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The map label for this gene is ycjN [C]

Identifier: 150395413

GI number: 150395413

Start: 205222

End: 206415

Strand: Direct

Name: ycjN [C]

Synonym: Smed_0186

Alternate gene names: 150395413

Gene position: 205222-206415 (Clockwise)

Preceding gene: 150395412

Following gene: 150395414

Centisome position: 5.43

GC content: 61.89

Gene sequence:

>1194_bases
ATGAAAATCTGGAAAATAGGCACCGCTCTCGCGGCATCGCTTCTGGCAAGCACCGCATCGGCGGAAACCGTTCGTTTCTG
GTATCACTTCGACAATCCGGAAAACCCGATGGCCGATCTGATCGCGAAATTCGAAGCGGCCAATCCGGGTATCGAGATCG
AAGCGGAAAACGTTCCGTGGAACAGCTACTACGATAATCTCTACACCGCGCTCGTCGGCGGCAACGCGCCGGACGCCGCG
ATGGTCAAGCTCTTCGCCCAGCCGCGCCTCATCGAAATGGGCGCGCTGGAGCCGCTCGGCGAGCGCATTGACGGCTGGGC
CGGCAAGGCGGACCTGCTCGACAACCTCCTCGACCTCAACAAGGGGTCGGACGGTCAGCAGTACTACCTGCCGATCCAGT
ATGTCGTGCTTTATCTTTACTACCGCGCCGACCTGTTCGACGCCGCCGGCCTGAAGCCGCCGGCGACCTGCGACGCGTTC
CGCGACGCGGCGATCAAGCTCACCAAGCAGCCGGCGACCTACGGCTTCGGCCTGCGCGGCGGCAAGGGTGGCTGGGACCA
GTGGGGGGCCTTCGTGCTGTCGCAGGGCGCGAAGCTTGAGCCGGGCGGTCTGACGACGCCGCAGGCGATCGCTGCCAACC
AGTGGCTGATCGATCTGTTCCAGAAGGACAAGGTCATTCCGCCCTCGGCACCGAATGACGGCTTCCAGGAAATCACCGCC
GCCTTCAAGAAAGGGACCACGGCCATGACCATTCATCATGTCGGCTCGTCGAACGACATGGTCAAGGCACTCGGTGACAA
GGTCTCGGCGGTGCCGTTGCCGGAATGCGGCGGCGGCCGCTGGACGTCCTATGGCGACGAGTCGTTGGCTATCTTCTCCT
CCTCGGAGGTGAAGGATTCCGCGTGGAAGTGGATCTCGTTTCTTGCCGAGGGCGAGAACAACGTCGCCTTCAACAAGGCG
ACCGGGCAAATGACGGTGACCAAGAGCGGTTCGGAAAATTGGACGCTGCATGAGCGCCGCTTTGTCGATGCGACGGTACA
ATCGCTGCCCTTCGCCCATGTGCTGCCGCAGAACACCGCGACGTCCGAGTTCGTCAACACGGCCTGGCAAACGGCCATGC
AACAGGCGCTGACGGGCCAGATCACCTCCGAAGAGATGATGAAGCAGCTCGAAGCTCTTTTCGTGCAGCAATGA

Upstream 100 bases:

>100_bases
CCCTCGATCTCGCCGCCGCGCGGGAGGCGCTTGCGAAGGCAGGTGCCGAAGCCCGGCGAATGGCAGGCGCGAACTGAAGC
GATTTTCAAAGGAGGAGACA

Downstream 100 bases:

>100_bases
TGTCGTGGAGCGGGTGATTCTCCACCCACTTCGACTTCCCATCCGCCCCGCCCTGATATCAGGGCGGATGGGGCCTTTCG
ATTGCCAACGGCCGGGAACG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MKIWKIGTALAASLLASTASAETVRFWYHFDNPENPMADLIAKFEAANPGIEIEAENVPWNSYYDNLYTALVGGNAPDAA
MVKLFAQPRLIEMGALEPLGERIDGWAGKADLLDNLLDLNKGSDGQQYYLPIQYVVLYLYYRADLFDAAGLKPPATCDAF
RDAAIKLTKQPATYGFGLRGGKGGWDQWGAFVLSQGAKLEPGGLTTPQAIAANQWLIDLFQKDKVIPPSAPNDGFQEITA
AFKKGTTAMTIHHVGSSNDMVKALGDKVSAVPLPECGGGRWTSYGDESLAIFSSSEVKDSAWKWISFLAEGENNVAFNKA
TGQMTVTKSGSENWTLHERRFVDATVQSLPFAHVLPQNTATSEFVNTAWQTAMQQALTGQITSEEMMKQLEALFVQQ

Sequences:

>Translated_397_residues
MKIWKIGTALAASLLASTASAETVRFWYHFDNPENPMADLIAKFEAANPGIEIEAENVPWNSYYDNLYTALVGGNAPDAA
MVKLFAQPRLIEMGALEPLGERIDGWAGKADLLDNLLDLNKGSDGQQYYLPIQYVVLYLYYRADLFDAAGLKPPATCDAF
RDAAIKLTKQPATYGFGLRGGKGGWDQWGAFVLSQGAKLEPGGLTTPQAIAANQWLIDLFQKDKVIPPSAPNDGFQEITA
AFKKGTTAMTIHHVGSSNDMVKALGDKVSAVPLPECGGGRWTSYGDESLAIFSSSEVKDSAWKWISFLAEGENNVAFNKA
TGQMTVTKSGSENWTLHERRFVDATVQSLPFAHVLPQNTATSEFVNTAWQTAMQQALTGQITSEEMMKQLEALFVQQ
>Mature_397_residues
MKIWKIGTALAASLLASTASAETVRFWYHFDNPENPMADLIAKFEAANPGIEIEAENVPWNSYYDNLYTALVGGNAPDAA
MVKLFAQPRLIEMGALEPLGERIDGWAGKADLLDNLLDLNKGSDGQQYYLPIQYVVLYLYYRADLFDAAGLKPPATCDAF
RDAAIKLTKQPATYGFGLRGGKGGWDQWGAFVLSQGAKLEPGGLTTPQAIAANQWLIDLFQKDKVIPPSAPNDGFQEITA
AFKKGTTAMTIHHVGSSNDMVKALGDKVSAVPLPECGGGRWTSYGDESLAIFSSSEVKDSAWKWISFLAEGENNVAFNKA
TGQMTVTKSGSENWTLHERRFVDATVQSLPFAHVLPQNTATSEFVNTAWQTAMQQALTGQITSEEMMKQLEALFVQQ

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 43322; Mature: 43322

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIWKIGTALAASLLASTASAETVRFWYHFDNPENPMADLIAKFEAANPGIEIEAENVPW
CCEEEHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCC
NSYYDNLYTALVGGNAPDAAMVKLFAQPRLIEMGALEPLGERIDGWAGKADLLDNLLDLN
HHHHHHHHHHEECCCCCHHHHHHHHCCCCEEECCCCCHHHHHHCCCCCHHHHHHHHHHCC
KGSDGQQYYLPIQYVVLYLYYRADLFDAAGLKPPATCDAFRDAAIKLTKQPATYGFGLRG
CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCC
GKGGWDQWGAFVLSQGAKLEPGGLTTPQAIAANQWLIDLFQKDKVIPPSAPNDGFQEITA
CCCCHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
AFKKGTTAMTIHHVGSSNDMVKALGDKVSAVPLPECGGGRWTSYGDESLAIFSSSEVKDS
HHHCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHH
AWKWISFLAEGENNVAFNKATGQMTVTKSGSENWTLHERRFVDATVQSLPFAHVLPQNTA
HHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCEEHHHHHHHHHHHHCCCHHCCCCCCC
TSEFVNTAWQTAMQQALTGQITSEEMMKQLEALFVQQ
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIWKIGTALAASLLASTASAETVRFWYHFDNPENPMADLIAKFEAANPGIEIEAENVPW
CCEEEHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCC
NSYYDNLYTALVGGNAPDAAMVKLFAQPRLIEMGALEPLGERIDGWAGKADLLDNLLDLN
HHHHHHHHHHEECCCCCHHHHHHHHCCCCEEECCCCCHHHHHHCCCCCHHHHHHHHHHCC
KGSDGQQYYLPIQYVVLYLYYRADLFDAAGLKPPATCDAFRDAAIKLTKQPATYGFGLRG
CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCC
GKGGWDQWGAFVLSQGAKLEPGGLTTPQAIAANQWLIDLFQKDKVIPPSAPNDGFQEITA
CCCCHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
AFKKGTTAMTIHHVGSSNDMVKALGDKVSAVPLPECGGGRWTSYGDESLAIFSSSEVKDS
HHHCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHH
AWKWISFLAEGENNVAFNKATGQMTVTKSGSENWTLHERRFVDATVQSLPFAHVLPQNTA
HHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCEEHHHHHHHHHHHHCCCHHCCCCCCC
TSEFVNTAWQTAMQQALTGQITSEEMMKQLEALFVQQ
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA