| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400864
Identifier: 150400864
GI number: 150400864
Start: 451136
End: 452080
Strand: Reverse
Name: 150400864
Synonym: Maeo_0432
Alternate gene names: NA
Gene position: 452080-451136 (Counterclockwise)
Preceding gene: 150400866
Following gene: 150400863
Centisome position: 28.8
GC content: 22.86
Gene sequence:
>945_bases ATGCTATCCGATATATTATATAAGTTATCCTCAAATAAATATGATAATAATGTTATTTATTTTTCTAAAATACTTAGTGA TTATTATAAAAATAATAATATATTCCAATATAAAGATTATTTTGAAAGTATTGGCATTGTTGAAAAAAATGATTTGCTAT TATATGGAAAAAACTATCCGTTATTTAGGTCTTTATTGTATTTTAATGAAGTTCCACTGTTTAAAAATGAATCCCAGTCA ATTTTATTTTTAAAAAATAATAATTTTAATCCAAATGATAAATTGATAAATTTAAATAAAGATAAAAAAAAGAAATTGGG AATATTGTTATTAAAAGAAATTGCCAAAAATATACCTGCTGAATATGTAAAATATGCTCCAAAATTGATATTTGGTAAAT GCTATTATTTAAAAAAATATAATATTGAATTAAAAGAATATATTTCAAAATTAAATGCACTATATAAATTGAAAAAATAC AATGAAATTGAAAAATGTGTAATATATCAAAAATTGCCCGATGAAGAATTAGTAAATAAATATAAAATAAAATTGGCAAA ATCCATAAAATTATTTAATAAAGAGTTAAATAATAGAAAAATAAGATACACCACTATTGAACGAAATGGCAGGGAGCTCC CCTGTCAATATATTTATATAAAACAATCACTATTTGACAAAATAAAGGGCTGGGTTTTTGGCTCTATTGATGGGCAACAT TATCCAACGATTGTAAATACTGCATATTCCCATCCAAAAATAGATTATTTAAAACCATTTTTTATATTGGTGGATAATGG CAATATTGGTGTTTTTGCCGGAGCTCCGAAACTTTTATATTTTAAGGACAACTTAACATTAAATCATTTAAATTTGACTG GAAAACATACATATTTTGGGACTTGGGATTATGAAATGTTTGAAAAATTCATTGAGGGTAAATAA
Upstream 100 bases:
>100_bases CGATTTCAGGGGTTAGATTTTTCATTCTTATGCCCGATGTTCCAAATAATTTCATATTACCACCAAAAATTATAAATGAT ATTAATTAGTAGTTTGTATT
Downstream 100 bases:
>100_bases TATACTGTTAAGGGCATATAATGTATCAAATATTATGAGTTATTAATAAATATCAGGTATGGTGAAATTGATGAATATAT TAATAATTACAGAATATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MLSDILYKLSSNKYDNNVIYFSKILSDYYKNNNIFQYKDYFESIGIVEKNDLLLYGKNYPLFRSLLYFNEVPLFKNESQS ILFLKNNNFNPNDKLINLNKDKKKKLGILLLKEIAKNIPAEYVKYAPKLIFGKCYYLKKYNIELKEYISKLNALYKLKKY NEIEKCVIYQKLPDEELVNKYKIKLAKSIKLFNKELNNRKIRYTTIERNGRELPCQYIYIKQSLFDKIKGWVFGSIDGQH YPTIVNTAYSHPKIDYLKPFFILVDNGNIGVFAGAPKLLYFKDNLTLNHLNLTGKHTYFGTWDYEMFEKFIEGK
Sequences:
>Translated_314_residues MLSDILYKLSSNKYDNNVIYFSKILSDYYKNNNIFQYKDYFESIGIVEKNDLLLYGKNYPLFRSLLYFNEVPLFKNESQS ILFLKNNNFNPNDKLINLNKDKKKKLGILLLKEIAKNIPAEYVKYAPKLIFGKCYYLKKYNIELKEYISKLNALYKLKKY NEIEKCVIYQKLPDEELVNKYKIKLAKSIKLFNKELNNRKIRYTTIERNGRELPCQYIYIKQSLFDKIKGWVFGSIDGQH YPTIVNTAYSHPKIDYLKPFFILVDNGNIGVFAGAPKLLYFKDNLTLNHLNLTGKHTYFGTWDYEMFEKFIEGK >Mature_314_residues MLSDILYKLSSNKYDNNVIYFSKILSDYYKNNNIFQYKDYFESIGIVEKNDLLLYGKNYPLFRSLLYFNEVPLFKNESQS ILFLKNNNFNPNDKLINLNKDKKKKLGILLLKEIAKNIPAEYVKYAPKLIFGKCYYLKKYNIELKEYISKLNALYKLKKY NEIEKCVIYQKLPDEELVNKYKIKLAKSIKLFNKELNNRKIRYTTIERNGRELPCQYIYIKQSLFDKIKGWVFGSIDGQH YPTIVNTAYSHPKIDYLKPFFILVDNGNIGVFAGAPKLLYFKDNLTLNHLNLTGKHTYFGTWDYEMFEKFIEGK
Specific function: Unknown
COG id: COG0608
COG function: function code L; Single-stranded DNA-specific exonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0977 C-terminal region [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37335; Mature: 37335
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSDILYKLSSNKYDNNVIYFSKILSDYYKNNNIFQYKDYFESIGIVEKNDLLLYGKNYP CHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCEEEEHHHHHHCCCEECCCEEEEECCCH LFRSLLYFNEVPLFKNESQSILFLKNNNFNPNDKLINLNKDKKKKLGILLLKEIAKNIPA HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCH EYVKYAPKLIFGKCYYLKKYNIELKEYISKLNALYKLKKYNEIEKCVIYQKLPDEELVNK HHHHHCCHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHH YKIKLAKSIKLFNKELNNRKIRYTTIERNGRELPCQYIYIKQSLFDKIKGWVFGSIDGQH HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEHHHHHHHHCCEEEECCCCCC YPTIVNTAYSHPKIDYLKPFFILVDNGNIGVFAGAPKLLYFKDNLTLNHLNLTGKHTYFG CCCEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCEEEEEECCCEEEEEEECCCEEEEE TWDYEMFEKFIEGK CCCHHHHHHHHCCC >Mature Secondary Structure MLSDILYKLSSNKYDNNVIYFSKILSDYYKNNNIFQYKDYFESIGIVEKNDLLLYGKNYP CHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCEEEEHHHHHHCCCEECCCEEEEECCCH LFRSLLYFNEVPLFKNESQSILFLKNNNFNPNDKLINLNKDKKKKLGILLLKEIAKNIPA HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCH EYVKYAPKLIFGKCYYLKKYNIELKEYISKLNALYKLKKYNEIEKCVIYQKLPDEELVNK HHHHHCCHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHH YKIKLAKSIKLFNKELNNRKIRYTTIERNGRELPCQYIYIKQSLFDKIKGWVFGSIDGQH HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEHHHHHHHHCCEEEECCCCCC YPTIVNTAYSHPKIDYLKPFFILVDNGNIGVFAGAPKLLYFKDNLTLNHLNLTGKHTYFG CCCEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCEEEEEECCCEEEEEEECCCEEEEE TWDYEMFEKFIEGK CCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]