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The map label for this gene is 150396926

Identifier: 150396926

GI number: 150396926

Start: 1802441

End: 1803202

Strand: Reverse

Name: 150396926

Synonym: Smed_1723

Alternate gene names: NA

Gene position: 1803202-1802441 (Counterclockwise)

Preceding gene: 150396927

Following gene: 150396925

Centisome position: 47.68

GC content: 62.47

Gene sequence:

>762_bases
ATGAAAGATGTCAGCTTCCAGCTTTACAGCGCCCGAAATTTCCCGCCCTTTGCCGAAGTCCTCTCTGCCATCGGTTCTGC
GGGCTACACGCAGGTCGAGGGTTACGGAGCCCTTTACGCGGCACTCTCTGATGCGGAGATCGCCGAGTTCAAGGCCGGAC
TCGACCGCAACGGCCTATCCATGCCGACAGCCCATTTCGGCTTGGACATGCTGGAGGGCAATCCGTCCCGCGTTCTGCAG
ATCGCCGAGTCGCTCGGCATTCGCGCTATCTATTGCCCCTACCTGATGCCGGATCAGCGCCCGAGCGATGCGACCGGCTG
GCGGGCCTTCGGGGGCCGTCTGCAGGCGGCCGGTAAGCCGTTCCGCGATGCCGGCCTCGATTTCGGTTGGCACAATCACG
ACTTCGAGTTTCACGCGCTCGCCGACGGCTCGGTGCCGCTCGACCAGATCTTGGCAGGCGGTCCCGACCTTTCCTGGGAA
GCCGATATCGCCTGGATCGTGCGCGGCGGAGCGGATCCATTCGCCTGGATCTCGAAATATGGCCCCCGCATCACGGCGGT
CCACGTCAAGGATATCGCGCCTAAGGGCGAGAAGGCGGACGAGGACGGTTGGGCCGATGTCGGGGAGGGGACGCTCGACT
GGAAGGCACTGATACAGGCGCTTTCCAGGACGTCGGCGAAATATTTCATCGCCGAACACGACAATCCCAGCGATTTCCGG
CGTTTCGCCAAGCGCTCGCTGGCCTCTATTCAATCCTACTGA

Upstream 100 bases:

>100_bases
AGCCCGCGCTTCAGCGCCTACGATCTCGAAACCTGCCAGGGAAAAGGGTGAAGGCACACTCCCACTCCCAGGCGACCGTT
CCAACCACCAGGAGAGTTCG

Downstream 100 bases:

>100_bases
TCGACGGATAGGCCCATGACAAAAGAACTTGGCGTCGGCATCATCGGATGCGGCAATATTTCAACGACCTATTTCAAACT
CGCTCCACTGTTCAAGGGTA

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein; Sugar Phosphate Isomerase/Epimerase; Twin-Arginine Translocation Pathway Signal; Xylose Isomerase-Like Protein; Xylose Isomerase Family Protein; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase Domain Protein; AP Endonuclease Family 2 Superfamily; Sugar Phosphate Isomerase / Epimerase; Sugar Phosphate Isomerases/Epimerases; Xlose Isomerase Domain-Containing Protein; Xylose Isomerase Domain-Containing Protein Tim Barrel

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKDVSFQLYSARNFPPFAEVLSAIGSAGYTQVEGYGALYAALSDAEIAEFKAGLDRNGLSMPTAHFGLDMLEGNPSRVLQ
IAESLGIRAIYCPYLMPDQRPSDATGWRAFGGRLQAAGKPFRDAGLDFGWHNHDFEFHALADGSVPLDQILAGGPDLSWE
ADIAWIVRGGADPFAWISKYGPRITAVHVKDIAPKGEKADEDGWADVGEGTLDWKALIQALSRTSAKYFIAEHDNPSDFR
RFAKRSLASIQSY

Sequences:

>Translated_253_residues
MKDVSFQLYSARNFPPFAEVLSAIGSAGYTQVEGYGALYAALSDAEIAEFKAGLDRNGLSMPTAHFGLDMLEGNPSRVLQ
IAESLGIRAIYCPYLMPDQRPSDATGWRAFGGRLQAAGKPFRDAGLDFGWHNHDFEFHALADGSVPLDQILAGGPDLSWE
ADIAWIVRGGADPFAWISKYGPRITAVHVKDIAPKGEKADEDGWADVGEGTLDWKALIQALSRTSAKYFIAEHDNPSDFR
RFAKRSLASIQSY
>Mature_253_residues
MKDVSFQLYSARNFPPFAEVLSAIGSAGYTQVEGYGALYAALSDAEIAEFKAGLDRNGLSMPTAHFGLDMLEGNPSRVLQ
IAESLGIRAIYCPYLMPDQRPSDATGWRAFGGRLQAAGKPFRDAGLDFGWHNHDFEFHALADGSVPLDQILAGGPDLSWE
ADIAWIVRGGADPFAWISKYGPRITAVHVKDIAPKGEKADEDGWADVGEGTLDWKALIQALSRTSAKYFIAEHDNPSDFR
RFAKRSLASIQSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27632; Mature: 27632

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVSFQLYSARNFPPFAEVLSAIGSAGYTQVEGYGALYAALSDAEIAEFKAGLDRNGLS
CCCCEEEEECCCCCCCHHHHHHHHCCCCCEEECCCHHEEEHHCCCHHHHHHHCCCCCCCC
MPTAHFGLDMLEGNPSRVLQIAESLGIRAIYCPYLMPDQRPSDATGWRAFGGRLQAAGKP
CCHHHHCCHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHCCEECCCCCC
FRDAGLDFGWHNHDFEFHALADGSVPLDQILAGGPDLSWEADIAWIVRGGADPFAWISKY
HHHCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHC
GPRITAVHVKDIAPKGEKADEDGWADVGEGTLDWKALIQALSRTSAKYFIAEHDNPSDFR
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHH
RFAKRSLASIQSY
HHHHHHHHHHHCC
>Mature Secondary Structure
MKDVSFQLYSARNFPPFAEVLSAIGSAGYTQVEGYGALYAALSDAEIAEFKAGLDRNGLS
CCCCEEEEECCCCCCCHHHHHHHHCCCCCEEECCCHHEEEHHCCCHHHHHHHCCCCCCCC
MPTAHFGLDMLEGNPSRVLQIAESLGIRAIYCPYLMPDQRPSDATGWRAFGGRLQAAGKP
CCHHHHCCHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHCCEECCCCCC
FRDAGLDFGWHNHDFEFHALADGSVPLDQILAGGPDLSWEADIAWIVRGGADPFAWISKY
HHHCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHC
GPRITAVHVKDIAPKGEKADEDGWADVGEGTLDWKALIQALSRTSAKYFIAEHDNPSDFR
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHH
RFAKRSLASIQSY
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA