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The map label for this gene is yggB [C]

Identifier: 150400866

GI number: 150400866

Start: 453504

End: 454505

Strand: Reverse

Name: yggB [C]

Synonym: Maeo_0434

Alternate gene names: 150400866

Gene position: 454505-453504 (Counterclockwise)

Preceding gene: 150400867

Following gene: 150400864

Centisome position: 28.96

GC content: 30.64

Gene sequence:

>1002_bases
ATGGACAACAAATTAAAATTAAAATTTTTAATGAAAATATTTGCATTAATTATTATAGCATATTTTTTGGGAACCTATCT
AAATATATATTCTTATCTGTTAAATTTAGAAAAATATTATAGTAATATATTGGTATTAATAATATTATTTATTGGAACGA
TGATATTTCTTGATATATCCTTGGAGCTCCTGCGAAGATTTTTTGAAAAAAAAGGGGAACTAAGAGATTATCCTGTTGTG
GGGTCGGTATTCAAGTATATTACATGGTTTACCACAATATTGGTTGCCGTATCTATTTTATATCAAGGATTGGGTTCATT
AATAATGTCTCTTGGGCTTATTGGGGCAGGGATTACTTTTGCACTACAAAGACCAATTATGAATTTTGCAGGTTGGGTCA
ATATTGTCGTAACTCGACCATTTAAAATAAATGATAGAATAAATATTAAAGGCGTTGGTATGGGTGATGTTTATAAAATA
GACACCATGCATATTTATTTAAGTGAAGTGGATATGGAGCCATCAGGACGAAATTTAGTTATTCCAAATGCATTTGTATT
AACAAATGCCATAATAAATTATACAAAAGGTTCCCACTACATTTGGGACAGTGTAGAAATAGCCATTACTTACGAAAGTA
ATTGGAAAAAGGCCGAGAAGTTAGTTTTTGAGGCCGCAGATGGGATTGTAGGGGAGGATATGCGAAGATTGGCAAAAATT
TGGGAATCGCGACCCCGACAATTTGCGAAAAATAAGACAAATCCAAAACCCATGATTCGTATAAGTTTATTTGAGAATGG
AATAAAAATAAAAGTTAGATATCTAGTAAATTCGTTGGAATGGGCACTAATAAAAACCCAAATTACGCAGAGAATTCTTG
AAAAAATAGGGCCCGAACCAGATGTCAATATAGCTTATCCACATATGGAGATTATATATGACGAAAAAAATAATTTGTAC
AAGAAGTTAGAAAATATTTCTAAAAAAAATAATAATATTTAG

Upstream 100 bases:

>100_bases
GTGAATCAGAGTATTTTTTTGTTATTTCTGTTAAATATTGTGGTGGTAAAAATTGTTCTTGACCATACATAAATAAAATA
TAAAAGGCGTGGGGAAAAAT

Downstream 100 bases:

>100_bases
TATATTATAATTATATTATTTATTTTTTTTCATTTAATCCATCTTTAACTAATTTAATACCTTTTTCTAAAAGTTCTTTT
GCAATGATATCATTTTTAGC

Product: MscS mechanosensitive ion channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MDNKLKLKFLMKIFALIIIAYFLGTYLNIYSYLLNLEKYYSNILVLIILFIGTMIFLDISLELLRRFFEKKGELRDYPVV
GSVFKYITWFTTILVAVSILYQGLGSLIMSLGLIGAGITFALQRPIMNFAGWVNIVVTRPFKINDRINIKGVGMGDVYKI
DTMHIYLSEVDMEPSGRNLVIPNAFVLTNAIINYTKGSHYIWDSVEIAITYESNWKKAEKLVFEAADGIVGEDMRRLAKI
WESRPRQFAKNKTNPKPMIRISLFENGIKIKVRYLVNSLEWALIKTQITQRILEKIGPEPDVNIAYPHMEIIYDEKNNLY
KKLENISKKNNNI

Sequences:

>Translated_333_residues
MDNKLKLKFLMKIFALIIIAYFLGTYLNIYSYLLNLEKYYSNILVLIILFIGTMIFLDISLELLRRFFEKKGELRDYPVV
GSVFKYITWFTTILVAVSILYQGLGSLIMSLGLIGAGITFALQRPIMNFAGWVNIVVTRPFKINDRINIKGVGMGDVYKI
DTMHIYLSEVDMEPSGRNLVIPNAFVLTNAIINYTKGSHYIWDSVEIAITYESNWKKAEKLVFEAADGIVGEDMRRLAKI
WESRPRQFAKNKTNPKPMIRISLFENGIKIKVRYLVNSLEWALIKTQITQRILEKIGPEPDVNIAYPHMEIIYDEKNNLY
KKLENISKKNNNI
>Mature_333_residues
MDNKLKLKFLMKIFALIIIAYFLGTYLNIYSYLLNLEKYYSNILVLIILFIGTMIFLDISLELLRRFFEKKGELRDYPVV
GSVFKYITWFTTILVAVSILYQGLGSLIMSLGLIGAGITFALQRPIMNFAGWVNIVVTRPFKINDRINIKGVGMGDVYKI
DTMHIYLSEVDMEPSGRNLVIPNAFVLTNAIINYTKGSHYIWDSVEIAITYESNWKKAEKLVFEAADGIVGEDMRRLAKI
WESRPRQFAKNKTNPKPMIRISLFENGIKIKVRYLVNSLEWALIKTQITQRILEKIGPEPDVNIAYPHMEIIYDEKNNLY
KKLENISKKNNNI

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR006685
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 38518; Mature: 38518

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKLKLKFLMKIFALIIIAYFLGTYLNIYSYLLNLEKYYSNILVLIILFIGTMIFLDIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LELLRRFFEKKGELRDYPVVGSVFKYITWFTTILVAVSILYQGLGSLIMSLGLIGAGITF
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ALQRPIMNFAGWVNIVVTRPFKINDRINIKGVGMGDVYKIDTMHIYLSEVDMEPSGRNLV
HHHHHHHHHHCCEEEEEECCEEECCEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCEEE
IPNAFVLTNAIINYTKGSHYIWDSVEIAITYESNWKKAEKLVFEAADGIVGEDMRRLAKI
CCCHHHHHHHHHHHCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHH
WESRPRQFAKNKTNPKPMIRISLFENGIKIKVRYLVNSLEWALIKTQITQRILEKIGPEP
HHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DVNIAYPHMEIIYDEKNNLYKKLENISKKNNNI
CCEEECCCEEEEEECHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDNKLKLKFLMKIFALIIIAYFLGTYLNIYSYLLNLEKYYSNILVLIILFIGTMIFLDIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LELLRRFFEKKGELRDYPVVGSVFKYITWFTTILVAVSILYQGLGSLIMSLGLIGAGITF
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ALQRPIMNFAGWVNIVVTRPFKINDRINIKGVGMGDVYKIDTMHIYLSEVDMEPSGRNLV
HHHHHHHHHHCCEEEEEECCEEECCEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCEEE
IPNAFVLTNAIINYTKGSHYIWDSVEIAITYESNWKKAEKLVFEAADGIVGEDMRRLAKI
CCCHHHHHHHHHHHCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHH
WESRPRQFAKNKTNPKPMIRISLFENGIKIKVRYLVNSLEWALIKTQITQRILEKIGPEP
HHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DVNIAYPHMEIIYDEKNNLYKKLENISKKNNNI
CCEEECCCEEEEEECHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]