| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397749
Identifier: 150397749
GI number: 150397749
Start: 2649454
End: 2650206
Strand: Reverse
Name: 150397749
Synonym: Smed_2551
Alternate gene names: NA
Gene position: 2650206-2649454 (Counterclockwise)
Preceding gene: 150397752
Following gene: 150397748
Centisome position: 70.08
GC content: 64.14
Gene sequence:
>753_bases ATGTCGTCCATGCACACCGATATCGTCGATCTCCGCCAATTCTACCACTCCGAGCTCGGCCGAATGGCGGAGCAATCGGT CAGCGCGGCGCTTGCTTCAATCTGGGCACGGCTGCCTGAAGAGAGACTCCTCGGGCTTGGTTACGCCGTACCGTATCTGG AGCGCTTCCGTGCCGATACGGAGCGGACCTTCGCCTTCATGCCGGCCGGCCAGGGTGCAGTGAACTGGCCGGTCGCGGAC CTTTCTTCGACGGCACTGGTTTTCGATGAAGAACTGCCATTGCCGGATTCCTCGATCGATCGCGTATTGATGGTCCATTC TCTTGAGTTTGCCGAGAGCCCGCGCGAGACGATGAAGGAGATCTGGCGTGTCCTGGCGCCCGGCGGACGCCTGATCATCG TGGTGCCGAACCGCCGCGGGGTGTGGGCGCAGATGGAGCACACGCCTTTCGGCTCGGGGCGGCCCTATTCGCGCGGACAA TTGACTGCGCTTCTGCGCGAAACGAACTTCACGCCCGGCGCCACCTCGGAAGCGCTGTTCTTTCCGCCCTCGAAACGCAA GCTTGCACTTCGGCTGCGCCACGGCCTCGAACGGTTTGGTCGTTCGCTCTGGCCCGCCTTTTCGGGCGTGATCATCGTCG AGGCGCAGAAACGGCTTTATCAGGGCCTGCCCGTGGCGGCGCGTGCCTCGCGGCGCGTCTTTGTGCCGGTGCTCGCCCCG CGCGGCATACCCAGCACGCGCAGCCGACCATAG
Upstream 100 bases:
>100_bases ATGATTGGTCCTCCGATCGGTGCCGGTTATCGGGACGGGGCGATCCCGTTCGATCGAATGTAGCGAGGCTCGCCTTGAAG TCTACCGCTTCGAGTCTAAC
Downstream 100 bases:
>100_bases GGAAACCGACACAGCGGAGGCCGCCAGCATGCCACGGCCGCACTCGACAAACTCCACCGTCCCCGGTATTGGCTGGACCG CATTCTCCCCGTGAAAGCTG
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MSSMHTDIVDLRQFYHSELGRMAEQSVSAALASIWARLPEERLLGLGYAVPYLERFRADTERTFAFMPAGQGAVNWPVAD LSSTALVFDEELPLPDSSIDRVLMVHSLEFAESPRETMKEIWRVLAPGGRLIIVVPNRRGVWAQMEHTPFGSGRPYSRGQ LTALLRETNFTPGATSEALFFPPSKRKLALRLRHGLERFGRSLWPAFSGVIIVEAQKRLYQGLPVAARASRRVFVPVLAP RGIPSTRSRP
Sequences:
>Translated_250_residues MSSMHTDIVDLRQFYHSELGRMAEQSVSAALASIWARLPEERLLGLGYAVPYLERFRADTERTFAFMPAGQGAVNWPVAD LSSTALVFDEELPLPDSSIDRVLMVHSLEFAESPRETMKEIWRVLAPGGRLIIVVPNRRGVWAQMEHTPFGSGRPYSRGQ LTALLRETNFTPGATSEALFFPPSKRKLALRLRHGLERFGRSLWPAFSGVIIVEAQKRLYQGLPVAARASRRVFVPVLAP RGIPSTRSRP >Mature_249_residues SSMHTDIVDLRQFYHSELGRMAEQSVSAALASIWARLPEERLLGLGYAVPYLERFRADTERTFAFMPAGQGAVNWPVADL SSTALVFDEELPLPDSSIDRVLMVHSLEFAESPRETMKEIWRVLAPGGRLIIVVPNRRGVWAQMEHTPFGSGRPYSRGQL TALLRETNFTPGATSEALFFPPSKRKLALRLRHGLERFGRSLWPAFSGVIIVEAQKRLYQGLPVAARASRRVFVPVLAPR GIPSTRSRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 28010; Mature: 27878
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSMHTDIVDLRQFYHSELGRMAEQSVSAALASIWARLPEERLLGLGYAVPYLERFRADT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH ERTFAFMPAGQGAVNWPVADLSSTALVFDEELPLPDSSIDRVLMVHSLEFAESPRETMKE HHEEEEECCCCCCCCCCHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH IWRVLAPGGRLIIVVPNRRGVWAQMEHTPFGSGRPYSRGQLTALLRETNFTPGATSEALF HHHHHCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEE FPPSKRKLALRLRHGLERFGRSLWPAFSGVIIVEAQKRLYQGLPVAARASRRVFVPVLAP ECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHCCCCHHHHCCCEEEEEEECC RGIPSTRSRP CCCCCCCCCC >Mature Secondary Structure SSMHTDIVDLRQFYHSELGRMAEQSVSAALASIWARLPEERLLGLGYAVPYLERFRADT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH ERTFAFMPAGQGAVNWPVADLSSTALVFDEELPLPDSSIDRVLMVHSLEFAESPRETMKE HHEEEEECCCCCCCCCCHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH IWRVLAPGGRLIIVVPNRRGVWAQMEHTPFGSGRPYSRGQLTALLRETNFTPGATSEALF HHHHHCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEE FPPSKRKLALRLRHGLERFGRSLWPAFSGVIIVEAQKRLYQGLPVAARASRRVFVPVLAP ECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHCCCCHHHHCCCEEEEEEECC RGIPSTRSRP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6209404 [H]