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The map label for this gene is 150396912

Identifier: 150396912

GI number: 150396912

Start: 1787374

End: 1787778

Strand: Reverse

Name: 150396912

Synonym: Smed_1709

Alternate gene names: NA

Gene position: 1787778-1787374 (Counterclockwise)

Preceding gene: 150396913

Following gene: 150396910

Centisome position: 47.27

GC content: 59.75

Gene sequence:

>405_bases
ATGAAACGCCTTCTGATCGCGCTCGTCGCCAGCTCATTCCTTGCCGCGCCGATGGCGCTTGCTCAGCCGGCCGGCTCCTA
TGAACTGGCGCAGGCGCATGATCGCTATCGCCACAGGTCAGTCGATCGTCATGTCGAAAAACACATCGAGAAACGCATCG
ACAAACGTGGGAACAGGCATGTCGAGAAGCATGTCGAAAAGCGCGTGATCATCAAGAAGCACCGCTGGGCGCGAGGCCAC
CGCCTGAGCCCGTCCGAGCGGCGCCACATGGCTTATGTCCGCAACTATCGCCATTATAAGCTGCGGCCGCCGCCGCGGGG
TCAGCAATGGGTGCGTGTCGACAATGACTACCTCCTGATCAGCCTTGCAACGGGTGTAATCGTCGGCCTTGCCTCGGCTT
ATTGA

Upstream 100 bases:

>100_bases
ATAAGCATTAGTAATCATTACCTAATTGTAATGTCCGTTTTCATATTCGGTTCAGGAAGGGAGGCCTAGTTTCACCGGGT
AATAACGAAAGGGAAACCCC

Downstream 100 bases:

>100_bases
GCGATACCCCGTCTTCCCCCGATCGTGGCCGATCCGGGGAAGACCCCTCAGGCGCTCACGGGTGACCACGACTATCGGGC
GGTTCAGGAGAAATGGTTGC

Product: putative transmembrane signal peptide protein

Products: NA

Alternate protein names: Integral Membrane Protein-Like Protein

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKRLLIALVASSFLAAPMALAQPAGSYELAQAHDRYRHRSVDRHVEKHIEKRIDKRGNRHVEKHVEKRVIIKKHRWARGH
RLSPSERRHMAYVRNYRHYKLRPPPRGQQWVRVDNDYLLISLATGVIVGLASAY

Sequences:

>Translated_134_residues
MKRLLIALVASSFLAAPMALAQPAGSYELAQAHDRYRHRSVDRHVEKHIEKRIDKRGNRHVEKHVEKRVIIKKHRWARGH
RLSPSERRHMAYVRNYRHYKLRPPPRGQQWVRVDNDYLLISLATGVIVGLASAY
>Mature_134_residues
MKRLLIALVASSFLAAPMALAQPAGSYELAQAHDRYRHRSVDRHVEKHIEKRIDKRGNRHVEKHVEKRVIIKKHRWARGH
RLSPSERRHMAYVRNYRHYKLRPPPRGQQWVRVDNDYLLISLATGVIVGLASAY

Specific function: Unknown

COG id: COG5455

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15730; Mature: 15730

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLIALVASSFLAAPMALAQPAGSYELAQAHDRYRHRSVDRHVEKHIEKRIDKRGNRH
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VEKHVEKRVIIKKHRWARGHRLSPSERRHMAYVRNYRHYKLRPPPRGQQWVRVDNDYLLI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEE
SLATGVIVGLASAY
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKRLLIALVASSFLAAPMALAQPAGSYELAQAHDRYRHRSVDRHVEKHIEKRIDKRGNRH
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VEKHVEKRVIIKKHRWARGHRLSPSERRHMAYVRNYRHYKLRPPPRGQQWVRVDNDYLLI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEE
SLATGVIVGLASAY
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA