Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150400493

Identifier: 150400493

GI number: 150400493

Start: 62540

End: 63148

Strand: Reverse

Name: 150400493

Synonym: Maeo_0055

Alternate gene names: NA

Gene position: 63148-62540 (Counterclockwise)

Preceding gene: 150400494

Following gene: 150400492

Centisome position: 4.02

GC content: 30.71

Gene sequence:

>609_bases
ATGAAAAAAACCAACTATGGACATAAAAAGGATAAAAAACGAAAATTTGAAGATTATGCCTATATTTTGGATTATCTCGA
ATATGGGTATTCAGACGATATAAGGCCGGCACACCAAAAAAAACCATTGGCACAGGCATTTGGAGAAAAACAATTTGTAT
TAATGGAATTAATATTAAAAGATGATTGTCCAGTTGAATTGGCAGAAAGAGTTTATATTGGGAAAGATAAAAGAGATAAA
GTAGATTTCGTAGCAAAAATGATAAAATACGAAGAATTAACTCCAACGGCAAAAACAGAATTATTTTATGTCATCAAAGA
AGCAGTTAAAAGAAATGAGAATAGATTTGTAGAATTTATTAATAATTGCGGACCGATAACAAACAGAATGCATATGCTAC
AATTACTCCCTGGAATAGGTAAAACAGTAATGTGGAAAATAATTGAAGAAAGGGAGCTCCGACCATTTAAAACATTTGAA
GAAATAGAGGGGAGAGTTCATAGAAATGTAATGGATGCAATAGCAAGAAGAATAGAAGCCGAATTAAAAGAACCTCAAAA
ATATTATTTATTTGTAGAATGGAAAGAGCACCATTTGGATTACAATTAA

Upstream 100 bases:

>100_bases
CTCTACAAAGAGTTCTCGAACGGACTATATTTTAAGAAAATTACACTATTCAGTATTATAAAATAAATATTCCACTTTAA
TAAATTTAAATGGTGTCATT

Downstream 100 bases:

>100_bases
TAATATATAACTAAATATTTATAAATAAATATAAATAAATATAACTATACAATATTATATGATTGTTATATACATTATAT
ATCATACACTGGTGTAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKKTNYGHKKDKKRKFEDYAYILDYLEYGYSDDIRPAHQKKPLAQAFGEKQFVLMELILKDDCPVELAERVYIGKDKRDK
VDFVAKMIKYEELTPTAKTELFYVIKEAVKRNENRFVEFINNCGPITNRMHMLQLLPGIGKTVMWKIIEERELRPFKTFE
EIEGRVHRNVMDAIARRIEAELKEPQKYYLFVEWKEHHLDYN

Sequences:

>Translated_202_residues
MKKTNYGHKKDKKRKFEDYAYILDYLEYGYSDDIRPAHQKKPLAQAFGEKQFVLMELILKDDCPVELAERVYIGKDKRDK
VDFVAKMIKYEELTPTAKTELFYVIKEAVKRNENRFVEFINNCGPITNRMHMLQLLPGIGKTVMWKIIEERELRPFKTFE
EIEGRVHRNVMDAIARRIEAELKEPQKYYLFVEWKEHHLDYN
>Mature_202_residues
MKKTNYGHKKDKKRKFEDYAYILDYLEYGYSDDIRPAHQKKPLAQAFGEKQFVLMELILKDDCPVELAERVYIGKDKRDK
VDFVAKMIKYEELTPTAKTELFYVIKEAVKRNENRFVEFINNCGPITNRMHMLQLLPGIGKTVMWKIIEERELRPFKTFE
EIEGRVHRNVMDAIARRIEAELKEPQKYYLFVEWKEHHLDYN

Specific function: Unknown

COG id: COG1491

COG function: function code J; Predicted RNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007003
- InterPro:   IPR012340 [H]

Pfam domain/function: PF04919 DUF655 [H]

EC number: NA

Molecular weight: Translated: 24302; Mature: 24302

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTNYGHKKDKKRKFEDYAYILDYLEYGYSDDIRPAHQKKPLAQAFGEKQFVLMELILK
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCHHHHHHHHHC
DDCPVELAERVYIGKDKRDKVDFVAKMIKYEELTPTAKTELFYVIKEAVKRNENRFVEFI
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH
NNCGPITNRMHMLQLLPGIGKTVMWKIIEERELRPFKTFEEIEGRVHRNVMDAIARRIEA
HCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ELKEPQKYYLFVEWKEHHLDYN
HHCCCCEEEEEEEEECCCCCCC
>Mature Secondary Structure
MKKTNYGHKKDKKRKFEDYAYILDYLEYGYSDDIRPAHQKKPLAQAFGEKQFVLMELILK
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCHHHHHHHHHC
DDCPVELAERVYIGKDKRDKVDFVAKMIKYEELTPTAKTELFYVIKEAVKRNENRFVEFI
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH
NNCGPITNRMHMLQLLPGIGKTVMWKIIEERELRPFKTFEEIEGRVHRNVMDAIARRIEA
HCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ELKEPQKYYLFVEWKEHHLDYN
HHCCCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]