| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is aes [H]
Identifier: 150395412
GI number: 150395412
Start: 204218
End: 205198
Strand: Direct
Name: aes [H]
Synonym: Smed_0185
Alternate gene names: 150395412
Gene position: 204218-205198 (Clockwise)
Preceding gene: 150395411
Following gene: 150395413
Centisome position: 5.4
GC content: 68.5
Gene sequence:
>981_bases ATGAGCGCGGCGCCGGACCTGTCGCGGCTGTCGCCGGAAATGGCGGCGCTGCTCCTGCGCGTGGCTGCCGAAACGGGGCC GCAGGTCGATCCCACGACCTTGCCGCCGGCCGAGGGCCGCTCGCTTTCGGAAGAGGGCAACCGGCGGTGGAACGTCGGGC TGCCGGAAATGGCGGCGGTCGGAGAGGCTTTTGTCGAGGCGGACGCGGCTATCGGCTCGGCGCGCCTGCGCCTCAAGATA CTGGTGCCGCCGGGCGCCGGCTCCGGTGCGGTGGTCTTTGTGCATGGCGGCGGCTTTGCCTTCTGCAGCCCGGAATCGCA TGAGCGCTGTGCGCGCGTTCTCGCGCTGGAATGCGGCCTGCCGGTGCTCCTGCCGGATTATCGCCTGGCGCCGGAAAATC CCTATCCCGCCGGCCTGATGGATGTTGTCGCGACGATCCGCAACGCATTTGCAGTCTCGGCGCCCTTCGGCGTGGCGGCG GGCCCGCTACTCCTTTCCGGCGATTCGGCGGGCGCCAATCTTGCACTCGCCGCACTGTTGCACGAAGCGGCGGCGGGGCG CCCGCGAATGGCTGGTGCACTCCTTTTCTACGGAACCTATGCCGGCGATTTCCGCACGGAGTCCTATCGAAATTTCGAGA ATGGGCCGGGTTTGACGACGGCGAAGATGCAGCGCTACTGGCGCTGGTATGTCGGCGACCGCGACGTTTCGGCTGATCCG CTCGCATGTCCGCTTCTCGCCTCCGATGAGGCCTTGGCGGCTCTGCCGCCGCTTCATCTGATGGCGGCGGGCGTCGACCC GCTGCTGTCGGACAGCATCGCGCTGCACCAACGCCTGAAGCAACTCGGGCGGGGCGAGGCGCTGATGGTGGTGCCCGGCG TCACGCACGGCTTCTTGCAGAACACCCTCGATCTCGCCGCCGCGCGGGAGGCGCTTGCGAAGGCAGGTGCCGAAGCCCGG CGAATGGCAGGCGCGAACTGA
Upstream 100 bases:
>100_bases CGATCGAAAGCGGCGATGTCGCGAAGGCCGGCGCAGCCCTGCGCCATCACATCGCGACGATCGTTGATCTGGGCCCCGAC GTCTTCCCGGATGCGACCCA
Downstream 100 bases:
>100_bases AGCGATTTTCAAAGGAGGAGACAATGAAAATCTGGAAAATAGGCACCGCTCTCGCGGCATCGCTTCTGGCAAGCACCGCA TCGGCGGAAACCGTTCGTTT
Product: alpha/beta hydrolase domain-containing protein
Products: alcohol; a carboxylate [C]
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSAAPDLSRLSPEMAALLLRVAAETGPQVDPTTLPPAEGRSLSEEGNRRWNVGLPEMAAVGEAFVEADAAIGSARLRLKI LVPPGAGSGAVVFVHGGGFAFCSPESHERCARVLALECGLPVLLPDYRLAPENPYPAGLMDVVATIRNAFAVSAPFGVAA GPLLLSGDSAGANLALAALLHEAAAGRPRMAGALLFYGTYAGDFRTESYRNFENGPGLTTAKMQRYWRWYVGDRDVSADP LACPLLASDEALAALPPLHLMAAGVDPLLSDSIALHQRLKQLGRGEALMVVPGVTHGFLQNTLDLAAAREALAKAGAEAR RMAGAN
Sequences:
>Translated_326_residues MSAAPDLSRLSPEMAALLLRVAAETGPQVDPTTLPPAEGRSLSEEGNRRWNVGLPEMAAVGEAFVEADAAIGSARLRLKI LVPPGAGSGAVVFVHGGGFAFCSPESHERCARVLALECGLPVLLPDYRLAPENPYPAGLMDVVATIRNAFAVSAPFGVAA GPLLLSGDSAGANLALAALLHEAAAGRPRMAGALLFYGTYAGDFRTESYRNFENGPGLTTAKMQRYWRWYVGDRDVSADP LACPLLASDEALAALPPLHLMAAGVDPLLSDSIALHQRLKQLGRGEALMVVPGVTHGFLQNTLDLAAAREALAKAGAEAR RMAGAN >Mature_325_residues SAAPDLSRLSPEMAALLLRVAAETGPQVDPTTLPPAEGRSLSEEGNRRWNVGLPEMAAVGEAFVEADAAIGSARLRLKIL VPPGAGSGAVVFVHGGGFAFCSPESHERCARVLALECGLPVLLPDYRLAPENPYPAGLMDVVATIRNAFAVSAPFGVAAG PLLLSGDSAGANLALAALLHEAAAGRPRMAGALLFYGTYAGDFRTESYRNFENGPGLTTAKMQRYWRWYVGDRDVSADPL ACPLLASDEALAALPPLHLMAAGVDPLLSDSIALHQRLKQLGRGEALMVVPGVTHGFLQNTLDLAAAREALAKAGAEARR MAGAN
