Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is yraQ [C]

Identifier: 150401150

GI number: 150401150

Start: 740542

End: 741450

Strand: Reverse

Name: yraQ [C]

Synonym: Maeo_0721

Alternate gene names: 150401150

Gene position: 741450-740542 (Counterclockwise)

Preceding gene: 150401151

Following gene: 150401141

Centisome position: 47.24

GC content: 26.29

Gene sequence:

>909_bases
GTGGAAAAAATGATAATAAATATAACTAATATAACTAATATAATTAATATCAATACAATATTTATTATATTGGAACATTC
TTTTAATTTTTTTTGGATGGCACTTCCATATATTTTATTTGGGTTTATTTTATCGACCATCATAAAAATGAATATTAATA
GTAATTTTAAAAAAAGAATACTCCATAATTTGGATGGCAGTATTATCTCCCTACTAATATTATCATTTATTGGGGCAATA
CTGCCTTTATGTTCTGCAAGTGGTATTCCCGTAGCAAATGCCTTAAATTCAAAAAATGCAAATTTAGGAATGAGTATGGC
ATTTATCGTGTCAGCTGCCTCAATAAATCCCATAACCATTATGCTAACATTGTCCATGTTAGGCTATGAAATGACAATTA
TTCAAATATTGGCATCGTTGATGTTATCTATTTTGGTGGGTTTGCTGTTTTATAATGAGGGAGCTCCCATTATCAACTAT
GATATAATTGTTAAAAATAAAAATTATCATGAAAATTTTTTTGAAATATTCATTGGGCAATTAAAAAAATTTCTTCCCTC
AATGGTGCTTGGATTTTTGATATCTGGGATTATTATTACTTTTATTTCAAAAGATGCCATATTATTAATTCTTTCAAATA
ATATTTATTCATATTTTTATGTTTCAATACTTAGGGTATTTATTTTTTTATGTCCTCATGCAATGATACCAATTATAAAA
TCTGTTGCGATTGAAGGAATTCAAAAAGGATTGATAATTTCATTTTTAATATCTGCTCCAACTTTGGGGCTTCCCCTGTT
ATTAACTATGAAAAAAGGATATGGGCTAAAAATAACATTAAAATATTTTGGTAGTGTGGTTTTAATAAGTGCTTTAATTG
GAATGATATATGATTTTATAATTAGATAA

Upstream 100 bases:

>100_bases
TATATTTGTCCATTGGGAACCAGTATTCAATTAACAAAAAAAGGAATAAGAAAAATAAAAACCGTCAATGCTGTAAAATC
CTGCGGTGACTGTTCAAAGT

Downstream 100 bases:

>100_bases
TTATAAAAAAATTATTCAATAGGAAACCTTAATAAACCTCCTATTCCACCAAGTGCTTTCAACTGTTTTCCTACATCATA
TTCTGTGGAGATTATAATGG

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MEKMIINITNITNIININTIFIILEHSFNFFWMALPYILFGFILSTIIKMNINSNFKKRILHNLDGSIISLLILSFIGAI
LPLCSASGIPVANALNSKNANLGMSMAFIVSAASINPITIMLTLSMLGYEMTIIQILASLMLSILVGLLFYNEGAPIINY
DIIVKNKNYHENFFEIFIGQLKKFLPSMVLGFLISGIIITFISKDAILLILSNNIYSYFYVSILRVFIFLCPHAMIPIIK
SVAIEGIQKGLIISFLISAPTLGLPLLLTMKKGYGLKITLKYFGSVVLISALIGMIYDFIIR

Sequences:

>Translated_302_residues
MEKMIINITNITNIININTIFIILEHSFNFFWMALPYILFGFILSTIIKMNINSNFKKRILHNLDGSIISLLILSFIGAI
LPLCSASGIPVANALNSKNANLGMSMAFIVSAASINPITIMLTLSMLGYEMTIIQILASLMLSILVGLLFYNEGAPIINY
DIIVKNKNYHENFFEIFIGQLKKFLPSMVLGFLISGIIITFISKDAILLILSNNIYSYFYVSILRVFIFLCPHAMIPIIK
SVAIEGIQKGLIISFLISAPTLGLPLLLTMKKGYGLKITLKYFGSVVLISALIGMIYDFIIR
>Mature_302_residues
MEKMIINITNITNIININTIFIILEHSFNFFWMALPYILFGFILSTIIKMNINSNFKKRILHNLDGSIISLLILSFIGAI
LPLCSASGIPVANALNSKNANLGMSMAFIVSAASINPITIMLTLSMLGYEMTIIQILASLMLSILVGLLFYNEGAPIINY
DIIVKNKNYHENFFEIFIGQLKKFLPSMVLGFLISGIIITFISKDAILLILSNNIYSYFYVSILRVFIFLCPHAMIPIIK
SVAIEGIQKGLIISFLISAPTLGLPLLLTMKKGYGLKITLKYFGSVVLISALIGMIYDFIIR

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33653; Mature: 33653

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKMIINITNITNIININTIFIILEHSFNFFWMALPYILFGFILSTIIKMNINSNFKKRI
CCCEEEEEEHHHHEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LHNLDGSIISLLILSFIGAILPLCSASGIPVANALNSKNANLGMSMAFIVSAASINPITI
HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCHH
MLTLSMLGYEMTIIQILASLMLSILVGLLFYNEGAPIINYDIIVKNKNYHENFFEIFIGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHH
LKKFLPSMVLGFLISGIIITFISKDAILLILSNNIYSYFYVSILRVFIFLCPHAMIPIIK
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHH
SVAIEGIQKGLIISFLISAPTLGLPLLLTMKKGYGLKITLKYFGSVVLISALIGMIYDFI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
IR
CC
>Mature Secondary Structure
MEKMIINITNITNIININTIFIILEHSFNFFWMALPYILFGFILSTIIKMNINSNFKKRI
CCCEEEEEEHHHHEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LHNLDGSIISLLILSFIGAILPLCSASGIPVANALNSKNANLGMSMAFIVSAASINPITI
HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCHH
MLTLSMLGYEMTIIQILASLMLSILVGLLFYNEGAPIINYDIIVKNKNYHENFFEIFIGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHH
LKKFLPSMVLGFLISGIIITFISKDAILLILSNNIYSYFYVSILRVFIFLCPHAMIPIIK
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHH
SVAIEGIQKGLIISFLISAPTLGLPLLLTMKKGYGLKITLKYFGSVVLISALIGMIYDFI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
IR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA