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The map label for this gene is ybaA [H]

Identifier: 150397420

GI number: 150397420

Start: 2297891

End: 2298244

Strand: Reverse

Name: ybaA [H]

Synonym: Smed_2220

Alternate gene names: 150397420

Gene position: 2298244-2297891 (Counterclockwise)

Preceding gene: 150397421

Following gene: 150397419

Centisome position: 60.77

GC content: 60.45

Gene sequence:

>354_bases
ATGGCCTATGTGGATGGTTTTATCGTAGCAGTGCCGACGGCCAATCTGGAGGCATACAAGAAGATGGCCAGCGAGGCGGG
TGCGGTCTGGAAGGAGCATGGCGCGCTCAATTACGTCGAATGCATCGGCGACGACGTTCCCCGCGGCGAACTCACTTCCT
TCCCGCGTGCGGTTCAGGCGACGGACGACGAGACGGTCGTCTTTTCATGGATCGTCTACCGGTCGCGGCAGGACCGCGAC
GCGATCGTCGCCAAGGTCATGGCGGATCCCAGGCTCCAGGGTGACGCGTGGAAGGATGTTTTCGATGGCAAGCGCCTGAT
CTATGGCGGGTTCGAGGCCTTTCTCGAACTTTAG

Upstream 100 bases:

>100_bases
CGCAAGCCGTTAAGCCAGCCATTAAAATGTCGCCTCCCCGTCGGAATCTGTACCCCTGGATCGTCCTTGTATTGTCTTTC
AAAGAATGGAGGAGACGAAA

Downstream 100 bases:

>100_bases
AGCCTTTCCTGTTCAAAGGGTAAAGTGGGGTGAGAATGGCGCAGACCGTCATCACCATGTCGACGACGGGGCAGGGGCTT
TACGAGTTCACAGCCGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MAYVDGFIVAVPTANLEAYKKMASEAGAVWKEHGALNYVECIGDDVPRGELTSFPRAVQATDDETVVFSWIVYRSRQDRD
AIVAKVMADPRLQGDAWKDVFDGKRLIYGGFEAFLEL

Sequences:

>Translated_117_residues
MAYVDGFIVAVPTANLEAYKKMASEAGAVWKEHGALNYVECIGDDVPRGELTSFPRAVQATDDETVVFSWIVYRSRQDRD
AIVAKVMADPRLQGDAWKDVFDGKRLIYGGFEAFLEL
>Mature_116_residues
AYVDGFIVAVPTANLEAYKKMASEAGAVWKEHGALNYVECIGDDVPRGELTSFPRAVQATDDETVVFSWIVYRSRQDRDA
IVAKVMADPRLQGDAWKDVFDGKRLIYGGFEAFLEL

Specific function: Unknown

COG id: COG5507

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786661, Length=116, Percent_Identity=51.7241379310345, Blast_Score=122, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009874 [H]

Pfam domain/function: PF07237 DUF1428 [H]

EC number: NA

Molecular weight: Translated: 13051; Mature: 12920

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYVDGFIVAVPTANLEAYKKMASEAGAVWKEHGALNYVECIGDDVPRGELTSFPRAVQA
CCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHCCCCHHHHHCCCCCCCCCCCCCCCEECC
TDDETVVFSWIVYRSRQDRDAIVAKVMADPRLQGDAWKDVFDGKRLIYGGFEAFLEL
CCCCEEEEHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEHHHHHHHCC
>Mature Secondary Structure 
AYVDGFIVAVPTANLEAYKKMASEAGAVWKEHGALNYVECIGDDVPRGELTSFPRAVQA
CCCCCEEEEECCCCHHHHHHHHHHHCCHHHHCCCCHHHHHCCCCCCCCCCCCCCCEECC
TDDETVVFSWIVYRSRQDRDAIVAKVMADPRLQGDAWKDVFDGKRLIYGGFEAFLEL
CCCCEEEEHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]