| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is wcaL [C]
Identifier: 150400492
GI number: 150400492
Start: 61344
End: 62438
Strand: Reverse
Name: wcaL [C]
Synonym: Maeo_0054
Alternate gene names: 150400492
Gene position: 62438-61344 (Counterclockwise)
Preceding gene: 150400493
Following gene: 150400491
Centisome position: 3.98
GC content: 26.03
Gene sequence:
>1095_bases ATGAAAATATTATTGCCCACAATATATCACCCATTTATCGGGGGAATAACTATACATATAGATAATTTAATAAAAAATTT AAATGATATTGATAGTAATTATGAATTTTATATTTTAAATTACAAATCAGATATGCCAAATAAAAATACAAATATTTCCC AAAATCTCGATTTAAATATAACAGTTATAGATGTGCCATATATTAAAAAAATTAGAGGATTATCCTATTTAAAACAAGGA TATAAAATTGGAAAAAATATAATAGAAAAACATAATATAGATTTAATACACCCCCATTATGCTTTCCCGCAAGGCGTATT GGGGGCAAAATTATCTAAAAAATATAATATACCAAATATATTAACTCTTCATGGAAGCGATGTTTTAAAACTTTCAAAAA ATCCAGTTGGAAATCTTTTTTTTAATTATTCTTTAAATAATACAGATAAATTAATATGTGTTAGTAATTTTTTAAAGCAG GAGCTCCCTGCCCAACATCAAAATAAATCAACGGTAATTTATAATGGTGTGGATTTTGATTTATTCAATACAGAAAATAA TAAAGACCACAATTACGGCATATTTGTAGGTTCTTTTGTTCCCCAGAAAGGACTAAATTTATTGGTTGATGTAATAAAAG ATATTGACTATAATTTTAAATTTATTGGTGATGGGCCGTTATTCAACAGTATAGAAAATAAAATTAAAAACGAAAATATA GGACATATCGAGCTATTGGGAAGGCAAAATCCGCAAATGGTGGCACAATATATAAAAAATAGTAGTTTTTTAATACTTCC ATCTATTTCAGAAGGTTTAGGTATGACCATCATTGAAGCCATGGCATGTGGAAAACCAGTAATTGGAACAAAAGTTGGAG GCATACCTGAATTAATAAAAAATAATTACAATGGATTTTTAATTGAACCAAATAACCCCGATGAATTAAAATTAAGAATA AAATTTCTAATTGATGAAACCAACGGTAAAAAATTAAGAAAAGAATTGGGAACAAATGGGGAAATATTTTCAAAATCGTT TGATTGGAAAAATACGGCAAAAGAAGTTCATAAATTATATAATTCTTTTAAATAA
Upstream 100 bases:
>100_bases AATATATAACTAAATATTTATAAATAAATATAAATAAATATAACTATACAATATTATATGATTGTTATATACATTATATA TCATACACTGGTGTAATTTA
Downstream 100 bases:
>100_bases TATGTGTGTATTTTAATAAATTGGATATAAAATATGTACATACCATAATTATAACAGGGATAAAATGATGACAGGTAACA CTTCGTTTATACCATTATAC
Product: glycosyl transferase group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKILLPTIYHPFIGGITIHIDNLIKNLNDIDSNYEFYILNYKSDMPNKNTNISQNLDLNITVIDVPYIKKIRGLSYLKQG YKIGKNIIEKHNIDLIHPHYAFPQGVLGAKLSKKYNIPNILTLHGSDVLKLSKNPVGNLFFNYSLNNTDKLICVSNFLKQ ELPAQHQNKSTVIYNGVDFDLFNTENNKDHNYGIFVGSFVPQKGLNLLVDVIKDIDYNFKFIGDGPLFNSIENKIKNENI GHIELLGRQNPQMVAQYIKNSSFLILPSISEGLGMTIIEAMACGKPVIGTKVGGIPELIKNNYNGFLIEPNNPDELKLRI KFLIDETNGKKLRKELGTNGEIFSKSFDWKNTAKEVHKLYNSFK
Sequences:
>Translated_364_residues MKILLPTIYHPFIGGITIHIDNLIKNLNDIDSNYEFYILNYKSDMPNKNTNISQNLDLNITVIDVPYIKKIRGLSYLKQG YKIGKNIIEKHNIDLIHPHYAFPQGVLGAKLSKKYNIPNILTLHGSDVLKLSKNPVGNLFFNYSLNNTDKLICVSNFLKQ ELPAQHQNKSTVIYNGVDFDLFNTENNKDHNYGIFVGSFVPQKGLNLLVDVIKDIDYNFKFIGDGPLFNSIENKIKNENI GHIELLGRQNPQMVAQYIKNSSFLILPSISEGLGMTIIEAMACGKPVIGTKVGGIPELIKNNYNGFLIEPNNPDELKLRI KFLIDETNGKKLRKELGTNGEIFSKSFDWKNTAKEVHKLYNSFK >Mature_364_residues MKILLPTIYHPFIGGITIHIDNLIKNLNDIDSNYEFYILNYKSDMPNKNTNISQNLDLNITVIDVPYIKKIRGLSYLKQG YKIGKNIIEKHNIDLIHPHYAFPQGVLGAKLSKKYNIPNILTLHGSDVLKLSKNPVGNLFFNYSLNNTDKLICVSNFLKQ ELPAQHQNKSTVIYNGVDFDLFNTENNKDHNYGIFVGSFVPQKGLNLLVDVIKDIDYNFKFIGDGPLFNSIENKIKNENI GHIELLGRQNPQMVAQYIKNSSFLILPSISEGLGMTIIEAMACGKPVIGTKVGGIPELIKNNYNGFLIEPNNPDELKLRI KFLIDETNGKKLRKELGTNGEIFSKSFDWKNTAKEVHKLYNSFK
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Homo sapiens, GI11863130, Length=373, Percent_Identity=23.0563002680965, Blast_Score=79, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17532709, Length=302, Percent_Identity=25.4966887417219, Blast_Score=88, Evalue=9e-18, Organism=Saccharomyces cerevisiae, GI9755344, Length=387, Percent_Identity=23.5142118863049, Blast_Score=96, Evalue=7e-21, Organism=Drosophila melanogaster, GI24654571, Length=324, Percent_Identity=24.0740740740741, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 41304; Mature: 41304
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILLPTIYHPFIGGITIHIDNLIKNLNDIDSNYEFYILNYKSDMPNKNTNISQNLDLNI CEEECCHHHHHHHCCEEEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEE TVIDVPYIKKIRGLSYLKQGYKIGKNIIEKHNIDLIHPHYAFPQGVLGAKLSKKYNIPNI EEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHCCCCCCEE LTLHGSDVLKLSKNPVGNLFFNYSLNNTDKLICVSNFLKQELPAQHQNKSTVIYNGVDFD EEECCCCEEEECCCCCCCEEEEEECCCCCCEEEHHHHHHHHCCCCCCCCCEEEEECCEEE LFNTENNKDHNYGIFVGSFVPQKGLNLLVDVIKDIDYNFKFIGDGPLFNSIENKIKNENI EECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCC GHIELLGRQNPQMVAQYIKNSSFLILPSISEGLGMTIIEAMACGKPVIGTKVGGIPELIK CEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHH NNYNGFLIEPNNPDELKLRIKFLIDETNGKKLRKELGTNGEIFSKSFDWKNTAKEVHKLY CCCCEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHH NSFK HCCC >Mature Secondary Structure MKILLPTIYHPFIGGITIHIDNLIKNLNDIDSNYEFYILNYKSDMPNKNTNISQNLDLNI CEEECCHHHHHHHCCEEEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEE TVIDVPYIKKIRGLSYLKQGYKIGKNIIEKHNIDLIHPHYAFPQGVLGAKLSKKYNIPNI EEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHCCCCCCEE LTLHGSDVLKLSKNPVGNLFFNYSLNNTDKLICVSNFLKQELPAQHQNKSTVIYNGVDFD EEECCCCEEEECCCCCCCEEEEEECCCCCCEEEHHHHHHHHCCCCCCCCCEEEEECCEEE LFNTENNKDHNYGIFVGSFVPQKGLNLLVDVIKDIDYNFKFIGDGPLFNSIENKIKNENI EECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCC GHIELLGRQNPQMVAQYIKNSSFLILPSISEGLGMTIIEAMACGKPVIGTKVGGIPELIK CEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHH NNYNGFLIEPNNPDELKLRIKFLIDETNGKKLRKELGTNGEIFSKSFDWKNTAKEVHKLY CCCCEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHH NSFK HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]