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The map label for this gene is viuA [H]

Identifier: 150397694

GI number: 150397694

Start: 2579143

End: 2581281

Strand: Reverse

Name: viuA [H]

Synonym: Smed_2495

Alternate gene names: 150397694

Gene position: 2581281-2579143 (Counterclockwise)

Preceding gene: 150397695

Following gene: 150397685

Centisome position: 68.25

GC content: 56.52

Gene sequence:

>2139_bases
ATGACATTTTCTAAGAGATTGCAGCCGTTTCTTGGCTGCACGGCAATCGCAATCGTCGCAACGGCAGTATCGATCGGGCC
AGGCACGCGCATTGCGATGGCTCAGGACGCGACGCCGAGCGATGAGGATGCCGCGACGACGCTGGCGCCGATTATCATCA
CTGGCGAGAAATTCGGCCGTGATCAGTTCACCACCTTCACCAGTGTCGAGGTTTTCACAGGCGGAGAACTTCACGATCTC
GTCCGACCGACACTCAATGATGCGCTGAACAGCTCACCCAACATCCGTGCCTTCATGAGTGGCAGAGGTAATTCCGACAT
TGTCATCCGCGGTTTGAGCTCGGAGGGTGTAACGGCTCCGAGCCGCTCGAACCCGGTGATTTCGGTGGTCGTGGACGGCG
CAGAACAGGGTGTCGAGGCAACCCGGCGCGGGACGCGAGGCCTCTGGGACGTCGAGCAGGTCGAAGTATTGCGTGGTCCG
CAATCTACGCTTCAGGGACGCAACGCGCTCGCGGGATCCGTCATCATCAAGACGAAAGATCCGACTTATACCCCCGAAGC
CAGTATTGAAGGCCTGATCGGAACCGACGAGTACAAATCCGGCGCCTTTGCCGTTTCGGCGCCGATCGTCGAAGACGAGC
TGGCATTTCGTATCTCCGGGCAAATCTTTCGCCGGGACAACGACATCGACTATGTCGATCCGTCCATTTCGGACGTGGGC
GAAGAGGAGTTCGAGGAAATTCGCGGCAAGCTGCTCTGGGAGCCTGCAGAAATACCGGGCCTCCGGGGGCTGTTTACCGT
TAGCCGTACGCATGACAAACCGGCATGGGCTCTGGTGAGCGGTCCCGATTTCTTCGCCAGACGATTCGATGATACGACTG
CAGAACGGCGCGATACTTACGTTAACCGCTACATCGCCGACCTGACCTACGAGATCAACGAGGACTGGAAGATTCAGTCG
ATTACGTCGTTCGTAGACACGGACGTGGAGATTACTTCTCCTCAAACGCCGACGCTTCAACAGTTCCAACTCATCCGTGA
TGACACACGCGAGGGCGGAGACTTCTCCCAGGATATCCGTCTCACTTACGGATCGGCGGAGTCTCAATTTTCGGGCGTCT
TCGGTCTTTTCGCAGGCCGATCCACCTTCGATCTCGACTCGAACATCCGGGTGGTGGCAGATCCAGTCACCCCGTTCATC
TTGCCGTTCCAGCAGCTACAGGCGAAGAACAAGAGCGAGACGACCGCTCTGTACGCGGACACCCGCTACGAGTTTGTCGA
TCGATGGACGCTGCTGGCCGGCGGTCGGCTGGTCCATGACAAGGTCTCGGCCAACTACACGGGCAGCCTGCTGGACGCCT
CCACCTTCGGATATGTTCCGCTTACGGAGAACAATTCGGTCTCAAACACCGAATTCCTGCCCAAGATCGGCCTTGCCTTT
GAACTCGACGAGAACCAGAATCTCGCCGCTACCATCAGTAAAGGCTACCGCCCGGGCTATTCGGAACTCATTATCGGCAC
GACCGACATCAATACGGTCAGGCCGGAATCTCTCTGGGCCTATGAACTTGCTTATCGTTCCAAGTGGCTGGAGGACCGTC
TGCAGGTGAACGGGAACGTCTTCTACTACGATTACACGAACCAGCAGGTTCCAATCGAATTCGATCCTCGCTTCCCAGCC
CAGACGATCAGTCTCAATGCAGCCGAATCTCATTCCTATGGTGCCGAAATCGAAGTTCGTTACGGCTTCGATTCTGGCCT
AGAGCTCTTCTCTGGGCTCGGCCTCATGAAGTCGAAGTTTGATAAGGGCGACTTCAAGGGCAAGGAATTTCCCGAAGCGC
CATCGCTCACCGCCTCTTTCGGTGGCGTCTACAAGCATGAAAGCGGTTTCTTCGCAGGCGGCGACGTGTCCTTCACGGAC
GGCTACTACAGCAAAGGCGACGTGAAGAATGTTCGTGCCCTGGATTCGTTTACTGTTGTAAATGCGAATATCGGCTACGA
AAAAGACAACTTGAAGATCACTGCGTTTGCCAGGAATCTGTTCGACGAGGAATACCTGACCTCGATTTCGAGCAATGGCA
ACCTGGCGACCATCGGCGACGGGCGCTCGTTCGGCGTACGCGTCAACGCCACCTTCTGA

Upstream 100 bases:

>100_bases
CCACCGCGGATAGTCAAATCAGATTGCGAAAAGTGGATTGATCTACTCATCTTTTGTCCATAATTGTCCTTTTGCTAGGG
GTTACCAATGTGAGGGGATA

Downstream 100 bases:

>100_bases
TTAATCTGACAAGCCATTCAGGCTTCTTCAAACCCGCCAGGTTTTTCAGCCCGGCGGGTTTTCGTTCTATAGGTCAGCGT
CTTCCACCGGAACACAGATC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 712; Mature: 711

Protein sequence:

>712_residues
MTFSKRLQPFLGCTAIAIVATAVSIGPGTRIAMAQDATPSDEDAATTLAPIIITGEKFGRDQFTTFTSVEVFTGGELHDL
VRPTLNDALNSSPNIRAFMSGRGNSDIVIRGLSSEGVTAPSRSNPVISVVVDGAEQGVEATRRGTRGLWDVEQVEVLRGP
QSTLQGRNALAGSVIIKTKDPTYTPEASIEGLIGTDEYKSGAFAVSAPIVEDELAFRISGQIFRRDNDIDYVDPSISDVG
EEEFEEIRGKLLWEPAEIPGLRGLFTVSRTHDKPAWALVSGPDFFARRFDDTTAERRDTYVNRYIADLTYEINEDWKIQS
ITSFVDTDVEITSPQTPTLQQFQLIRDDTREGGDFSQDIRLTYGSAESQFSGVFGLFAGRSTFDLDSNIRVVADPVTPFI
LPFQQLQAKNKSETTALYADTRYEFVDRWTLLAGGRLVHDKVSANYTGSLLDASTFGYVPLTENNSVSNTEFLPKIGLAF
ELDENQNLAATISKGYRPGYSELIIGTTDINTVRPESLWAYELAYRSKWLEDRLQVNGNVFYYDYTNQQVPIEFDPRFPA
QTISLNAAESHSYGAEIEVRYGFDSGLELFSGLGLMKSKFDKGDFKGKEFPEAPSLTASFGGVYKHESGFFAGGDVSFTD
GYYSKGDVKNVRALDSFTVVNANIGYEKDNLKITAFARNLFDEEYLTSISSNGNLATIGDGRSFGVRVNATF

Sequences:

