| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is 150400479
Identifier: 150400479
GI number: 150400479
Start: 45578
End: 46168
Strand: Direct
Name: 150400479
Synonym: Maeo_0041
Alternate gene names: NA
Gene position: 45578-46168 (Clockwise)
Preceding gene: 150400478
Following gene: 150400480
Centisome position: 2.9
GC content: 24.7
Gene sequence:
>591_bases ATGGATTATATTTTATTATTGTTAATTATATTGATGTTGCTTATGTCGGTAGTTTTATTTTATACTATTAACACATTTAA AAAAGTAAATAAATTGGTGCAACGAATAAATAAATTGATTATATCTAACATTGCCATTCGCAATAATGGCGACAATAAAG TAATAGAGATATTAAATGATGAAAAATATTATTATTTTGTTCTTAATCAAATATCAAATGCCGAAAAGGAGCTTAATATT GTAATGTTTTCAATATATCAATGTAAAAAAACACAGGAAATAATCGATGAAGTAATAAATGCTAGAAAAAGAGGAGTTAT GGTTAGGATAATTCTTGATGGAGAAATAGAATCAAATAAAATAGTAAATAAGTCATTTAGTAGTGAAAAAATACCTGTTA AATTAACAAAAACTCAACGGATACACAATAAATTAATAATCGTAGATGATAAATCAATAATAATTGGTAGTCATAATTGG ACTGATAAAGCACTTTTTGAGAATAGGGAGTCCAGCGTGGCAATCACTGATATAAATATAATAAATGAAGAAAAGGAATA TTTTGAATCTTTATGGAGCTCCATAAAATAA
Upstream 100 bases:
>100_bases GGTTTAGTGAAAAAGACCAAAGATTGACTATGGAAGATAATTTTAAATAAATATGTGCAACAAAACATATAAAGAGATAT TTAATTTTGAAGGTTATATT
Downstream 100 bases:
>100_bases ATAAAATAATTTCGATATTATAGTTAATCTTCGGTATTTTTCAGAAAATATACCATAATAAAGTAAATATATTATTACTA ACACTTAACATAAATAGGCG
Product: phospholipase D/transphosphatidylase
Products: NA
Alternate protein names: Phospholipase D-Related Protein; Phospholipase D Family Protein; Endonuclease
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MDYILLLLIILMLLMSVVLFYTINTFKKVNKLVQRINKLIISNIAIRNNGDNKVIEILNDEKYYYFVLNQISNAEKELNI VMFSIYQCKKTQEIIDEVINARKRGVMVRIILDGEIESNKIVNKSFSSEKIPVKLTKTQRIHNKLIIVDDKSIIIGSHNW TDKALFENRESSVAITDINIINEEKEYFESLWSSIK
Sequences:
>Translated_196_residues MDYILLLLIILMLLMSVVLFYTINTFKKVNKLVQRINKLIISNIAIRNNGDNKVIEILNDEKYYYFVLNQISNAEKELNI VMFSIYQCKKTQEIIDEVINARKRGVMVRIILDGEIESNKIVNKSFSSEKIPVKLTKTQRIHNKLIIVDDKSIIIGSHNW TDKALFENRESSVAITDINIINEEKEYFESLWSSIK >Mature_196_residues MDYILLLLIILMLLMSVVLFYTINTFKKVNKLVQRINKLIISNIAIRNNGDNKVIEILNDEKYYYFVLNQISNAEKELNI VMFSIYQCKKTQEIIDEVINARKRGVMVRIILDGEIESNKIVNKSFSSEKIPVKLTKTQRIHNKLIIVDDKSIIIGSHNW TDKALFENRESSVAITDINIINEEKEYFESLWSSIK
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22888; Mature: 22888
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYILLLLIILMLLMSVVLFYTINTFKKVNKLVQRINKLIISNIAIRNNGDNKVIEILND CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECC EKYYYFVLNQISNAEKELNIVMFSIYQCKKTQEIIDEVINARKRGVMVRIILDGEIESNK CEEEEEEEEHHCCHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCC IVNKSFSSEKIPVKLTKTQRIHNKLIIVDDKSIIIGSHNWTDKALFENRESSVAITDINI EECCCCCCCCCCEEEECHHHHHCEEEEEECCEEEEECCCCCHHHHHCCCCCCEEEEEEEE INEEKEYFESLWSSIK ECHHHHHHHHHHHHCC >Mature Secondary Structure MDYILLLLIILMLLMSVVLFYTINTFKKVNKLVQRINKLIISNIAIRNNGDNKVIEILND CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECC EKYYYFVLNQISNAEKELNIVMFSIYQCKKTQEIIDEVINARKRGVMVRIILDGEIESNK CEEEEEEEEHHCCHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCC IVNKSFSSEKIPVKLTKTQRIHNKLIIVDDKSIIIGSHNWTDKALFENRESSVAITDINI EECCCCCCCCCCEEEECHHHHHCEEEEEECCEEEEECCCCCHHHHHCCCCCCEEEEEEEE INEEKEYFESLWSSIK ECHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA