| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is yccM [C]
Identifier: 150401151
GI number: 150401151
Start: 741422
End: 742096
Strand: Reverse
Name: yccM [C]
Synonym: Maeo_0722
Alternate gene names: 150401151
Gene position: 742096-741422 (Counterclockwise)
Preceding gene: 150401152
Following gene: 150401150
Centisome position: 47.28
GC content: 27.7
Gene sequence:
>675_bases ATGGATTTTAATAAAATAAAATTAAAAAAATGGTTTCCAACTATTATGAAATATTTATTTTTCATTGTATCATTGGAAAC TATTGTATTGGTAATGCTCAGGTGCCCTTATGTAATTCCCTTTTTAGCCTGTGATATGTGCCCTGTGGTAGATTGTCCAT CTAAATATTATAGAAAACCTTTTGTAGCTTTTATTGTTGGATATATGATTATATTTAAGGCTGATTTTTGTAGTAAAATT TGCCCCTTCGGGTCATTAAATGATATATTATATAAAATTAGAAGAAAAATTTCAAAAAAACCATTTAAATTATCGTTGGA AACTAAAACAATATTAAATTTTTTAAAATATCTGTTCTTTGTATGTGCCATAATTGCCATATTTTATGGAAATCCAAGGT ATTACATACCAATTCATACTTCTGACCTAATGACTTCTTTAAAATTAGCATATTTAGCGGCCGGAAATGCATATTTTGCC CGATTATATGTTATAGTGGGAGCTTTATTATTGGGATTATTGTTAATTCCAAGATTTTGGTGTAGATATATTTGTCCATT GGGAACCAGTATTCAATTAACAAAAAAAGGAATAAGAAAAATAAAAACCGTCAATGCTGTAAAATCCTGCGGTGACTGTT CAAAGTGTGGAAAAAATGATAATAAATATAACTAA
Upstream 100 bases:
>100_bases TATCCCATTCTACTTAATTATTTTGGACTAATATAGGACAGTTTTTGAAGATTAACTATATTTATGGTTAATTTATTTTT ATGGTATATTTGGTGAAACT
Downstream 100 bases:
>100_bases TATAACTAATATAATTAATATCAATACAATATTTATTATATTGGAACATTCTTTTAATTTTTTTTGGATGGCACTTCCAT ATATTTTATTTGGGTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MDFNKIKLKKWFPTIMKYLFFIVSLETIVLVMLRCPYVIPFLACDMCPVVDCPSKYYRKPFVAFIVGYMIIFKADFCSKI CPFGSLNDILYKIRRKISKKPFKLSLETKTILNFLKYLFFVCAIIAIFYGNPRYYIPIHTSDLMTSLKLAYLAAGNAYFA RLYVIVGALLLGLLLIPRFWCRYICPLGTSIQLTKKGIRKIKTVNAVKSCGDCSKCGKNDNKYN
Sequences:
>Translated_224_residues MDFNKIKLKKWFPTIMKYLFFIVSLETIVLVMLRCPYVIPFLACDMCPVVDCPSKYYRKPFVAFIVGYMIIFKADFCSKI CPFGSLNDILYKIRRKISKKPFKLSLETKTILNFLKYLFFVCAIIAIFYGNPRYYIPIHTSDLMTSLKLAYLAAGNAYFA RLYVIVGALLLGLLLIPRFWCRYICPLGTSIQLTKKGIRKIKTVNAVKSCGDCSKCGKNDNKYN >Mature_224_residues MDFNKIKLKKWFPTIMKYLFFIVSLETIVLVMLRCPYVIPFLACDMCPVVDCPSKYYRKPFVAFIVGYMIIFKADFCSKI CPFGSLNDILYKIRRKISKKPFKLSLETKTILNFLKYLFFVCAIIAIFYGNPRYYIPIHTSDLMTSLKLAYLAAGNAYFA RLYVIVGALLLGLLLIPRFWCRYICPLGTSIQLTKKGIRKIKTVNAVKSCGDCSKCGKNDNKYN
Specific function: Unknown
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25850; Mature: 25850
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFNKIKLKKWFPTIMKYLFFIVSLETIVLVMLRCPYVIPFLACDMCPVVDCPSKYYRKP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCH FVAFIVGYMIIFKADFCSKICPFGSLNDILYKIRRKISKKPFKLSLETKTILNFLKYLFF HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHH VCAIIAIFYGNPRYYIPIHTSDLMTSLKLAYLAAGNAYFARLYVIVGALLLGLLLIPRFW HHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH CRYICPLGTSIQLTKKGIRKIKTVNAVKSCGDCSKCGKNDNKYN HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC >Mature Secondary Structure MDFNKIKLKKWFPTIMKYLFFIVSLETIVLVMLRCPYVIPFLACDMCPVVDCPSKYYRKP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCH FVAFIVGYMIIFKADFCSKICPFGSLNDILYKIRRKISKKPFKLSLETKTILNFLKYLFF HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHH VCAIIAIFYGNPRYYIPIHTSDLMTSLKLAYLAAGNAYFARLYVIVGALLLGLLLIPRFW HHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH CRYICPLGTSIQLTKKGIRKIKTVNAVKSCGDCSKCGKNDNKYN HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA