| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is yvgL [H]
Identifier: 150401152
GI number: 150401152
Start: 742294
End: 743157
Strand: Reverse
Name: yvgL [H]
Synonym: Maeo_0723
Alternate gene names: 150401152
Gene position: 743157-742294 (Counterclockwise)
Preceding gene: 150401153
Following gene: 150401151
Centisome position: 47.35
GC content: 30.79
Gene sequence:
>864_bases ATGAATAAATTAACAATAATATTAATTGGAATTATTGGGATAAGCCTTATGTTTAGTGGCTGTGTCTCCGATGCTTCAAA AACAGGAACAACAACGACAACAGAAACTCCGACATTGGTAGTTTATAGTTGCGGAGGCCCAACAGAAGCACTTCAAGAAG TAAATAAAGAATTTGAAAAAAAATATAACTGTAAAGTTGAATTTACAGGAGCATCAGCTGGAACTTTGAGGAAAGCAATA GAAAATGGTGCCTATACAGATGTATTTTTACCAAGAAGTATCAGTCATTCAGAAATATTAACAAACGAAAGTTTAATGGA ACCAGACTATAAAATCTACCAATTTACAGAATGGGTAATAATAACTCCGAAAGGAAACCCTAAGAATATAACTAAATTAG AAGATTTATTGGAAAAAGATGTTATAGTTTACACAAACTCAAAAGCAACGATTCCAGCAATAAAAGCATTAAAACCCGAA AAAGAATTAATCGAAAAAATTTATGAAAAAAGTTCAAAAGATTATGATTGTTATAGGAAGATGTTGGATGCTGTTGTAGA TAGAAAATGTGATGCTGCATTAGTTGAAAGAAGATGCATAACATTGGAGGGAATAAAGGGAAATGTTGAAGTTATAGATA TTCCCAGAGAATACCTCGATATACAAAAAGGCGTTTTCACAGTAGGAGTTATGAAAAACTCAAAAGAAAAAGATTTGGCA TATAAATATAAGGAATTTGTGCTCTCTGATGAAGGACAAAATATATTGGAAAAACATGGATTCTATCCGGTAAAATCTAA AAAAGGTAATGAATTATTAAATAACTATTATTCGGAGTATAAAGAGTTAACTCCTGCTAATTAA
Upstream 100 bases:
>100_bases TATTATTAATAATATTAAATAGAAATTTATATATACTATTTTAGTAAATTTAACCTCATACATTATTAATGACACATTAG AAAAATTAATAGGTGCAAAT
Downstream 100 bases:
>100_bases ATTTATTTCTCTTTTAATTTTTTATTAATGTTATTATGGTCAATCTTCGAACTGTTTCACACTATGATGGTGAAAATAAA ACTGTATTTCGTAGTTATAT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MNKLTIILIGIIGISLMFSGCVSDASKTGTTTTTETPTLVVYSCGGPTEALQEVNKEFEKKYNCKVEFTGASAGTLRKAI ENGAYTDVFLPRSISHSEILTNESLMEPDYKIYQFTEWVIITPKGNPKNITKLEDLLEKDVIVYTNSKATIPAIKALKPE KELIEKIYEKSSKDYDCYRKMLDAVVDRKCDAALVERRCITLEGIKGNVEVIDIPREYLDIQKGVFTVGVMKNSKEKDLA YKYKEFVLSDEGQNILEKHGFYPVKSKKGNELLNNYYSEYKELTPAN
Sequences:
>Translated_287_residues MNKLTIILIGIIGISLMFSGCVSDASKTGTTTTTETPTLVVYSCGGPTEALQEVNKEFEKKYNCKVEFTGASAGTLRKAI ENGAYTDVFLPRSISHSEILTNESLMEPDYKIYQFTEWVIITPKGNPKNITKLEDLLEKDVIVYTNSKATIPAIKALKPE KELIEKIYEKSSKDYDCYRKMLDAVVDRKCDAALVERRCITLEGIKGNVEVIDIPREYLDIQKGVFTVGVMKNSKEKDLA YKYKEFVLSDEGQNILEKHGFYPVKSKKGNELLNNYYSEYKELTPAN >Mature_287_residues MNKLTIILIGIIGISLMFSGCVSDASKTGTTTTTETPTLVVYSCGGPTEALQEVNKEFEKKYNCKVEFTGASAGTLRKAI ENGAYTDVFLPRSISHSEILTNESLMEPDYKIYQFTEWVIITPKGNPKNITKLEDLLEKDVIVYTNSKATIPAIKALKPE KELIEKIYEKSSKDYDCYRKMLDAVVDRKCDAALVERRCITLEGIKGNVEVIDIPREYLDIQKGVFTVGVMKNSKEKDLA YKYKEFVLSDEGQNILEKHGFYPVKSKKGNELLNNYYSEYKELTPAN
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005950 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 32369; Mature: 32369
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLTIILIGIIGISLMFSGCVSDASKTGTTTTTETPTLVVYSCGGPTEALQEVNKEFEK CCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH KYNCKVEFTGASAGTLRKAIENGAYTDVFLPRSISHSEILTNESLMEPDYKIYQFTEWVI HCCCEEEECCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCCCCCEEEEEEEEEE ITPKGNPKNITKLEDLLEKDVIVYTNSKATIPAIKALKPEKELIEKIYEKSSKDYDCYRK EECCCCCCCHHHHHHHHHCCEEEEECCCCCCCHHHHCCCHHHHHHHHHHCCCCCHHHHHH MLDAVVDRKCDAALVERRCITLEGIKGNVEVIDIPREYLDIQKGVFTVGVMKNSKEKDLA HHHHHHCCCCCHHHHHHHHEEEECCCCCEEEEECCHHHHHHHCCEEEEEEECCCCHHHHH YKYKEFVLSDEGQNILEKHGFYPVKSKKGNELLNNYYSEYKELTPAN HHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNKLTIILIGIIGISLMFSGCVSDASKTGTTTTTETPTLVVYSCGGPTEALQEVNKEFEK CCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH KYNCKVEFTGASAGTLRKAIENGAYTDVFLPRSISHSEILTNESLMEPDYKIYQFTEWVI HCCCEEEECCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCCCCCEEEEEEEEEE ITPKGNPKNITKLEDLLEKDVIVYTNSKATIPAIKALKPEKELIEKIYEKSSKDYDCYRK EECCCCCCCHHHHHHHHHCCEEEEECCCCCCCHHHHCCCHHHHHHHHHHCCCCCHHHHHH MLDAVVDRKCDAALVERRCITLEGIKGNVEVIDIPREYLDIQKGVFTVGVMKNSKEKDLA HHHHHHCCCCCHHHHHHHHEEEECCCCCEEEEECCHHHHHHHCCEEEEEEECCCCHHHHH YKYKEFVLSDEGQNILEKHGFYPVKSKKGNELLNNYYSEYKELTPAN HHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]