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The map label for this gene is viuB [H]

Identifier: 150397695

GI number: 150397695

Start: 2581432

End: 2582433

Strand: Reverse

Name: viuB [H]

Synonym: Smed_2496

Alternate gene names: 150397695

Gene position: 2582433-2581432 (Counterclockwise)

Preceding gene: 150397697

Following gene: 150397694

Centisome position: 68.28

GC content: 56.29

Gene sequence:

>1002_bases
ATGAAAACGACTACATTGATCGAGGTGCACTCGGATCTTGGCTTGCAGATGATCAAGGCCCGAGTAGTCGAACGTTCGTT
GCCGTTCGTTGAGAAGTCCGATGGACTGATCATACATTTGCCGCTGGGTCAAATTCACGCTTTCGGGGAAAATGGCGGCT
TGCGACTGACGCTTCATGCAAGTGATCACATGAAGCTACACCTCCTCCAGGAAGCGGTCGATCACCGTCTCGACGAAGCG
GCTGTTGCCCTTGACCGCCGATGGTCGCTGACCAAGCTAGGGCTTGTTCCGCCGAATTTGACCTTCGCGATAGTGGAGTC
CTGTGAGCGCGTCCGTCCGTCCTACTATCGGGTGCGACTTTCCGGAGCTTCACTTGAACGTTTCTCTCGTGATGGTCTGC
ATTTCCGGCTGCTGTTCCCATCCGAAAACCATATTGGTCAATGGCCGGTCATTTCGGAAAGCGGGCGCGTGGAATGGCCC
GGCGGCATAAGTGAATGGCATCGGCCGGTCTATACGACCCGCAGTGTCAATCTGGAAAAAGGCACCCTCGACTTTGACGT
CTTCGCGCATGAAGGAGGGCGCGTAACCGAATGGTGCAAGACGTTGCATCCGGGAATGGACGCGGCCATCATGGGGCCGG
GAGGAGAGTGGCTGCCAGACGCGCGATGGATTGCATTGTTTGGCGATGAGACCGCGCTGCCGGCAATCGCCCGCATATTG
GAAAGCCTTCCCGAGGAGACCAGTGGTGTAGCGACTATCCTCATATCTGACGCGGGTGATGTGCAGCACCTCAACACGAC
AAGTAGCGTGGCCGTCCGATGGCTGGTGCGCGGCGATGGCATATCGCTGCTCGACGAATTGAAAAAGCTTCGAATTCCGG
ACGTCGATCGTTTTGTCTGGATTGCGAGCGAGCGATCCGAGGTCAATGAGGCTCGGAATATTTTGGTTGCTCGCGGCATT
CAAAGGGCGGAGATGCGTGTGGCATCCTACTGGTCTCGTTAA

Upstream 100 bases:

>100_bases
CGAAAATGCCTCCGACAAGCCGAACGCCTCAGATTGTCGTGACCCGTTCGATCGCCTATGCAAGAATTTAAAAAGTCTAA
TCGCACGTCACAGGATTACA

Downstream 100 bases:

>100_bases
TTCCCTTGTTCTGTTTCAGAGAAGAGTTGTGATGTGGTGCAAAACTGCAACCACCGCGGATAGTCAAATCAGATTGCGAA
AAGTGGATTGATCTACTCAT

Product: siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MKTTTLIEVHSDLGLQMIKARVVERSLPFVEKSDGLIIHLPLGQIHAFGENGGLRLTLHASDHMKLHLLQEAVDHRLDEA
AVALDRRWSLTKLGLVPPNLTFAIVESCERVRPSYYRVRLSGASLERFSRDGLHFRLLFPSENHIGQWPVISESGRVEWP
GGISEWHRPVYTTRSVNLEKGTLDFDVFAHEGGRVTEWCKTLHPGMDAAIMGPGGEWLPDARWIALFGDETALPAIARIL
ESLPEETSGVATILISDAGDVQHLNTTSSVAVRWLVRGDGISLLDELKKLRIPDVDRFVWIASERSEVNEARNILVARGI
QRAEMRVASYWSR

Sequences:

>Translated_333_residues
MKTTTLIEVHSDLGLQMIKARVVERSLPFVEKSDGLIIHLPLGQIHAFGENGGLRLTLHASDHMKLHLLQEAVDHRLDEA
AVALDRRWSLTKLGLVPPNLTFAIVESCERVRPSYYRVRLSGASLERFSRDGLHFRLLFPSENHIGQWPVISESGRVEWP
GGISEWHRPVYTTRSVNLEKGTLDFDVFAHEGGRVTEWCKTLHPGMDAAIMGPGGEWLPDARWIALFGDETALPAIARIL
ESLPEETSGVATILISDAGDVQHLNTTSSVAVRWLVRGDGISLLDELKKLRIPDVDRFVWIASERSEVNEARNILVARGI
QRAEMRVASYWSR
>Mature_333_residues
MKTTTLIEVHSDLGLQMIKARVVERSLPFVEKSDGLIIHLPLGQIHAFGENGGLRLTLHASDHMKLHLLQEAVDHRLDEA
AVALDRRWSLTKLGLVPPNLTFAIVESCERVRPSYYRVRLSGASLERFSRDGLHFRLLFPSENHIGQWPVISESGRVEWP
GGISEWHRPVYTTRSVNLEKGTLDFDVFAHEGGRVTEWCKTLHPGMDAAIMGPGGEWLPDARWIALFGDETALPAIARIL
ESLPEETSGVATILISDAGDVQHLNTTSSVAVRWLVRGDGISLLDELKKLRIPDVDRFVWIASERSEVNEARNILVARGI
QRAEMRVASYWSR

Specific function: Involved in intracellular removal of iron from iron- vibriobactin complex. Vibriobactin is an iron-chelating compound involved in the transport of iron from the bacterial environment into the cell cytoplasm [H]

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqjH [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=230, Percent_Identity=27.8260869565217, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 37339; Mature: 37339

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTTLIEVHSDLGLQMIKARVVERSLPFVEKSDGLIIHLPLGQIHAFGENGGLRLTLHA
CCCEEEEEECCCCCHHHHHHHHHHHCCCCEECCCCEEEEECHHHEEEECCCCCEEEEEEC
SDHMKLHLLQEAVDHRLDEAAVALDRRWSLTKLGLVPPNLTFAIVESCERVRPSYYRVRL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEE
SGASLERFSRDGLHFRLLFPSENHIGQWPVISESGRVEWPGGISEWHRPVYTTRSVNLEK
CCCCHHHHCCCCCEEEEECCCCCCCCCCCEECCCCCEECCCCHHHHCCCEEEEEECCCCC
GTLDFDVFAHEGGRVTEWCKTLHPGMDAAIMGPGGEWLPDARWIALFGDETALPAIARIL
CCEEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHH
ESLPEETSGVATILISDAGDVQHLNTTSSVAVRWLVRGDGISLLDELKKLRIPDVDRFVW
HHCCCCCCCEEEEEEECCCCCEECCCCHHEEEEEEEECCCHHHHHHHHHCCCCCCCEEEE
IASERSEVNEARNILVARGIQRAEMRVASYWSR
EECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKTTTLIEVHSDLGLQMIKARVVERSLPFVEKSDGLIIHLPLGQIHAFGENGGLRLTLHA
CCCEEEEEECCCCCHHHHHHHHHHHCCCCEECCCCEEEEECHHHEEEECCCCCEEEEEEC
SDHMKLHLLQEAVDHRLDEAAVALDRRWSLTKLGLVPPNLTFAIVESCERVRPSYYRVRL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEE
SGASLERFSRDGLHFRLLFPSENHIGQWPVISESGRVEWPGGISEWHRPVYTTRSVNLEK
CCCCHHHHCCCCCEEEEECCCCCCCCCCCEECCCCCEECCCCHHHHCCCEEEEEECCCCC
GTLDFDVFAHEGGRVTEWCKTLHPGMDAAIMGPGGEWLPDARWIALFGDETALPAIARIL
CCEEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHH
ESLPEETSGVATILISDAGDVQHLNTTSSVAVRWLVRGDGISLLDELKKLRIPDVDRFVW
HHCCCCCCCEEEEEEECCCCCEECCCCHHEEEEEEEECCCHHHHHHHHHCCCCCCCEEEE
IASERSEVNEARNILVARGIQRAEMRVASYWSR
EECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083157 [H]