Specific function: Displays esterase activity towards short chain fatty esters (acyl chain length of up to 8 carbons). Able to hydrolyze triacetylglycerol (triacetin) and tributyrylglycerol (tributyrin), but not trioleylglycerol (triolein) or cholesterol oleate. Negatively
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1786682, Length=318, Percent_Identity=29.2452830188679, Blast_Score=114, Evalue=6e-27, Organism=Caenorhabditis elegans, GI71996133, Length=154, Percent_Identity=35.7142857142857, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17540028, Length=174, Percent_Identity=31.6091954022989, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI72001146, Length=133, Percent_Identity=34.5864661654135, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17567059, Length=292, Percent_Identity=23.6301369863014, Blast_Score=68, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: 3.1.1.- [C]
Molecular weight: Translated: 34009; Mature: 33878
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS01173 LIPASE_GDXG_HIS ; PS01174 LIPASE_GDXG_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAPDLSRLSPEMAALLLRVAAETGPQVDPTTLPPAEGRSLSEEGNRRWNVGLPEMAAV CCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCEECCCCCHHHHH GEAFVEADAAIGSARLRLKILVPPGAGSGAVVFVHGGGFAFCSPESHERCARVLALECGL HHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHCCC PVLLPDYRLAPENPYPAGLMDVVATIRNAFAVSAPFGVAAGPLLLSGDSAGANLALAALL CEECCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCHHHHHHHH HEAAAGRPRMAGALLFYGTYAGDFRTESYRNFENGPGLTTAKMQRYWRWYVGDRDVSADP HHHHCCCCCHHCEEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC LACPLLASDEALAALPPLHLMAAGVDPLLSDSIALHQRLKQLGRGEALMVVPGVTHGFLQ CCCCEECCCCHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH NTLDLAAAREALAKAGAEARRMAGAN HHHHHHHHHHHHHHCCHHHHHHCCCC >Mature Secondary Structure SAAPDLSRLSPEMAALLLRVAAETGPQVDPTTLPPAEGRSLSEEGNRRWNVGLPEMAAV CCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCEECCCCCHHHHH GEAFVEADAAIGSARLRLKILVPPGAGSGAVVFVHGGGFAFCSPESHERCARVLALECGL HHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHCCC PVLLPDYRLAPENPYPAGLMDVVATIRNAFAVSAPFGVAAGPLLLSGDSAGANLALAALL CEECCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCHHHHHHHH HEAAAGRPRMAGALLFYGTYAGDFRTESYRNFENGPGLTTAKMQRYWRWYVGDRDVSADP HHHHCCCCCHHCEEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC LACPLLASDEALAALPPLHLMAAGVDPLLSDSIALHQRLKQLGRGEALMVVPGVTHGFLQ CCCCEECCCCHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH NTLDLAAAREALAKAGAEARRMAGAN HHHHHHHHHHHHHHCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Carboxylic ester; H2O [C]
Specific reaction: Carboxylic ester + H2O = an alcohol + carboxylate [C]
General reaction: Hydrolase; Acting on ester bonds; Carboxylic ester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA