Click here to switch to the map view.

The map label for this gene is exoI [H]

Identifier: 150396808

GI number: 150396808

Start: 1694872

End: 1695459

Strand: Reverse

Name: exoI [H]

Synonym: Smed_1599

Alternate gene names: 150396808

Gene position: 1695459-1694872 (Counterclockwise)

Preceding gene: 150396811

Following gene: 150396807

Centisome position: 44.83

GC content: 65.14

Gene sequence:

>588_bases
ATGGCGGGTGGTTGGATTTTCCTGCTCGTCCTCGGAATCGGCGCCTACGTAGCCGCGCAACTGCCGGTGCCCGAACGGCC
CGTGACGGGTGAGTTGCGTGGCTCCGCATCGGCGAGCGACGGGGACAGTTTGCGGCTCGATGGGCGTCGCATACGTATCG
AGGGTATCGATGCTCCCGAGATCGGTCAGATGTGCCGACGCGCGGATACCCGATGGGACTGCGGCGCGCAGGCGCGACGG
CGGCTGGCTGCTCTGGTCGCGAGAGCCACGACCGTGTGTCGGCTCCATGGCCAGGATCGCTACGGGCGCGACCTGGGCGT
CTGCACGGTTCGCGAGAACGATCTGGGAAGAGAGATGGTCCTTTCTGGTTACGCCGTCAGCTATGGGCTCTACCATGACG
AGGAGGAGAGGGCGCGAAGCTCAGGGACGGGGCTTTGGGGCGGCGATTTTGTGAGGCCGCAGGAATGGCGCCGGTCGAAC
GGCGGGGTGGATGAGCCCCCGCACCGAACGAGCGACCGGATTGAGACCATTATCCGGTGGCTTCAGGAATATTCGAGTGG
GATCATGGCGAGGATCGGCGGTGACTGA

Upstream 100 bases:

>100_bases
GATCGGCAGTGGCGCGGGTCCGGGCTCTCCCGGAAAGCGCTTCGCCTTCGGCCGATCCGGATTTCCTCGGCGGCGCAAGC
GGCCGTCGGGCAACGGGGGC

Downstream 100 bases:

>100_bases
AGAGCACCTGCAGGCGTTGCGGGAGGCGATTTCGCTCTGTCGCCGCTGTCGCGATGACCCGGCGCGTGGCATGGATCACC
GGTTGCCGCACGAGCCGAGG

Product: nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MAGGWIFLLVLGIGAYVAAQLPVPERPVTGELRGSASASDGDSLRLDGRRIRIEGIDAPEIGQMCRRADTRWDCGAQARR
RLAALVARATTVCRLHGQDRYGRDLGVCTVRENDLGREMVLSGYAVSYGLYHDEEERARSSGTGLWGGDFVRPQEWRRSN
GGVDEPPHRTSDRIETIIRWLQEYSSGIMARIGGD

Sequences:

>Translated_195_residues
MAGGWIFLLVLGIGAYVAAQLPVPERPVTGELRGSASASDGDSLRLDGRRIRIEGIDAPEIGQMCRRADTRWDCGAQARR
RLAALVARATTVCRLHGQDRYGRDLGVCTVRENDLGREMVLSGYAVSYGLYHDEEERARSSGTGLWGGDFVRPQEWRRSN
GGVDEPPHRTSDRIETIIRWLQEYSSGIMARIGGD
>Mature_194_residues
AGGWIFLLVLGIGAYVAAQLPVPERPVTGELRGSASASDGDSLRLDGRRIRIEGIDAPEIGQMCRRADTRWDCGAQARRR
LAALVARATTVCRLHGQDRYGRDLGVCTVRENDLGREMVLSGYAVSYGLYHDEEERARSSGTGLWGGDFVRPQEWRRSNG
GVDEPPHRTSDRIETIIRWLQEYSSGIMARIGGD

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: NA

Molecular weight: Translated: 21546; Mature: 21414

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGWIFLLVLGIGAYVAAQLPVPERPVTGELRGSASASDGDSLRLDGRRIRIEGIDAPE
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCHH
IGQMCRRADTRWDCGAQARRRLAALVARATTVCRLHGQDRYGRDLGVCTVRENDLGREMV
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHH
LSGYAVSYGLYHDEEERARSSGTGLWGGDFVRPQEWRRSNGGVDEPPHRTSDRIETIIRW
HHCHHHEECCCCCHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHH
LQEYSSGIMARIGGD
HHHHCCCEEEEECCC
>Mature Secondary Structure 
AGGWIFLLVLGIGAYVAAQLPVPERPVTGELRGSASASDGDSLRLDGRRIRIEGIDAPE
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCHH
IGQMCRRADTRWDCGAQARRRLAALVARATTVCRLHGQDRYGRDLGVCTVRENDLGREMV
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHH
LSGYAVSYGLYHDEEERARSSGTGLWGGDFVRPQEWRRSNGGVDEPPHRTSDRIETIIRW
HHCHHHEECCCCCHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHH
LQEYSSGIMARIGGD
HHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8118055; 11481431 [H]