>Translated_712_residues
MTFSKRLQPFLGCTAIAIVATAVSIGPGTRIAMAQDATPSDEDAATTLAPIIITGEKFGRDQFTTFTSVEVFTGGELHDL
VRPTLNDALNSSPNIRAFMSGRGNSDIVIRGLSSEGVTAPSRSNPVISVVVDGAEQGVEATRRGTRGLWDVEQVEVLRGP
QSTLQGRNALAGSVIIKTKDPTYTPEASIEGLIGTDEYKSGAFAVSAPIVEDELAFRISGQIFRRDNDIDYVDPSISDVG
EEEFEEIRGKLLWEPAEIPGLRGLFTVSRTHDKPAWALVSGPDFFARRFDDTTAERRDTYVNRYIADLTYEINEDWKIQS
ITSFVDTDVEITSPQTPTLQQFQLIRDDTREGGDFSQDIRLTYGSAESQFSGVFGLFAGRSTFDLDSNIRVVADPVTPFI
LPFQQLQAKNKSETTALYADTRYEFVDRWTLLAGGRLVHDKVSANYTGSLLDASTFGYVPLTENNSVSNTEFLPKIGLAF
ELDENQNLAATISKGYRPGYSELIIGTTDINTVRPESLWAYELAYRSKWLEDRLQVNGNVFYYDYTNQQVPIEFDPRFPA
QTISLNAAESHSYGAEIEVRYGFDSGLELFSGLGLMKSKFDKGDFKGKEFPEAPSLTASFGGVYKHESGFFAGGDVSFTD
GYYSKGDVKNVRALDSFTVVNANIGYEKDNLKITAFARNLFDEEYLTSISSNGNLATIGDGRSFGVRVNATF
>Mature_711_residues
TFSKRLQPFLGCTAIAIVATAVSIGPGTRIAMAQDATPSDEDAATTLAPIIITGEKFGRDQFTTFTSVEVFTGGELHDLV
RPTLNDALNSSPNIRAFMSGRGNSDIVIRGLSSEGVTAPSRSNPVISVVVDGAEQGVEATRRGTRGLWDVEQVEVLRGPQ
STLQGRNALAGSVIIKTKDPTYTPEASIEGLIGTDEYKSGAFAVSAPIVEDELAFRISGQIFRRDNDIDYVDPSISDVGE
EEFEEIRGKLLWEPAEIPGLRGLFTVSRTHDKPAWALVSGPDFFARRFDDTTAERRDTYVNRYIADLTYEINEDWKIQSI
TSFVDTDVEITSPQTPTLQQFQLIRDDTREGGDFSQDIRLTYGSAESQFSGVFGLFAGRSTFDLDSNIRVVADPVTPFIL
PFQQLQAKNKSETTALYADTRYEFVDRWTLLAGGRLVHDKVSANYTGSLLDASTFGYVPLTENNSVSNTEFLPKIGLAFE
LDENQNLAATISKGYRPGYSELIIGTTDINTVRPESLWAYELAYRSKWLEDRLQVNGNVFYYDYTNQQVPIEFDPRFPAQ
TISLNAAESHSYGAEIEVRYGFDSGLELFSGLGLMKSKFDKGDFKGKEFPEAPSLTASFGGVYKHESGFFAGGDVSFTDG
YYSKGDVKNVRALDSFTVVNANIGYEKDNLKITAFARNLFDEEYLTSISSNGNLATIGDGRSFGVRVNATF

Specific function: Receptor for ferric vibriobactin [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug [H]

EC number: NA

Molecular weight: Translated: 78376; Mature: 78244

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSKRLQPFLGCTAIAIVATAVSIGPGTRIAMAQDATPSDEDAATTLAPIIITGEKFGR
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHEEEEEEEECCCCCC
DQFTTFTSVEVFTGGELHDLVRPTLNDALNSSPNIRAFMSGRGNSDIVIRGLSSEGVTAP
CCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCC
SRSNPVISVVVDGAEQGVEATRRGTRGLWDVEQVEVLRGPQSTLQGRNALAGSVIIKTKD
CCCCCEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHCCCCCEECEEEEEECC
PTYTPEASIEGLIGTDEYKSGAFAVSAPIVEDELAFRISGQIFRRDNDIDYVDPSISDVG
CCCCCCCCCCCEECCCCCCCCEEEEECCCCCCCEEEEECCEEEEECCCCCEECCCHHHCC
EEEFEEIRGKLLWEPAEIPGLRGLFTVSRTHDKPAWALVSGPDFFARRFDDTTAERRDTY
HHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHCCCCHHHHHHHH
VNRYIADLTYEINEDWKIQSITSFVDTDVEITSPQTPTLQQFQLIRDDTREGGDFSQDIR
HHHHHEEEEEEECCCEEEEHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEE
LTYGSAESQFSGVFGLFAGRSTFDLDSNIRVVADPVTPFILPFQQLQAKNKSETTALYAD
EEECCCCCHHCCEEEEECCCCEEECCCCCEEEECCCCCHHCCHHHHHCCCCCCCEEEEEC
TRYEFVDRWTLLAGGRLVHDKVSANYTGSLLDASTFGYVPLTENNSVSNTEFLPKIGLAF
CHHHHHHHEEEEECCEEEEECCCCCCCCCEECCCCCCEEEECCCCCCCCCCCCCCCCEEE
ELDENQNLAATISKGYRPGYSELIIGTTDINTVRPESLWAYELAYRSKWLEDRLQVNGNV
EECCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEECCEE
FYYDYTNQQVPIEFDPRFPAQTISLNAAESHSYGAEIEVRYGFDSGLELFSGLGLMKSKF
EEEECCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHCCCHHHHCC
DKGDFKGKEFPEAPSLTASFGGVYKHESGFFAGGDVSFTDGYYSKGDVKNVRALDSFTVV
CCCCCCCCCCCCCCCCCHHCCCEEEECCCEEECCCEEECCCCCCCCCCCCEEEECCEEEE
NANIGYEKDNLKITAFARNLFDEEYLTSISSNGNLATIGDGRSFGVRVNATF
ECCCCCCCCCEEEEEEHHHHCCHHHHHHHCCCCCEEEECCCCEEEEEEEEEC
>Mature Secondary Structure 
TFSKRLQPFLGCTAIAIVATAVSIGPGTRIAMAQDATPSDEDAATTLAPIIITGEKFGR
CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHEEEEEEEECCCCCC
DQFTTFTSVEVFTGGELHDLVRPTLNDALNSSPNIRAFMSGRGNSDIVIRGLSSEGVTAP
CCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCC
SRSNPVISVVVDGAEQGVEATRRGTRGLWDVEQVEVLRGPQSTLQGRNALAGSVIIKTKD
CCCCCEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHCCCCCEECEEEEEECC
PTYTPEASIEGLIGTDEYKSGAFAVSAPIVEDELAFRISGQIFRRDNDIDYVDPSISDVG
CCCCCCCCCCCEECCCCCCCCEEEEECCCCCCCEEEEECCEEEEECCCCCEECCCHHHCC
EEEFEEIRGKLLWEPAEIPGLRGLFTVSRTHDKPAWALVSGPDFFARRFDDTTAERRDTY
HHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHCCCCHHHHHHHH
VNRYIADLTYEINEDWKIQSITSFVDTDVEITSPQTPTLQQFQLIRDDTREGGDFSQDIR
HHHHHEEEEEEECCCEEEEHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEE
LTYGSAESQFSGVFGLFAGRSTFDLDSNIRVVADPVTPFILPFQQLQAKNKSETTALYAD
EEECCCCCHHCCEEEEECCCCEEECCCCCEEEECCCCCHHCCHHHHHCCCCCCCEEEEEC
TRYEFVDRWTLLAGGRLVHDKVSANYTGSLLDASTFGYVPLTENNSVSNTEFLPKIGLAF
CHHHHHHHEEEEECCEEEEECCCCCCCCCEECCCCCCEEEECCCCCCCCCCCCCCCCEEE
ELDENQNLAATISKGYRPGYSELIIGTTDINTVRPESLWAYELAYRSKWLEDRLQVNGNV
EECCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEECCEE
FYYDYTNQQVPIEFDPRFPAQTISLNAAESHSYGAEIEVRYGFDSGLELFSGLGLMKSKF
EEEECCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHCCCHHHHCC
DKGDFKGKEFPEAPSLTASFGGVYKHESGFFAGGDVSFTDGYYSKGDVKNVRALDSFTVV
CCCCCCCCCCCCCCCCCHHCCCEEEECCCEEECCCEEECCCCCCCCCCCCEEEECCEEEE
NANIGYEKDNLKITAFARNLFDEEYLTSISSNGNLATIGDGRSFGVRVNATF
ECCCCCCCCCEEEEEEHHHHCCHHHHHHHCCCCCEEEECCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1317381 [H]