| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is cyaB [H]
Identifier: 150396966
GI number: 150396966
Start: 1845410
End: 1847587
Strand: Reverse
Name: cyaB [H]
Synonym: Smed_1763
Alternate gene names: 150396966
Gene position: 1847587-1845410 (Counterclockwise)
Preceding gene: 150396967
Following gene: 150396964
Centisome position: 48.85
GC content: 62.35
Gene sequence:
>2178_bases ATGACACGCACGCAGCTATTTGGGGTCATCGTCGGCCTTGTGATCGTGGCGGCGCTTACGACCCTGCGTGCAAGCGACCC ACCACTTCTGCGGCTCGCCCGCGACCTCACCTTCGATGAATATCAACGCCTGGCGCCGCGCAGCTTCGAGAACGTTCCCG TTCGCGTCGTCGACATCGACGAGGCATCGCTCTCAGAGTTCGGCCAGTGGCCGTGGCCGCGCGATCGCATTGCGGCCTTG GTGGACAGGCTCTCGGAACTGGGTGCGGCGGTCATTGCCTTTGACATCCTGTTCTCCGAACCCGACCGTCTGTCGCCACG CAGCGTCATGCGCGATGTCGCCGGCGTCGATCCCGATCTCCTCGGGCTACTGCCGGACAATGACGAGATATTTGCCCGGT CCATCGCCGACCGGCCCGTCGTCCTCGGCTTCGGCCTTTCAAATGCAGGAGACTACCGGCCACCGGTGAAAGCCGGTTTC GCCTTCACCGGTGAAAGCCCGTTCGATGCCCCGCCGCGACTGACGGCCGCGACGCCTTTGAGGTCGCAACTCGAAACCAG TGCTGCCGGATTAGGACATATCAGTCTCAATCCCGGGAGCCGGTCCGCGGTCGTGCGCGCCGTCCCGCTGCTGTTGAGTG ATGGCGGCCAGCTCTATCCGAACCTGGCGATTGAAGCGCTCCGCGTTGCCCAAGGGGTCTCCACATACGTTATTGCCGGT GCTCCGGACATACCCGACACAATCACACTGATAAAGGTTGGGGCGTTCGTCGTGCCGGTCACGGCAACCGGTGAGCTCTG GCTTTATGTCAGTCCCGACCGTGCTGAAAGATATGTCTCGGCCGGCCAGGTGCTGGCGCCCGCCGGCGCCTCCTCTGAAA CGCGGGCGGCCATCGAAGGCAGCATTGTCTTTGTGGGCACGTCGGCAGCGGGCCTTCAGGATATTCGGACCACCGCGCTT GGGCACAACGTGCCCGGCGTGTCGCTGCACGCGCAGACCGTCGAACAGGTTCTGTCCGGCCGGTTTCTCTCACGGCCGGA TTGGGCAGACGGGCTGGAGATACTCGCCATTGCCGTGGCCGGAATTCTGCTCGTCCTGCTGACCACCTTCGTCAGCCCAG CCGTCGCGCTTGGATGCGGCCTCATGATAACGGCGCTGGCCCTCGTGGCCTCCTGGTCCGCCTTTCTCTATGGGGGCTTG TTACTCGACCCCCTGGCGCCCATTCTCGCCGGATCGATCACCCATTTTGCGGCAACGGCCTATCGTTTCCTGGTCATCGA CCGGGAGCGGCGCGTGGTGCGGCGCGCCTTTGGGCAATACTTGTCGCCGTCGCTACTCTATCGAATCGAGCATACGCAAG ACGCCCTGCGTCTTGGCGGTGACGATCGGGAATTGACCATCATGTTCGTCGACGTGCGCAATTTTACGGAGATGAGCGAG CGCCTCACGCCGGGAGAGGTGGTCCGGTTCCTCAATACGCTTCTCGATGCGTTGAGCCGCCACGTGATCGCGAACGAGGG CACGCTGGACAAGTTTATCGGCGATTCGATCATGGCATTCTGGAACGCGCCTGTTGACGTCGCCGATCACACGGGCAAAG CCGTCCGCGCCGCCCTGGCCATGCGCGAAACGCTCGCTCGTCTGAATGAGAGCGATGCGTTCGGTTTCGGCAGCAAGCAA ACGGTGGCCATCGGCGTGGGCATTCATACCGGGGTTGCCTGCGTCGGCAACATGGGAGCGGAGATGCACTTCAACTATTC CGCGGTTGGTGACGCGGTCAATGTCGCTGCTCGGATCGAGGCCGCCTGCAAGGATGTAGGCTTCGACATTCTGATATCCG ATACGGCGGCAAAAGCGGCCGGCAGATGCGCCTTGCTCGAGGCAGGGTCGCTGGGGTTGAAAGGCAAGAGCACGCGAACA CAGGTCTTTGCCGTCGTGGGTGACGAGCGGGTGGCCGCATCGCCCGAGTTTTCAGAGCTGCAGCACCTTCATGAGCAGTT GATCGGATCTCTGCGATTGAGATTTCGTCCGCGTCGCGAAATCGTGAATGCGGCGAAGCTAAAGGCGTCGGCTCTATGTG GTGGATTGTCGGATTTCTACCGCCGGATCACGCGCCGGGCGGAACATTTCGCAGGTGAACAAATGGCCGTCGAGAACGAG GGCAGGTCGGCTGAATAG
Upstream 100 bases:
>100_bases TTCTCCGTTGCATACGCCCTGCGAAAAATGCAGCATGGCTTCGGGGCAGGACGGTTTTTTCGCCGCTATGGCGACGGCGT CCGGCGCGAAGGGCGCTGCC
Downstream 100 bases:
>100_bases CCCGCATGAGGAGGGGTCTCCTCCCGTTCAGCCGCGGCCCTTCTTCGTACCGGTATCCAGTTGGCCTTTCTTGCCGGTGT CCTGCCCCTTTTTCCCCGAA
Product: putative Chase2 sensor protein
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 2; Adenylyl cyclase 2; AC2 [H]
Number of amino acids: Translated: 725; Mature: 724
Protein sequence:
>725_residues MTRTQLFGVIVGLVIVAALTTLRASDPPLLRLARDLTFDEYQRLAPRSFENVPVRVVDIDEASLSEFGQWPWPRDRIAAL VDRLSELGAAVIAFDILFSEPDRLSPRSVMRDVAGVDPDLLGLLPDNDEIFARSIADRPVVLGFGLSNAGDYRPPVKAGF AFTGESPFDAPPRLTAATPLRSQLETSAAGLGHISLNPGSRSAVVRAVPLLLSDGGQLYPNLAIEALRVAQGVSTYVIAG APDIPDTITLIKVGAFVVPVTATGELWLYVSPDRAERYVSAGQVLAPAGASSETRAAIEGSIVFVGTSAAGLQDIRTTAL GHNVPGVSLHAQTVEQVLSGRFLSRPDWADGLEILAIAVAGILLVLLTTFVSPAVALGCGLMITALALVASWSAFLYGGL LLDPLAPILAGSITHFAATAYRFLVIDRERRVVRRAFGQYLSPSLLYRIEHTQDALRLGGDDRELTIMFVDVRNFTEMSE RLTPGEVVRFLNTLLDALSRHVIANEGTLDKFIGDSIMAFWNAPVDVADHTGKAVRAALAMRETLARLNESDAFGFGSKQ TVAIGVGIHTGVACVGNMGAEMHFNYSAVGDAVNVAARIEAACKDVGFDILISDTAAKAAGRCALLEAGSLGLKGKSTRT QVFAVVGDERVAASPEFSELQHLHEQLIGSLRLRFRPRREIVNAAKLKASALCGGLSDFYRRITRRAEHFAGEQMAVENE GRSAE
Sequences:
>Translated_725_residues MTRTQLFGVIVGLVIVAALTTLRASDPPLLRLARDLTFDEYQRLAPRSFENVPVRVVDIDEASLSEFGQWPWPRDRIAAL VDRLSELGAAVIAFDILFSEPDRLSPRSVMRDVAGVDPDLLGLLPDNDEIFARSIADRPVVLGFGLSNAGDYRPPVKAGF AFTGESPFDAPPRLTAATPLRSQLETSAAGLGHISLNPGSRSAVVRAVPLLLSDGGQLYPNLAIEALRVAQGVSTYVIAG APDIPDTITLIKVGAFVVPVTATGELWLYVSPDRAERYVSAGQVLAPAGASSETRAAIEGSIVFVGTSAAGLQDIRTTAL GHNVPGVSLHAQTVEQVLSGRFLSRPDWADGLEILAIAVAGILLVLLTTFVSPAVALGCGLMITALALVASWSAFLYGGL LLDPLAPILAGSITHFAATAYRFLVIDRERRVVRRAFGQYLSPSLLYRIEHTQDALRLGGDDRELTIMFVDVRNFTEMSE RLTPGEVVRFLNTLLDALSRHVIANEGTLDKFIGDSIMAFWNAPVDVADHTGKAVRAALAMRETLARLNESDAFGFGSKQ TVAIGVGIHTGVACVGNMGAEMHFNYSAVGDAVNVAARIEAACKDVGFDILISDTAAKAAGRCALLEAGSLGLKGKSTRT QVFAVVGDERVAASPEFSELQHLHEQLIGSLRLRFRPRREIVNAAKLKASALCGGLSDFYRRITRRAEHFAGEQMAVENE GRSAE >Mature_724_residues TRTQLFGVIVGLVIVAALTTLRASDPPLLRLARDLTFDEYQRLAPRSFENVPVRVVDIDEASLSEFGQWPWPRDRIAALV DRLSELGAAVIAFDILFSEPDRLSPRSVMRDVAGVDPDLLGLLPDNDEIFARSIADRPVVLGFGLSNAGDYRPPVKAGFA FTGESPFDAPPRLTAATPLRSQLETSAAGLGHISLNPGSRSAVVRAVPLLLSDGGQLYPNLAIEALRVAQGVSTYVIAGA PDIPDTITLIKVGAFVVPVTATGELWLYVSPDRAERYVSAGQVLAPAGASSETRAAIEGSIVFVGTSAAGLQDIRTTALG HNVPGVSLHAQTVEQVLSGRFLSRPDWADGLEILAIAVAGILLVLLTTFVSPAVALGCGLMITALALVASWSAFLYGGLL LDPLAPILAGSITHFAATAYRFLVIDRERRVVRRAFGQYLSPSLLYRIEHTQDALRLGGDDRELTIMFVDVRNFTEMSER LTPGEVVRFLNTLLDALSRHVIANEGTLDKFIGDSIMAFWNAPVDVADHTGKAVRAALAMRETLARLNESDAFGFGSKQT VAIGVGIHTGVACVGNMGAEMHFNYSAVGDAVNVAARIEAACKDVGFDILISDTAAKAAGRCALLEAGSLGLKGKSTRTQ VFAVVGDERVAASPEFSELQHLHEQLIGSLRLRFRPRREIVNAAKLKASALCGGLSDFYRRITRRAEHFAGEQMAVENEG RSAE
Specific function: Unknown
COG id: COG4252
COG function: function code T; Predicted transmembrane sensor domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Drosophila melanogaster, GI62484477, Length=204, Percent_Identity=29.4117647058824, Blast_Score=81, Evalue=3e-15, Organism=Drosophila melanogaster, GI62484298, Length=204, Percent_Identity=29.4117647058824, Blast_Score=81, Evalue=3e-15, Organism=Drosophila melanogaster, GI116008008, Length=204, Percent_Identity=30.3921568627451, Blast_Score=80, Evalue=6e-15, Organism=Drosophila melanogaster, GI85725044, Length=371, Percent_Identity=24.5283018867925, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00072 Response_reg [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 77568; Mature: 77437
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTQLFGVIVGLVIVAALTTLRASDPPLLRLARDLTFDEYQRLAPRSFENVPVRVVDID CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECC EASLSEFGQWPWPRDRIAALVDRLSELGAAVIAFDILFSEPDRLSPRSVMRDVAGVDPDL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH LGLLPDNDEIFARSIADRPVVLGFGLSNAGDYRPPVKAGFAFTGESPFDAPPRLTAATPL EEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCH RSQLETSAAGLGHISLNPGSRSAVVRAVPLLLSDGGQLYPNLAIEALRVAQGVSTYVIAG HHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEC APDIPDTITLIKVGAFVVPVTATGELWLYVSPDRAERYVSAGQVLAPAGASSETRAAIEG CCCCCCHHHHEEECCEEEEEEECCCEEEEECCHHHHHHHHCCCEEECCCCCCCCCCEECC SIVFVGTSAAGLQDIRTTALGHNVPGVSLHAQTVEQVLSGRFLSRPDWADGLEILAIAVA CEEEEECCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH GILLVLLTTFVSPAVALGCGLMITALALVASWSAFLYGGLLLDPLAPILAGSITHFAATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH YRFLVIDRERRVVRRAFGQYLSPSLLYRIEHTQDALRLGGDDRELTIMFVDVRNFTEMSE HHEEEEEHHHHHHHHHHHHHCCHHHEEEEHHHHHHHHCCCCCCEEEEEEEECCCHHHHHH RLTPGEVVRFLNTLLDALSRHVIANEGTLDKFIGDSIMAFWNAPVDVADHTGKAVRAALA CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH MRETLARLNESDAFGFGSKQTVAIGVGIHTGVACVGNMGAEMHFNYSAVGDAVNVAARIE HHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHH AACKDVGFDILISDTAAKAAGRCALLEAGSLGLKGKSTRTQVFAVVGDERVAASPEFSEL HHHHHCCCEEEEECHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHH QHLHEQLIGSLRLRFRPRREIVNAAKLKASALCGGLSDFYRRITRRAEHFAGEQMAVENE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCC GRSAE CCCCC >Mature Secondary Structure TRTQLFGVIVGLVIVAALTTLRASDPPLLRLARDLTFDEYQRLAPRSFENVPVRVVDID CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECC EASLSEFGQWPWPRDRIAALVDRLSELGAAVIAFDILFSEPDRLSPRSVMRDVAGVDPDL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH LGLLPDNDEIFARSIADRPVVLGFGLSNAGDYRPPVKAGFAFTGESPFDAPPRLTAATPL EEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCH RSQLETSAAGLGHISLNPGSRSAVVRAVPLLLSDGGQLYPNLAIEALRVAQGVSTYVIAG HHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEC APDIPDTITLIKVGAFVVPVTATGELWLYVSPDRAERYVSAGQVLAPAGASSETRAAIEG CCCCCCHHHHEEECCEEEEEEECCCEEEEECCHHHHHHHHCCCEEECCCCCCCCCCEECC SIVFVGTSAAGLQDIRTTALGHNVPGVSLHAQTVEQVLSGRFLSRPDWADGLEILAIAVA CEEEEECCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH GILLVLLTTFVSPAVALGCGLMITALALVASWSAFLYGGLLLDPLAPILAGSITHFAATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH YRFLVIDRERRVVRRAFGQYLSPSLLYRIEHTQDALRLGGDDRELTIMFVDVRNFTEMSE HHEEEEEHHHHHHHHHHHHHCCHHHEEEEHHHHHHHHCCCCCCEEEEEEEECCCHHHHHH RLTPGEVVRFLNTLLDALSRHVIANEGTLDKFIGDSIMAFWNAPVDVADHTGKAVRAALA CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH MRETLARLNESDAFGFGSKQTVAIGVGIHTGVACVGNMGAEMHFNYSAVGDAVNVAARIE HHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHH AACKDVGFDILISDTAAKAAGRCALLEAGSLGLKGKSTRTQVFAVVGDERVAASPEFSEL HHHHHCCCEEEEECHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHH QHLHEQLIGSLRLRFRPRREIVNAAKLKASALCGGLSDFYRRITRRAEHFAGEQMAVENE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCC GRSAE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]