| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is divK [H]
Identifier: 150395654
GI number: 150395654
Start: 463541
End: 465280
Strand: Direct
Name: divK [H]
Synonym: Smed_0429
Alternate gene names: 150395654
Gene position: 463541-465280 (Clockwise)
Preceding gene: 150395651
Following gene: 150395655
Centisome position: 12.26
GC content: 62.87
Gene sequence:
>1740_bases ATGGGTGATGTGGCGTCGGACGGCGCAGACATCAGCAGGAACATTCTGGAGGCAAGCGGCGAAGCGCTTGGCGCCGCCTT GCTCGTTTTCGACCGGGACGACACCATCATCTTTGCGAGCGCCGCAATAGTGCAATTCTTCCCCGTGCCCGCCGCCATGC TGCTGCCTGGAACGCAGCTGCGAAGCTTCCTTGGCGCGGTCTACGATACGGGCGTGCGTCCCGGAACCTTGCCGGAGTCC AGCCGGCACCGGCCGAATCGCGAGGAGTGGATCGCCGAGCAGATGGCGCTTCACTGGCGGGAGCGTTACGAAAACGTCGA GCGGGCCGGCCGCACACGCTGGCTCTTTCTGCGTCAGCGGCGCCTGTCGAGCGGCATCGGCATTCTCGCCGTCAGCGACG TCTCGGAACAGAAAAAGCGCGACGAACATTTCCGCGCCGATCTCGAGCGGATCACACTGACACAAGAGATACTCCATGCT CAGCCCAATCCCATATGCGTCAAAGACCGCAGCCTCAACTACATCGCCGTAAACAGAGCCTTCTGCGCCATTCACGACCT ATCCCCCGACGCCATGCTTGGACGCTCGGCAGCGGACCTCCTGGGACCTGAGGTTGCGGAGCACTTCGATCGCTCGGATC GTCACGTCCTCGAGACAGGCACGTCGCACTCTGAAGCTGAGCACATCGTTCGGGCTGACGGCAGCGACCTTTGGGTGGTG ACGCGCAAATACCGCGTCGGATTGCCAGGCCGCCATTTCCTGGTCACCTGCATGAATGACGTCACCGATATCGCCGTCTG GTACGACGGCTCGGAAAAGGGCGGAGATACCGGCCTGCAGATCCGTGACTACAGCATCTTCACGCCAGCTCAGAATTTCT ACGATCCCTTCCGTTCGCCCGCCGTGTCGCAACGCGTCGATCCCGAGCCGAACGACGACGTGCCCCCGGCGCTTGGGGCG TTGCGCGTGCTTCTGGCGACCGCCGACGTGGAAATGGAGGAGCGCTTCGTGACGCGGCTGCGTGGCTCCGGGCTCGACGC CTGTGCAGTCCGCAATATCGAGGAGCTCGACGCCTTTGCGGTCGCCGCGGAAGGCCGCGGATTGGAGCTCGACCTTCTAT TGCTCGACGTCGCGCTTCCGGGGAGGCACCGCGTTCTGACCTCCTGGCGCGCCTGTACCTGGGTCGAGGTGTCGAGCGAT ATGGATGCGACGGTGCTGCTTGCGGAGATTTTCGGCGTCTGTGCCAATAGCACGCGTTCTGCGCTTCCGAAATCCGAATG GGGGATGGCGTTCGACAGCGATCCCGTGCCCGCGGCGCAAGTCGCCATGGTGGACGTGCTCGTCGCGGAGGACAACCAGG TCAACCAGTTCGTATTCGCGCAGATTCTGGAGGGCCTCGGCATCAGCCATCGGATCGCGGCAGACGGAAGAGAAGCAGTG GACCTTTGGCATGAGCTCCAGCCCGCCCTCGTTCTGATGGACGTGTCCATGCCTGTCATGAACGGCTTCGAGGCTGCTGT GGCCATACGCGAGGCTGAGAGGCCCGCGGGTCGTCGCACGACCATCGTGGCTGTGACTGCGCAGGCTCTCGATATCGACC TTGAGCACTGCAGGACATCGGGAATGGACGACCACATCATGAAGCCGATCAGCCCGGACATGATCGAGATGCTGCTCCGG AAATACCTGCCGGCAGTCGATACATACGCTTCGGGTTCTGTCCGGAGCGGGTCGCGATGA
Upstream 100 bases:
>100_bases AACCGCTGCTGAGCGAGCTATGAAACCGTTCAGCAGTCAGATTGCTGCAGTACCCGTACGTCCAAGGACGGCTGGCTGTA GCGGTAACGAGGGCAGCGCG
Downstream 100 bases:
>100_bases CATTGCGGGAGCTCGGACTCGATCGGCCGAATCGGGAAAAGCCGCGCAGCGCGTCATTCGTCGATCCGTTGACGGGGCTC GGCAACGCAGTCCACCTTGA
