Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is dgkA [H]

Identifier: 150396811

GI number: 150396811

Start: 1698534

End: 1699016

Strand: Reverse

Name: dgkA [H]

Synonym: Smed_1602

Alternate gene names: 150396811

Gene position: 1699016-1698534 (Counterclockwise)

Preceding gene: 150396812

Following gene: 150396808

Centisome position: 44.92

GC content: 59.63

Gene sequence:

>483_bases
ATGGTGCCGCCTTGGATTCGCCTTAATCGGAACGTCGAAGCTGTTCGCTTTCTCAACTCGCGAGACGAAATGGACGCCAA
GAACACCAACCCCCGCAAAGGCGCTGCCGGGCCGGTTACCAAGCATACCGGATTTCGGCACCTGTTTGCTGCGGCCAGCT
ACTCCTTCGGCGGTGCCAGGCGTCTGATCGGAGAGGCGGCATTCCGCCACGAACTCATCGCCTTTGCCGTCGCGATGGCC
GCGTTCGCGACCGTCGGCGCGAACCTGTTCCAATATGTCGCCATGGCGATCCTGTTTCTGCTGATGATGGCCTTCGAAGC
GATTAATACCGCGATTGAGGAGATCGTCGATCGCGTCTCGCCGGAGATCTCCGAGATGGGCAGGAACGCCAAGGATCTCG
GCTCCTTCGCCTGCCTCTGCCTCATTCTCGCCAATGCGGGCTATGCCGTTTACGTGATATTTCTCGCCCGGTTGCTAGGC
TGA

Upstream 100 bases:

>100_bases
CTTTGCGCAGGCTGGCGTCAGTAACAAGGTGTAGCATAGGGAGTAGGCCCGAGACGCGTTACCCGTTTGCTGTCGATTGC
CCGGCCTGCATGCTATCCTC

Downstream 100 bases:

>100_bases
TCAGGAAGGGTTTTCCAGCCCAACGCTTTGGACTGGCTGGCAACTGTGTTTGTCAGGTGGTTCGTCGGAAGGTTGTTTTG
TCCCTGATGATGGCGTTTGC

Product: diacylglycerol kinase

Products: NA

Alternate protein names: DAGK; Diglyceride kinase; DGK [H]

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MVPPWIRLNRNVEAVRFLNSRDEMDAKNTNPRKGAAGPVTKHTGFRHLFAAASYSFGGARRLIGEAAFRHELIAFAVAMA
AFATVGANLFQYVAMAILFLLMMAFEAINTAIEEIVDRVSPEISEMGRNAKDLGSFACLCLILANAGYAVYVIFLARLLG

Sequences:

>Translated_160_residues
MVPPWIRLNRNVEAVRFLNSRDEMDAKNTNPRKGAAGPVTKHTGFRHLFAAASYSFGGARRLIGEAAFRHELIAFAVAMA
AFATVGANLFQYVAMAILFLLMMAFEAINTAIEEIVDRVSPEISEMGRNAKDLGSFACLCLILANAGYAVYVIFLARLLG
>Mature_160_residues
MVPPWIRLNRNVEAVRFLNSRDEMDAKNTNPRKGAAGPVTKHTGFRHLFAAASYSFGGARRLIGEAAFRHELIAFAVAMA
AFATVGANLFQYVAMAILFLLMMAFEAINTAIEEIVDRVSPEISEMGRNAKDLGSFACLCLILANAGYAVYVIFLARLLG

Specific function: Recycling of diacylglycerol produced during cyclic beta- 1,2-glucan biosynthesis [H]

COG id: COG0818

COG function: function code M; Diacylglycerol kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial diacylglycerol kinase family [H]

Homologues:

Organism=Escherichia coli, GI1790475, Length=102, Percent_Identity=38.2352941176471, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000829 [H]

Pfam domain/function: PF01219 DAGK_prokar [H]

EC number: =2.7.1.107 [H]

Molecular weight: Translated: 17488; Mature: 17488

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS01069 DAGK_PROKAR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPPWIRLNRNVEAVRFLNSRDEMDAKNTNPRKGAAGPVTKHTGFRHLFAAASYSFGGAR
CCCCCCEECCCHHHHHHHHCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH
RLIGEAAFRHELIAFAVAMAAFATVGANLFQYVAMAILFLLMMAFEAINTAIEEIVDRVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PEISEMGRNAKDLGSFACLCLILANAGYAVYVIFLARLLG
HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MVPPWIRLNRNVEAVRFLNSRDEMDAKNTNPRKGAAGPVTKHTGFRHLFAAASYSFGGAR
CCCCCCEECCCHHHHHHHHCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH
RLIGEAAFRHELIAFAVAMAAFATVGANLFQYVAMAILFLLMMAFEAINTAIEEIVDRVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PEISEMGRNAKDLGSFACLCLILANAGYAVYVIFLARLLG
HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1335301; 11481430 [H]