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The map label for this gene is bioC [C]

Identifier: 150397204

GI number: 150397204

Start: 2054300

End: 2055034

Strand: Direct

Name: bioC [C]

Synonym: Smed_2003

Alternate gene names: 150397204

Gene position: 2054300-2055034 (Clockwise)

Preceding gene: 150397200

Following gene: 150397207

Centisome position: 54.32

GC content: 61.63

Gene sequence:

>735_bases
ATGGCACAGAATATTTACGACAAACCCGAATTCTTCGCCGGCTACAGCCAACTGGGCCGGTCCCTGCATGGGCTGGACGG
TGCCCCGGAATGGCCGGCGATCCGCGCGATGCTGCCGAAATTCGACGGCCTGCGCGTCGTCGATCTCGGCTGCGGCTTCG
GCTGGTTCGCGCGATGGGCGCGGGAGAACGGAGCCTCTAGTGTTCTCGGTATTGATTTGTCCGAGAAGATGATCGCACGG
GCGCGCAATGAGACGAGTGATCCGGCCATCGAATACCGGATTGCCAATCTTGAGGAGCTGGTTCTTCCCGAAGCGCGTTT
CGACTTCGCCTATAGTTCGCTTGCCTTCCACTACATCGAAGACTTCGACCGCCTGCTGCGCACGATCCACGCCAGCCTGT
TGCCCGGGTCCAATTTCGTCTTCACCATCGAGCATCCCATCTACATGGCTCCGACCAACCCAGGCTGGACGGTCGATTCG
GAGGGGCGCCGTATCTGGCCGCTCGATCGCTACGCAGTCGAAGGAACACGGCTTACCGACTGGCTCGCCAGGGGCGTCGT
CAAGTATCACCGAATGTTCGGCACGACGTTGAACAGTCTGCTTGCGGCCGGCTTCGTGATCCGCCGCGTTCAGGAGTGGA
GCCCCACCGCCGAGGAGATCGCCCGAATTCCCGACCTGGCGGAAGAGGTCGACCGGCCGATGATGCTGCTCCTTGCCGCG
CAGAGAGAGGCTTAG

Upstream 100 bases:

>100_bases
AGGATTTGGGTCAAGCTAGCTGACCTAATTCTAACCGCCACCCGAATCTTGTCACGGTGACAAGCGGACACGGATTGTTT
CCGGCAGCACGAAATGGAAA

Downstream 100 bases:

>100_bases
ACGCCGGATCTGCGGACGGGAGCGCCTATTTCCGCTTCTGCGCTTTCCCCTTTTTGACGGGTTCGGCGACCGGATTTGCT
GCTTCCTCGGCCTCTTTCTC

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MAQNIYDKPEFFAGYSQLGRSLHGLDGAPEWPAIRAMLPKFDGLRVVDLGCGFGWFARWARENGASSVLGIDLSEKMIAR
ARNETSDPAIEYRIANLEELVLPEARFDFAYSSLAFHYIEDFDRLLRTIHASLLPGSNFVFTIEHPIYMAPTNPGWTVDS
EGRRIWPLDRYAVEGTRLTDWLARGVVKYHRMFGTTLNSLLAAGFVIRRVQEWSPTAEEIARIPDLAEEVDRPMMLLLAA
QREA

Sequences:

>Translated_244_residues
MAQNIYDKPEFFAGYSQLGRSLHGLDGAPEWPAIRAMLPKFDGLRVVDLGCGFGWFARWARENGASSVLGIDLSEKMIAR
ARNETSDPAIEYRIANLEELVLPEARFDFAYSSLAFHYIEDFDRLLRTIHASLLPGSNFVFTIEHPIYMAPTNPGWTVDS
EGRRIWPLDRYAVEGTRLTDWLARGVVKYHRMFGTTLNSLLAAGFVIRRVQEWSPTAEEIARIPDLAEEVDRPMMLLLAA
QREA
>Mature_243_residues
AQNIYDKPEFFAGYSQLGRSLHGLDGAPEWPAIRAMLPKFDGLRVVDLGCGFGWFARWARENGASSVLGIDLSEKMIARA
RNETSDPAIEYRIANLEELVLPEARFDFAYSSLAFHYIEDFDRLLRTIHASLLPGSNFVFTIEHPIYMAPTNPGWTVDSE
GRRIWPLDRYAVEGTRLTDWLARGVVKYHRMFGTTLNSLLAAGFVIRRVQEWSPTAEEIARIPDLAEEVDRPMMLLLAAQ
REA

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786994, Length=110, Percent_Identity=37.2727272727273, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27680; Mature: 27549

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNIYDKPEFFAGYSQLGRSLHGLDGAPEWPAIRAMLPKFDGLRVVDLGCGFGWFARWA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEECCCHHHHHHHH
RENGASSVLGIDLSEKMIARARNETSDPAIEYRIANLEELVLPEARFDFAYSSLAFHYIE
HHCCCCCEEECCHHHHHHHHHCCCCCCCHHEEECCCHHHHHCCCHHHHHHHHHHHHHHHH
DFDRLLRTIHASLLPGSNFVFTIEHPIYMAPTNPGWTVDSEGRRIWPLDRYAVEGTRLTD
HHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCCCCCCCCCEECCHHHHHCCCCHHHH
WLARGVVKYHRMFGTTLNSLLAAGFVIRRVQEWSPTAEEIARIPDLAEEVDRPMMLLLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHCCHHEEHHHH
QREA
HCCC
>Mature Secondary Structure 
AQNIYDKPEFFAGYSQLGRSLHGLDGAPEWPAIRAMLPKFDGLRVVDLGCGFGWFARWA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEECCCHHHHHHHH
RENGASSVLGIDLSEKMIARARNETSDPAIEYRIANLEELVLPEARFDFAYSSLAFHYIE
HHCCCCCEEECCHHHHHHHHHCCCCCCCHHEEECCCHHHHHCCCHHHHHHHHHHHHHHHH
DFDRLLRTIHASLLPGSNFVFTIEHPIYMAPTNPGWTVDSEGRRIWPLDRYAVEGTRLTD
HHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCCCCCCCCCEECCHHHHHCCCCHHHH
WLARGVVKYHRMFGTTLNSLLAAGFVIRRVQEWSPTAEEIARIPDLAEEVDRPMMLLLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHCCHHEEHHHH
QREA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]