSRGFILRAVGAYGFPNALRMTIGTKEANEGVVAALTEFMGRK >Mature_368_residues MNLALKSPEPRSGILDIAAYVPGKEIAPGLAKVHKLSSNETPLGASPRAIEAFQKAAFNLERYPDGQANALKEAIAAVHG LNAANILCGNGSDELLGLLCQTYLGPGDEGIVTQHGFLVYRIQIAASGGTPVTVSERDERVDVDAIIAAVTERTRIVFIA NPGNPTGTYVPVDEVRRLHAALPAGALLVLDAAYAEYVRRNDYEAGLELVSSNRNVVMTRTFSKIYGLAGLRIGWMYAPR DVVEALDRVRGPFNLNAPAIAAGAAAIRDQAFIAEAGDHNQKWLAIVSQALTKIGLRVTPSVTNFVLIHFPAEAGMSAGD ADSYLTSRGFILRAVGAYGFPNALRMTIGTKEANEGVVAALTEFMGRK
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=326, Percent_Identity=27.9141104294479, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1786816, Length=307, Percent_Identity=25.0814332247557, Blast_Score=65, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6322075, Length=369, Percent_Identity=24.9322493224932, Blast_Score=99, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 39138; Mature: 39138
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLALKSPEPRSGILDIAAYVPGKEIAPGLAKVHKLSSNETPLGASPRAIEAFQKAAFNL CCCCCCCCCCCCCCEEHEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC ERYPDGQANALKEAIAAVHGLNAANILCGNGSDELLGLLCQTYLGPGDEGIVTQHGFLVY CCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEECCEEEE RIQIAASGGTPVTVSERDERVDVDAIIAAVTERTRIVFIANPGNPTGTYVPVDEVRRLHA EEEEEECCCCEEEECCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCEECHHHHHHHHH ALPAGALLVLDAAYAEYVRRNDYEAGLELVSSNRNVVMTRTFSKIYGLAGLRIGWMYAPR HCCCCHHEEHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEHHHHHCCCCCEEEEEECCH DVVEALDRVRGPFNLNAPAIAAGAAAIRDQAFIAEAGDHNQKWLAIVSQALTKIGLRVTP HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHCCCEECC SVTNFVLIHFPAEAGMSAGDADSYLTSRGFILRAVGAYGFPNALRMTIGTKEANEGVVAA CCCEEEEEEECHHCCCCCCCCHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHH LTEFMGRK HHHHHCCC >Mature Secondary Structure MNLALKSPEPRSGILDIAAYVPGKEIAPGLAKVHKLSSNETPLGASPRAIEAFQKAAFNL CCCCCCCCCCCCCCEEHEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC ERYPDGQANALKEAIAAVHGLNAANILCGNGSDELLGLLCQTYLGPGDEGIVTQHGFLVY CCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEECCEEEE RIQIAASGGTPVTVSERDERVDVDAIIAAVTERTRIVFIANPGNPTGTYVPVDEVRRLHA EEEEEECCCCEEEECCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCEECHHHHHHHHH ALPAGALLVLDAAYAEYVRRNDYEAGLELVSSNRNVVMTRTFSKIYGLAGLRIGWMYAPR HCCCCHHEEHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEHHHHHCCCCCEEEEEECCH DVVEALDRVRGPFNLNAPAIAAGAAAIRDQAFIAEAGDHNQKWLAIVSQALTKIGLRVTP HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHCCCEECC SVTNFVLIHFPAEAGMSAGDADSYLTSRGFILRAVGAYGFPNALRMTIGTKEANEGVVAA CCCEEEEEEECHHCCCCCCCCHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHH LTEFMGRK HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]