| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is mtlK [H]
Identifier: 150397553
GI number: 150397553
Start: 2428481
End: 2429965
Strand: Reverse
Name: mtlK [H]
Synonym: Smed_2353
Alternate gene names: 150397553
Gene position: 2429965-2428481 (Counterclockwise)
Preceding gene: 150397554
Following gene: 150397552
Centisome position: 64.25
GC content: 60.74
Gene sequence:
>1485_bases ATGACGACCAAACTCTCGCTTGCCACGCTCGATGCGGTCAGGGCCAAGGCTGGCATTCCGAATTATGGCCGGCACGATCT CAGGGCCGGCATCGTTCATTTCGGCGTCGGAAACTTTCATCGCGCCCATCAGGCGGTTTATCTCGACGATCTCTTCAACA TGGGACGCGACCGGGATTGGGCGATTATCGGCGCGGGTGTCCTTCCATCGGACAGGATCATGCGCGACAAGCTCGAGGCG CAGGACTTCCTGACGACGGTGGTGGAGCAGGACAACAACCGGACGGGCGCACATGTCACGGGGGCCATGATCGCTTATCT CGAGCCGGGTGACGTGCCGGCGATCGTGGCGCAACTCGCGAGCCCCTTAATCCGCATCGTTTCCTTGACCATCACCGAAG GCGGCTATTTCATCGATCCAGCTTCCGGGGTCTTCGACCCTGCCCATCCGGCTATCGCCGAGGATGCGCGAAACCCACTG GCGCCGAAAACCGTCTTCGGTCTTATCCTTGCCGGGCTCGCCGAACGGAGAGCCAAGGGCATTCCGCCGTTTACGATCAT GTCCTGCGACAACATCCCCGGAAACGGCGAAGTCACCCACGCTGCCGTTTCCGGCCTTGCGCGCCTGTCGGATCCTGGCT TCGCGGATTGGATCGACGCCAATGTCGCCTTTCCCAATGGCATGGTCGATCGCATCACGCCTGCAACCGGCACGCGCGAG ATCGGCATCGTTGTGTCGGAATACGGGATCGACGATGCCTGGCCGGTCTTCTGCGAGGAGTTCAAGCAATGGGTGCTGGA GGACCGCTTCCCGCAGGGTCGCCCGGCGCTCGAAGAGGTCGGCGTGCAGTTCGTCCCCGATGTGGCGCCGTACGAGCACA TGAAGATACGCATTCTCAACGGCGGCCATGCTGCCATCGCCTATCCGGCGGCATTGCTCGACATACACTTCGTCCATGAG GCGATGGCGGAACCGCTGATCCGCGCTTTCCTGGAGAAACTGGAGCATGAAGAGATCATCCCCGTCATTCCGCCGGTTCC GGACACGGATCTGAGGGAGTATTACAAGCTCATCGAAACGCGTTTTTCAAACCCGAAGATCGGTGACACGGTTGCTCGGC TGGCGCAGGACGGATCGAACCGGCAGCCGAAATTCATCCTGCCATCGACGGCGGACCGCCTGCGCCGCGGCGACGACGTC GTCGGTCTGTCGCTGGTCTCGGCGCTGTGGTGCCGCTACCTCGCCGGAAAATCCGACAGCGGCAGGGAGATCCTGTTCAA CGACCCAAATTCGGACCGGCTGCATGCCGCTGCGCTTTTGGCAAAGGACGACCCCATGGAATTCCTCGCGCTTTCCGATA TTTTCGGCGATGTCGCGCAATCCGATCTTTTCCGTCGCCGATTTTCCCACGCCTTGAAAACACTTTGGGAAAAAGGTACG CGCCAAACGCTCCAGGTCTATCTGGACGGAAAGCTCGGGGAATGA
Upstream 100 bases:
>100_bases CTCGCCTCGTCCGAAAGCGACTACGTTGTCGCTCAGACCTACAACGTCGACGGCGGCAACTGGATGAGCTGAGACGCGGG TTCTCGAAAGGAACAACAGG
Downstream 100 bases:
>100_bases CGATGGCGGGGAGCACCTCGAAGCTGGTGATTTTCGATTGTGATGGCGTGTTGGTGGACAGCGAGCCGATTTCGCTTGAG GTTCTTGTGGAAGCGCTGGC
Product: mannitol dehydrogenase domain-containing protein
Products: NA
Alternate protein names: M2DH; MDH [H]
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MTTKLSLATLDAVRAKAGIPNYGRHDLRAGIVHFGVGNFHRAHQAVYLDDLFNMGRDRDWAIIGAGVLPSDRIMRDKLEA QDFLTTVVEQDNNRTGAHVTGAMIAYLEPGDVPAIVAQLASPLIRIVSLTITEGGYFIDPASGVFDPAHPAIAEDARNPL APKTVFGLILAGLAERRAKGIPPFTIMSCDNIPGNGEVTHAAVSGLARLSDPGFADWIDANVAFPNGMVDRITPATGTRE IGIVVSEYGIDDAWPVFCEEFKQWVLEDRFPQGRPALEEVGVQFVPDVAPYEHMKIRILNGGHAAIAYPAALLDIHFVHE AMAEPLIRAFLEKLEHEEIIPVIPPVPDTDLREYYKLIETRFSNPKIGDTVARLAQDGSNRQPKFILPSTADRLRRGDDV VGLSLVSALWCRYLAGKSDSGREILFNDPNSDRLHAAALLAKDDPMEFLALSDIFGDVAQSDLFRRRFSHALKTLWEKGT RQTLQVYLDGKLGE
Sequences:
>Translated_494_residues MTTKLSLATLDAVRAKAGIPNYGRHDLRAGIVHFGVGNFHRAHQAVYLDDLFNMGRDRDWAIIGAGVLPSDRIMRDKLEA QDFLTTVVEQDNNRTGAHVTGAMIAYLEPGDVPAIVAQLASPLIRIVSLTITEGGYFIDPASGVFDPAHPAIAEDARNPL APKTVFGLILAGLAERRAKGIPPFTIMSCDNIPGNGEVTHAAVSGLARLSDPGFADWIDANVAFPNGMVDRITPATGTRE IGIVVSEYGIDDAWPVFCEEFKQWVLEDRFPQGRPALEEVGVQFVPDVAPYEHMKIRILNGGHAAIAYPAALLDIHFVHE AMAEPLIRAFLEKLEHEEIIPVIPPVPDTDLREYYKLIETRFSNPKIGDTVARLAQDGSNRQPKFILPSTADRLRRGDDV VGLSLVSALWCRYLAGKSDSGREILFNDPNSDRLHAAALLAKDDPMEFLALSDIFGDVAQSDLFRRRFSHALKTLWEKGT RQTLQVYLDGKLGE >Mature_493_residues TTKLSLATLDAVRAKAGIPNYGRHDLRAGIVHFGVGNFHRAHQAVYLDDLFNMGRDRDWAIIGAGVLPSDRIMRDKLEAQ DFLTTVVEQDNNRTGAHVTGAMIAYLEPGDVPAIVAQLASPLIRIVSLTITEGGYFIDPASGVFDPAHPAIAEDARNPLA PKTVFGLILAGLAERRAKGIPPFTIMSCDNIPGNGEVTHAAVSGLARLSDPGFADWIDANVAFPNGMVDRITPATGTREI GIVVSEYGIDDAWPVFCEEFKQWVLEDRFPQGRPALEEVGVQFVPDVAPYEHMKIRILNGGHAAIAYPAALLDIHFVHEA MAEPLIRAFLEKLEHEEIIPVIPPVPDTDLREYYKLIETRFSNPKIGDTVARLAQDGSNRQPKFILPSTADRLRRGDDVV GLSLVSALWCRYLAGKSDSGREILFNDPNSDRLHAAALLAKDDPMEFLALSDIFGDVAQSDLFRRRFSHALKTLWEKGTR QTLQVYLDGKLGE
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1790779, Length=471, Percent_Identity=38.0042462845011, Blast_Score=304, Evalue=7e-84, Organism=Escherichia coli, GI1788497, Length=470, Percent_Identity=36.8085106382979, Blast_Score=302, Evalue=4e-83, Organism=Escherichia coli, GI1787823, Length=481, Percent_Identity=36.3825363825364, Blast_Score=289, Evalue=2e-79, Organism=Escherichia coli, GI48994885, Length=378, Percent_Identity=27.2486772486773, Blast_Score=95, Evalue=9e-21, Organism=Saccharomyces cerevisiae, GI6324401, Length=491, Percent_Identity=40.5295315682281, Blast_Score=380, Evalue=1e-106, Organism=Saccharomyces cerevisiae, GI6320765, Length=491, Percent_Identity=40.5295315682281, Blast_Score=380, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.67 [H]