Product: putative PAS/PAC sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MGDVASDGADISRNILEASGEALGAALLVFDRDDTIIFASAAIVQFFPVPAAMLLPGTQLRSFLGAVYDTGVRPGTLPES SRHRPNREEWIAEQMALHWRERYENVERAGRTRWLFLRQRRLSSGIGILAVSDVSEQKKRDEHFRADLERITLTQEILHA QPNPICVKDRSLNYIAVNRAFCAIHDLSPDAMLGRSAADLLGPEVAEHFDRSDRHVLETGTSHSEAEHIVRADGSDLWVV TRKYRVGLPGRHFLVTCMNDVTDIAVWYDGSEKGGDTGLQIRDYSIFTPAQNFYDPFRSPAVSQRVDPEPNDDVPPALGA LRVLLATADVEMEERFVTRLRGSGLDACAVRNIEELDAFAVAAEGRGLELDLLLLDVALPGRHRVLTSWRACTWVEVSSD MDATVLLAEIFGVCANSTRSALPKSEWGMAFDSDPVPAAQVAMVDVLVAEDNQVNQFVFAQILEGLGISHRIAADGREAV DLWHELQPALVLMDVSMPVMNGFEAAVAIREAERPAGRRTTIVAVTAQALDIDLEHCRTSGMDDHIMKPISPDMIEMLLR KYLPAVDTYASGSVRSGSR
Sequences:
>Translated_579_residues MGDVASDGADISRNILEASGEALGAALLVFDRDDTIIFASAAIVQFFPVPAAMLLPGTQLRSFLGAVYDTGVRPGTLPES SRHRPNREEWIAEQMALHWRERYENVERAGRTRWLFLRQRRLSSGIGILAVSDVSEQKKRDEHFRADLERITLTQEILHA QPNPICVKDRSLNYIAVNRAFCAIHDLSPDAMLGRSAADLLGPEVAEHFDRSDRHVLETGTSHSEAEHIVRADGSDLWVV TRKYRVGLPGRHFLVTCMNDVTDIAVWYDGSEKGGDTGLQIRDYSIFTPAQNFYDPFRSPAVSQRVDPEPNDDVPPALGA LRVLLATADVEMEERFVTRLRGSGLDACAVRNIEELDAFAVAAEGRGLELDLLLLDVALPGRHRVLTSWRACTWVEVSSD MDATVLLAEIFGVCANSTRSALPKSEWGMAFDSDPVPAAQVAMVDVLVAEDNQVNQFVFAQILEGLGISHRIAADGREAV DLWHELQPALVLMDVSMPVMNGFEAAVAIREAERPAGRRTTIVAVTAQALDIDLEHCRTSGMDDHIMKPISPDMIEMLLR KYLPAVDTYASGSVRSGSR >Mature_578_residues GDVASDGADISRNILEASGEALGAALLVFDRDDTIIFASAAIVQFFPVPAAMLLPGTQLRSFLGAVYDTGVRPGTLPESS RHRPNREEWIAEQMALHWRERYENVERAGRTRWLFLRQRRLSSGIGILAVSDVSEQKKRDEHFRADLERITLTQEILHAQ PNPICVKDRSLNYIAVNRAFCAIHDLSPDAMLGRSAADLLGPEVAEHFDRSDRHVLETGTSHSEAEHIVRADGSDLWVVT RKYRVGLPGRHFLVTCMNDVTDIAVWYDGSEKGGDTGLQIRDYSIFTPAQNFYDPFRSPAVSQRVDPEPNDDVPPALGAL RVLLATADVEMEERFVTRLRGSGLDACAVRNIEELDAFAVAAEGRGLELDLLLLDVALPGRHRVLTSWRACTWVEVSSDM DATVLLAEIFGVCANSTRSALPKSEWGMAFDSDPVPAAQVAMVDVLVAEDNQVNQFVFAQILEGLGISHRIAADGREAVD LWHELQPALVLMDVSMPVMNGFEAAVAIREAERPAGRRTTIVAVTAQALDIDLEHCRTSGMDDHIMKPISPDMIEMLLRK YLPAVDTYASGSVRSGSR
Specific function: Essential protein that is involved in the control of cell division, probably through the regulation of ctrA. Its phosphorylation status is regulated by PdhS [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm. Note=Localized at one pole of the cell. Colocalizes with pdhS (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI145693157, Length=172, Percent_Identity=29.6511627906977, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1789149, Length=162, Percent_Identity=27.7777777777778, Blast_Score=63, Evalue=6e-11, Organism=Escherichia coli, GI48994928, Length=137, Percent_Identity=32.8467153284672, Blast_Score=63, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6323034, Length=132, Percent_Identity=31.8181818181818, Blast_Score=76, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6322044, Length=128, Percent_Identity=36.71875, Blast_Score=74, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: 2.7.3.- [C]
Molecular weight: Translated: 63845; Mature: 63714
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDVASDGADISRNILEASGEALGAALLVFDRDDTIIFASAAIVQFFPVPAAMLLPGTQL CCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEEHHHHHHHHCCCHHHHCCCHHH RSFLGAVYDTGVRPGTLPESSRHRPNREEWIAEQMALHWRERYENVERAGRTRWLFLRQR HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RLSSGIGILAVSDVSEQKKRDEHFRADLERITLTQEILHAQPNPICVKDRSLNYIAVNRA HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCE FCAIHDLSPDAMLGRSAADLLGPEVAEHFDRSDRHVLETGTSHSEAEHIVRADGSDLWVV EEEEECCCCHHHHCCCHHHHCCHHHHHHCCCCCCCHHHCCCCHHHHHHHHCCCCCCEEEE TRKYRVGLPGRHFLVTCMNDVTDIAVWYDGSEKGGDTGLQIRDYSIFTPAQNFYDPFRSP EEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHCCC AVSQRVDPEPNDDVPPALGALRVLLATADVEMEERFVTRLRGSGLDACAVRNIEELDAFA CHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHEE VAAEGRGLELDLLLLDVALPGRHRVLTSWRACTWVEVSSDMDATVLLAEIFGVCANSTRS EEECCCCCEEEEEEEEECCCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHH ALPKSEWGMAFDSDPVPAAQVAMVDVLVAEDNQVNQFVFAQILEGLGISHRIAADGREAV CCCCCCCCCCCCCCCCCHHHHHEEEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCHHHH DLWHELQPALVLMDVSMPVMNGFEAAVAIREAERPAGRRTTIVAVTAQALDIDLEHCRTS HHHHHCCCEEEEEECCCHHHCCHHHHHHHHHHCCCCCCCEEEEEEEEHHHHCCHHHHHCC GMDDHIMKPISPDMIEMLLRKYLPAVDTYASGSVRSGSR CCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure GDVASDGADISRNILEASGEALGAALLVFDRDDTIIFASAAIVQFFPVPAAMLLPGTQL CCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEEHHHHHHHHCCCHHHHCCCHHH RSFLGAVYDTGVRPGTLPESSRHRPNREEWIAEQMALHWRERYENVERAGRTRWLFLRQR HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RLSSGIGILAVSDVSEQKKRDEHFRADLERITLTQEILHAQPNPICVKDRSLNYIAVNRA HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCE FCAIHDLSPDAMLGRSAADLLGPEVAEHFDRSDRHVLETGTSHSEAEHIVRADGSDLWVV EEEEECCCCHHHHCCCHHHHCCHHHHHHCCCCCCCHHHCCCCHHHHHHHHCCCCCCEEEE TRKYRVGLPGRHFLVTCMNDVTDIAVWYDGSEKGGDTGLQIRDYSIFTPAQNFYDPFRSP EEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHCCC AVSQRVDPEPNDDVPPALGALRVLLATADVEMEERFVTRLRGSGLDACAVRNIEELDAFA CHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHEE VAAEGRGLELDLLLLDVALPGRHRVLTSWRACTWVEVSSDMDATVLLAEIFGVCANSTRS EEECCCCCEEEEEEEEECCCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHH ALPKSEWGMAFDSDPVPAAQVAMVDVLVAEDNQVNQFVFAQILEGLGISHRIAADGREAV CCCCCCCCCCCCCCCCCHHHHHEEEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCHHHH DLWHELQPALVLMDVSMPVMNGFEAAVAIREAERPAGRRTTIVAVTAQALDIDLEHCRTS HHHHHCCCEEEEEECCCHHHCCHHHHHHHHHHCCCCCCCEEEEEEEEHHHHCCHHHHHCC GMDDHIMKPISPDMIEMLLRKYLPAVDTYASGSVRSGSR CCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Phosphotransferases with a nitrogenous group as acceptor [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA