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The map label for this gene is yjbQ [C]

Identifier: 150397419

GI number: 150397419

Start: 2297433

End: 2297855

Strand: Reverse

Name: yjbQ [C]

Synonym: Smed_2219

Alternate gene names: 150397419

Gene position: 2297855-2297433 (Counterclockwise)

Preceding gene: 150397420

Following gene: 150397418

Centisome position: 60.76

GC content: 62.88

Gene sequence:

>423_bases
ATGGCGCAGACCGTCATCACCATGTCGACGACGGGGCAGGGGCTTTACGAGTTCACAGCCGAGGCCGGCGAATTCGTGCG
CGCCACCGGCGTGGCCGAGGGACTGCTCACGGTTTTTGTGCGCCATACCTCGGCTTCGCTGATCATCCAGGAGAATGCCG
ACCCGGACGTGAAACGTGACCTGGGTGCATTCTTCCACCGGTTGGTACCGCCGTCTTCCGATCCCTCGATGGACTGGATC
GTGCACAGGATGGAGGGGCCGGACGACATGCCCGCCCATATCAAGTCGGCACTGACACAGGTGTCGCTCGGCGTCCCCAT
CATGAAGGGGCGCCTGGCGCTTGGAACCTGGCAGGGGCTTTATCTCTTTGAGCACCGTGACCGGCCGCACCGTCGCGAGA
TCGTTCTGCACATCGGCAGTTGA

Upstream 100 bases:

>100_bases
GGAAGGATGTTTTCGATGGCAAGCGCCTGATCTATGGCGGGTTCGAGGCCTTTCTCGAACTTTAGAGCCTTTCCTGTTCA
AAGGGTAAAGTGGGGTGAGA

Downstream 100 bases:

>100_bases
GGATCGAGGCAACCGTTCGCCGCTGCCGTTTTCTCTTTCGGCGCGGCAGGCATTCTGCGTAGAGTGGAAGCGGGGCCGGT
TTCGGAGGAGAAAATGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAQTVITMSTTGQGLYEFTAEAGEFVRATGVAEGLLTVFVRHTSASLIIQENADPDVKRDLGAFFHRLVPPSSDPSMDWI
VHRMEGPDDMPAHIKSALTQVSLGVPIMKGRLALGTWQGLYLFEHRDRPHRREIVLHIGS

Sequences:

>Translated_140_residues
MAQTVITMSTTGQGLYEFTAEAGEFVRATGVAEGLLTVFVRHTSASLIIQENADPDVKRDLGAFFHRLVPPSSDPSMDWI
VHRMEGPDDMPAHIKSALTQVSLGVPIMKGRLALGTWQGLYLFEHRDRPHRREIVLHIGS
>Mature_139_residues
AQTVITMSTTGQGLYEFTAEAGEFVRATGVAEGLLTVFVRHTSASLIIQENADPDVKRDLGAFFHRLVPPSSDPSMDWIV
HRMEGPDDMPAHIKSALTQVSLGVPIMKGRLALGTWQGLYLFEHRDRPHRREIVLHIGS

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=134, Percent_Identity=41.044776119403, Blast_Score=102, Evalue=1e-23,
Organism=Drosophila melanogaster, GI221476589, Length=103, Percent_Identity=44.6601941747573, Blast_Score=96, Evalue=7e-21,
Organism=Drosophila melanogaster, GI221476594, Length=103, Percent_Identity=44.6601941747573, Blast_Score=96, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15507; Mature: 15376

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTVITMSTTGQGLYEFTAEAGEFVRATGVAEGLLTVFVRHTSASLIIQENADPDVKRD
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH
LGAFFHRLVPPSSDPSMDWIVHRMEGPDDMPAHIKSALTQVSLGVPIMKGRLALGTWQGL
HHHHHHHHCCCCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHCCCCEECCEEEEECCCCE
YLFEHRDRPHRREIVLHIGS
EEEECCCCCCCEEEEEEECC
>Mature Secondary Structure 
AQTVITMSTTGQGLYEFTAEAGEFVRATGVAEGLLTVFVRHTSASLIIQENADPDVKRD
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH
LGAFFHRLVPPSSDPSMDWIVHRMEGPDDMPAHIKSALTQVSLGVPIMKGRLALGTWQGL
HHHHHHHHCCCCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHCCCCEECCEEEEECCCCE
YLFEHRDRPHRREIVLHIGS
EEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]