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The map label for this gene is 150397200

Identifier: 150397200

GI number: 150397200

Start: 2050857

End: 2051666

Strand: Direct

Name: 150397200

Synonym: Smed_1998

Alternate gene names: NA

Gene position: 2050857-2051666 (Clockwise)

Preceding gene: 150397199

Following gene: 150397204

Centisome position: 54.23

GC content: 63.46

Gene sequence:

>810_bases
ATGACCGACGAATTCGAAACCGTCTCCGACGCCGAACTGCACGCCTTTGTGGATGACCTTTTGAGCCAATCGGAACGCGC
GCGTGTCGAATCCTGGCTGGAGAAGCATCCGGAAAAAGCCGACGAGGTGCACCGATGGCAGGCCCAGGCAGCGGCATTGA
AGCAGTATTTCGCCCCTTACGCCCGCAGTGACGAAAATGATCGTGCGCTGATATCGGCTCGCCGGACAGCCGAACGTACC
GGTTCTCGCTCGTCGGCGTTCAGGCTGCGGCGCCTTGCCGCCGTGTTTCTGATTTTCGCCGCTGGCGCGGCCGCTGGCGT
TTACGCGTCCGATCTTTTCGCCCCTGACTCCCGATTGGCCGCCGCAGCCTCCGAGGCACTCCCCCGGCAGGCGGAATCGG
CATTCCTGATCTATACCAGCGAAGTCCGCCACCCCGTGGAGGTCGGCGCCGGTGAGCGGGATCACCTCGCCACATGGCTC
GGCAAGCGGCTCGACTACGCCCTAAGAATCCCCGATCTGTCCCCGCTCGGCTTTTCGCTCGTCGGCGGGCGGCTCATTCC
CGTCAATGGCAAGGCAGGCGCGATGCTGATGTATGAAGACGGGACCGGCGGGCGGCTGACGGTGCTTCTCGGCCGGAACA
CCGAGAACCGCGAAACGAGCTTCCGGATCGCCAGCCGTGGCGATGTCGAGACCTTTTACTGGATCGACGGCGAGATCGGT
TATGCCGTCACGGGCGAAGTGCCGCGCGACCTGCTGCAGAAGGTTGCCGACGAATGCTATCGTCAGTTCGAGAACTCGGA
GCGCTCCTGA

Upstream 100 bases:

>100_bases
AAATCCCGATCGGGACCGTGATGTCCCGCCTCTCGCGAGCCCGCCGCCAGCTCGCCGAAGCGATGAAGGACGATAATGTG
ATCGCCCTGCGGAGACCGAA

Downstream 100 bases:

>100_bases
CGCGTTCAATAGTCCGGTTCAACGTAGAGGATCGCTATCGAGGACGATTGGTTTTCCGTGCGGCGTCGCTTCCGCAGCGC
GCTTCCAGCTTTTGACCAGC

Product: putative transmembrane anti-sigma factor

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Anti-Sigma Factor; Transmembrane Regulator; Transmembrane Protein; PrtR Transmembrane Transcriptional Regulator; Transcriptional Regulator; Sigma Factor Regulator PrtR; Transmembrane Regulator PrtR; Transmembrane Transcription Regulator

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTDEFETVSDAELHAFVDDLLSQSERARVESWLEKHPEKADEVHRWQAQAAALKQYFAPYARSDENDRALISARRTAERT
GSRSSAFRLRRLAAVFLIFAAGAAAGVYASDLFAPDSRLAAAASEALPRQAESAFLIYTSEVRHPVEVGAGERDHLATWL
GKRLDYALRIPDLSPLGFSLVGGRLIPVNGKAGAMLMYEDGTGGRLTVLLGRNTENRETSFRIASRGDVETFYWIDGEIG
YAVTGEVPRDLLQKVADECYRQFENSERS

Sequences:

>Translated_269_residues
MTDEFETVSDAELHAFVDDLLSQSERARVESWLEKHPEKADEVHRWQAQAAALKQYFAPYARSDENDRALISARRTAERT
GSRSSAFRLRRLAAVFLIFAAGAAAGVYASDLFAPDSRLAAAASEALPRQAESAFLIYTSEVRHPVEVGAGERDHLATWL
GKRLDYALRIPDLSPLGFSLVGGRLIPVNGKAGAMLMYEDGTGGRLTVLLGRNTENRETSFRIASRGDVETFYWIDGEIG
YAVTGEVPRDLLQKVADECYRQFENSERS
>Mature_268_residues
TDEFETVSDAELHAFVDDLLSQSERARVESWLEKHPEKADEVHRWQAQAAALKQYFAPYARSDENDRALISARRTAERTG
SRSSAFRLRRLAAVFLIFAAGAAAGVYASDLFAPDSRLAAAASEALPRQAESAFLIYTSEVRHPVEVGAGERDHLATWLG
KRLDYALRIPDLSPLGFSLVGGRLIPVNGKAGAMLMYEDGTGGRLTVLLGRNTENRETSFRIASRGDVETFYWIDGEIGY
AVTGEVPRDLLQKVADECYRQFENSERS

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29850; Mature: 29718

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEFETVSDAELHAFVDDLLSQSERARVESWLEKHPEKADEVHRWQAQAAALKQYFAPY
CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHH
ARSDENDRALISARRTAERTGSRSSAFRLRRLAAVFLIFAAGAAAGVYASDLFAPDSRLA
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AAASEALPRQAESAFLIYTSEVRHPVEVGAGERDHLATWLGKRLDYALRIPDLSPLGFSL
HHHHHHCCCCCCCEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHCEEEECCCCCCCCHHH
VGGRLIPVNGKAGAMLMYEDGTGGRLTVLLGRNTENRETSFRIASRGDVETFYWIDGEIG
HCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEECCCCC
YAVTGEVPRDLLQKVADECYRQFENSERS
EEEECHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TDEFETVSDAELHAFVDDLLSQSERARVESWLEKHPEKADEVHRWQAQAAALKQYFAPY
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHH
ARSDENDRALISARRTAERTGSRSSAFRLRRLAAVFLIFAAGAAAGVYASDLFAPDSRLA
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AAASEALPRQAESAFLIYTSEVRHPVEVGAGERDHLATWLGKRLDYALRIPDLSPLGFSL
HHHHHHCCCCCCCEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHCEEEECCCCCCCCHHH
VGGRLIPVNGKAGAMLMYEDGTGGRLTVLLGRNTENRETSFRIASRGDVETFYWIDGEIG
HCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEECCCCC
YAVTGEVPRDLLQKVADECYRQFENSERS
EEEECHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA