| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is wcaL [C]
Identifier: 150400863
GI number: 150400863
Start: 449923
End: 451065
Strand: Reverse
Name: wcaL [C]
Synonym: Maeo_0431
Alternate gene names: 150400863
Gene position: 451065-449923 (Counterclockwise)
Preceding gene: 150400864
Following gene: 150400862
Centisome position: 28.74
GC content: 30.01
Gene sequence:
>1143_bases ATGAATATATTAATAATTACAGAATATTTTCCTTCATCAGAAGAATGCAATGTTAAGGGAGGTGTTGAAGCGAGGGCATT TTATATAGCAAAAAATCTGGCTAAGAATCATAATGTATATGTTATAACATCTTGGGAGGAAGGATTATCTCAAAAGGATG AATTTTGTGGAATCAGTGTAATTCGGTGCGGAAAACAGAGGAAATACAGCCAAGGTGGAAGTTTCATCGAAAGGTTAAGT TTTATGAATGAAGCAGTAAAAACTGGAAAAAAGTTGGATGTTGATATCGTAGAGGGATACAATTTTATTACTTATCCCGT AGCATATAATATCTCAAAAAAGTTGAATATTCCGAGAGTGGCCACATATCATGATGTTTGGCTTGGTGGAGAGTGGATAA AAAACCTAGGATTCTTTGGAATATTTGGCGAGATACTGGAAAGATACATTCTCTCAAAAAAATGGGATAAATTTATTGCG GTAAGCAAATATACAAAGGAAAAATTGATAAAAGCAGGGGTTAAAGAAAAAAATATAGGCGTAGTTTATAATGGTGTTAA TTTGGAAGAATATCAAAAAATAAAAGTCCCTAAGGAAAAAAATACTTTATGTTATGTGGGAAGATTGGTTAAATATAAAA AAGTTGATGATTTGATTAAGTCAATAAATATTATTAAAACTGATTTTCCAGATGTAAAATTAAAAATTATTGGTACTGGT CCAGAAAAAGAAAATTTAGGGAAAATGATTAAAAGCCTACATTTGGAAAATAATATTGAATTTTTAGGATTTGTTGAGAA ACACGAGGATGTTCTAAAACATGTTAAATCTTCAACTATTTTTTCGCTACCAAGTATTGTTGAAGGATTTGGAATGGTGA CTATAGAAAGTGTTGCATCTGAAACACCTTATGTAAATTCTGCCATTCCCCCCACTGTTGAAATTACTGAAAATGGAAAA GGAGGGTTGTTATTTGAACCTGAAAATGTTGATGAATTATCATTAAAAATCAAAATGCTTTTAGAAGATAAAGATTTATA TTTTAAGAAACAAAAAGAATGTTTGGAACTTTCTAAAAAATATGATTGGAAAAAATTAACCCATGATGTGGAAAATATAT ATTTGGATATTTTAGGGGACTAG
Upstream 100 bases:
>100_bases ATGTTTGAAAAATTCATTGAGGGTAAATAATATACTGTTAAGGGCATATAATGTATCAAATATTATGAGTTATTAATAAA TATCAGGTATGGTGAAATTG
Downstream 100 bases:
>100_bases ACATGAGAATAGCAATGATTATAGAAGCATGGAAACCTATTTGGGGCGGCGGGCAAGCTGTTGCTTATGAAATAGGAAAA AGGTTAAGCAAAGATTATGA
Product: glycosyl transferase group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MNILIITEYFPSSEECNVKGGVEARAFYIAKNLAKNHNVYVITSWEEGLSQKDEFCGISVIRCGKQRKYSQGGSFIERLS FMNEAVKTGKKLDVDIVEGYNFITYPVAYNISKKLNIPRVATYHDVWLGGEWIKNLGFFGIFGEILERYILSKKWDKFIA VSKYTKEKLIKAGVKEKNIGVVYNGVNLEEYQKIKVPKEKNTLCYVGRLVKYKKVDDLIKSINIIKTDFPDVKLKIIGTG PEKENLGKMIKSLHLENNIEFLGFVEKHEDVLKHVKSSTIFSLPSIVEGFGMVTIESVASETPYVNSAIPPTVEITENGK GGLLFEPENVDELSLKIKMLLEDKDLYFKKQKECLELSKKYDWKKLTHDVENIYLDILGD
Sequences:
>Translated_380_residues MNILIITEYFPSSEECNVKGGVEARAFYIAKNLAKNHNVYVITSWEEGLSQKDEFCGISVIRCGKQRKYSQGGSFIERLS FMNEAVKTGKKLDVDIVEGYNFITYPVAYNISKKLNIPRVATYHDVWLGGEWIKNLGFFGIFGEILERYILSKKWDKFIA VSKYTKEKLIKAGVKEKNIGVVYNGVNLEEYQKIKVPKEKNTLCYVGRLVKYKKVDDLIKSINIIKTDFPDVKLKIIGTG PEKENLGKMIKSLHLENNIEFLGFVEKHEDVLKHVKSSTIFSLPSIVEGFGMVTIESVASETPYVNSAIPPTVEITENGK GGLLFEPENVDELSLKIKMLLEDKDLYFKKQKECLELSKKYDWKKLTHDVENIYLDILGD >Mature_380_residues MNILIITEYFPSSEECNVKGGVEARAFYIAKNLAKNHNVYVITSWEEGLSQKDEFCGISVIRCGKQRKYSQGGSFIERLS FMNEAVKTGKKLDVDIVEGYNFITYPVAYNISKKLNIPRVATYHDVWLGGEWIKNLGFFGIFGEILERYILSKKWDKFIA VSKYTKEKLIKAGVKEKNIGVVYNGVNLEEYQKIKVPKEKNTLCYVGRLVKYKKVDDLIKSINIIKTDFPDVKLKIIGTG PEKENLGKMIKSLHLENNIEFLGFVEKHEDVLKHVKSSTIFSLPSIVEGFGMVTIESVASETPYVNSAIPPTVEITENGK GGLLFEPENVDELSLKIKMLLEDKDLYFKKQKECLELSKKYDWKKLTHDVENIYLDILGD
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Escherichia coli, GI1788357, Length=199, Percent_Identity=26.6331658291457, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 43387; Mature: 43387
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILIITEYFPSSEECNVKGGVEARAFYIAKNLAKNHNVYVITSWEEGLSQKDEFCGISV CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHCCCCCHHHCCCHH IRCGKQRKYSQGGSFIERLSFMNEAVKTGKKLDVDIVEGYNFITYPVAYNISKKLNIPRV HHCCCHHCHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCHHCCCCCEE ATYHDVWLGGEWIKNLGFFGIFGEILERYILSKKWDKFIAVSKYTKEKLIKAGVKEKNIG EEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE VVYNGVNLEEYQKIKVPKEKNTLCYVGRLVKYKKVDDLIKSINIIKTDFPDVKLKIIGTG EEEECCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEECC PEKENLGKMIKSLHLENNIEFLGFVEKHEDVLKHVKSSTIFSLPSIVEGFGMVTIESVAS CCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEHHHHC ETPYVNSAIPPTVEITENGKGGLLFEPENVDELSLKIKMLLEDKDLYFKKQKECLELSKK CCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHC YDWKKLTHDVENIYLDILGD CCHHHHHHHHHHEEEEEECC >Mature Secondary Structure MNILIITEYFPSSEECNVKGGVEARAFYIAKNLAKNHNVYVITSWEEGLSQKDEFCGISV CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHCCCCCHHHCCCHH IRCGKQRKYSQGGSFIERLSFMNEAVKTGKKLDVDIVEGYNFITYPVAYNISKKLNIPRV HHCCCHHCHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCHHCCCCCEE ATYHDVWLGGEWIKNLGFFGIFGEILERYILSKKWDKFIAVSKYTKEKLIKAGVKEKNIG EEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE VVYNGVNLEEYQKIKVPKEKNTLCYVGRLVKYKKVDDLIKSINIIKTDFPDVKLKIIGTG EEEECCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEECC PEKENLGKMIKSLHLENNIEFLGFVEKHEDVLKHVKSSTIFSLPSIVEGFGMVTIESVAS CCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEHHHHC ETPYVNSAIPPTVEITENGKGGLLFEPENVDELSLKIKMLLEDKDLYFKKQKECLELSKK CCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHC YDWKKLTHDVENIYLDILGD CCHHHHHHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]