Molecular weight: Translated: 54283; Mature: 54152
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00974 MANNITOL_DHGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKLSLATLDAVRAKAGIPNYGRHDLRAGIVHFGVGNFHRAHQAVYLDDLFNMGRDRDW CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCE AIIGAGVLPSDRIMRDKLEAQDFLTTVVEQDNNRTGAHVTGAMIAYLEPGDVPAIVAQLA EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCHHHHHHHHH SPLIRIVSLTITEGGYFIDPASGVFDPAHPAIAEDARNPLAPKTVFGLILAGLAERRAKG HHHHHHHHEEEECCCEEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC IPPFTIMSCDNIPGNGEVTHAAVSGLARLSDPGFADWIDANVAFPNGMVDRITPATGTRE CCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCEECCCCCHHCCCCCCCCCE IGIVVSEYGIDDAWPVFCEEFKQWVLEDRFPQGRPALEEVGVQFVPDVAPYEHMKIRILN EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEECCCCCCCCCEEEEEEE GGHAAIAYPAALLDIHFVHEAMAEPLIRAFLEKLEHEEIIPVIPPVPDTDLREYYKLIET CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH RFSNPKIGDTVARLAQDGSNRQPKFILPSTADRLRRGDDVVGLSLVSALWCRYLAGKSDS HCCCCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC GREILFNDPNSDRLHAAALLAKDDPMEFLALSDIFGDVAQSDLFRRRFSHALKTLWEKGT CCEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RQTLQVYLDGKLGE CEEEEEEECCCCCC >Mature Secondary Structure TTKLSLATLDAVRAKAGIPNYGRHDLRAGIVHFGVGNFHRAHQAVYLDDLFNMGRDRDW CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCE AIIGAGVLPSDRIMRDKLEAQDFLTTVVEQDNNRTGAHVTGAMIAYLEPGDVPAIVAQLA EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCHHHHHHHHH SPLIRIVSLTITEGGYFIDPASGVFDPAHPAIAEDARNPLAPKTVFGLILAGLAERRAKG HHHHHHHHEEEECCCEEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC IPPFTIMSCDNIPGNGEVTHAAVSGLARLSDPGFADWIDANVAFPNGMVDRITPATGTRE CCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCEECCCCCHHCCCCCCCCCE IGIVVSEYGIDDAWPVFCEEFKQWVLEDRFPQGRPALEEVGVQFVPDVAPYEHMKIRILN EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEECCCCCCCCCEEEEEEE GGHAAIAYPAALLDIHFVHEAMAEPLIRAFLEKLEHEEIIPVIPPVPDTDLREYYKLIET CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH RFSNPKIGDTVARLAQDGSNRQPKFILPSTADRLRRGDDVVGLSLVSALWCRYLAGKSDS HCCCCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC GREILFNDPNSDRLHAAALLAKDDPMEFLALSDIFGDVAQSDLFRRRFSHALKTLWEKGT CCEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RQTLQVYLDGKLGE CEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8254318 [H]