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The map label for this gene is cbiD

Identifier: 150400478

GI number: 150400478

Start: 44144

End: 45280

Strand: Direct

Name: cbiD

Synonym: Maeo_0040

Alternate gene names: 150400478

Gene position: 44144-45280 (Clockwise)

Preceding gene: 150400475

Following gene: 150400479

Centisome position: 2.81

GC content: 29.55

Gene sequence:

>1137_bases
ATGATATATGATTTCTTGAAAGAAAAAAAATTTGGATATACAACAGGTTCTTGTGTTGTAGCCGGTGCATACTGTGGAAT
ATATTATTTAAAACATAGTGTAAAATTAAATATCGTAGAATTGGAAAATTCAAAAAATGATAAATTAATAATTCCCATTG
AAGATGTAAAACTGGGTAAAATTGCAACCATCAAAAACATCAATAACACTGGCAAAATAAAGCCAAACAGGGCAACTACA
ATAGTTAAAAAGTTTTCAGGAGAAGACATTGACATCACAAATGGCATTGATATTGTAGTGGATGTGGAATTATTAAAAAT
GGAAAAAGATAAACCAAAAATAGAAATAGTAGGTGGAAATGGTGTAGGAATAGTTACAAAAGATGGATTACAGATAAAAA
AAGGAGAATATGCTATAAATCCAAAACCGCGAGAAATGATTAAAAATAATATTATAAATTTGCTTGATGACGATGAAAGG
GCAATAATAAAAATAACAATTCCAAAAGGGGAGGAATTAGCTAAAAAAACATTAAATCCAAAATTGGGAATAATTGGGGG
GATTTCCATATTGGGGACTACTGGAATAGTTAGACCCATGTCAAATGAAGCATATAAAGAATCACTTGCACCACAAATTG
ATGTAGCTCTTGCAAATAATTATAAAAAATTAATATTCACACCGGGAAATATTGGCACAAAGTACGCAAAAATAAAATAT
GGTGTAGATGATGACAATATTGTTGAAGTATCAAATTTTTGGAGTTTTATGCTCGATAAAGCTGTGGAAAAAGGAGTTAA
AGATATATTGATATTTGGACATTCTGGAAAAATTATAAAACTTGCAGGAGGCATATATGATACCCATTCAAAAGTTGCAG
ATGCTAGAAATGAAATATTGACGGCATATAGTTCTCCGTTTATTAATGATAAGCAGATTTTAAAAAATATATTATACAGC
AATACTACCGAAGAAATAGTTAAAATACTTGAAAAAGAAAATATATTGCATGAGGTATTTAATTTAATTGCTGAGCGAGT
AGTTGAGCGAGTAAGTAGTAGATGGGAAGGTATAAAATTCTCCTGTGTTATAATTGATATGAAAGGTGATATATTGGGAA
GCCATATTTATAGTTAA

Upstream 100 bases:

>100_bases
CACTATTGTTCGGAAATGCTACAAAATCCGAAGGATTTTGTTTAATCCCTTACGGAAGGGGACTTCTTATGGAATAAGTT
AAAAAACATATGGGCAAACT

Downstream 100 bases:

>100_bases
TCTTCAATAACTGTCCCTTATACGGCTTATTATTAAACAAAATCCTTCTAGGATTTTGTAAACAAATTTTCATTTATTGG
TAATATAGAGATTTTAGCTT

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MIYDFLKEKKFGYTTGSCVVAGAYCGIYYLKHSVKLNIVELENSKNDKLIIPIEDVKLGKIATIKNINNTGKIKPNRATT
IVKKFSGEDIDITNGIDIVVDVELLKMEKDKPKIEIVGGNGVGIVTKDGLQIKKGEYAINPKPREMIKNNIINLLDDDER
AIIKITIPKGEELAKKTLNPKLGIIGGISILGTTGIVRPMSNEAYKESLAPQIDVALANNYKKLIFTPGNIGTKYAKIKY
GVDDDNIVEVSNFWSFMLDKAVEKGVKDILIFGHSGKIIKLAGGIYDTHSKVADARNEILTAYSSPFINDKQILKNILYS
NTTEEIVKILEKENILHEVFNLIAERVVERVSSRWEGIKFSCVIIDMKGDILGSHIYS

Sequences:

>Translated_378_residues
MIYDFLKEKKFGYTTGSCVVAGAYCGIYYLKHSVKLNIVELENSKNDKLIIPIEDVKLGKIATIKNINNTGKIKPNRATT
IVKKFSGEDIDITNGIDIVVDVELLKMEKDKPKIEIVGGNGVGIVTKDGLQIKKGEYAINPKPREMIKNNIINLLDDDER
AIIKITIPKGEELAKKTLNPKLGIIGGISILGTTGIVRPMSNEAYKESLAPQIDVALANNYKKLIFTPGNIGTKYAKIKY
GVDDDNIVEVSNFWSFMLDKAVEKGVKDILIFGHSGKIIKLAGGIYDTHSKVADARNEILTAYSSPFINDKQILKNILYS
NTTEEIVKILEKENILHEVFNLIAERVVERVSSRWEGIKFSCVIIDMKGDILGSHIYS
>Mature_378_residues
MIYDFLKEKKFGYTTGSCVVAGAYCGIYYLKHSVKLNIVELENSKNDKLIIPIEDVKLGKIATIKNINNTGKIKPNRATT
IVKKFSGEDIDITNGIDIVVDVELLKMEKDKPKIEIVGGNGVGIVTKDGLQIKKGEYAINPKPREMIKNNIINLLDDDER
AIIKITIPKGEELAKKTLNPKLGIIGGISILGTTGIVRPMSNEAYKESLAPQIDVALANNYKKLIFTPGNIGTKYAKIKY
GVDDDNIVEVSNFWSFMLDKAVEKGVKDILIFGHSGKIIKLAGGIYDTHSKVADARNEILTAYSSPFINDKQILKNILYS
NTTEEIVKILEKENILHEVFNLIAERVVERVSSRWEGIKFSCVIIDMKGDILGSHIYS

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CBID_META3 (A6UT10)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001324244.1
- ProteinModelPortal:   A6UT10
- SMR:   A6UT10
- STRING:   A6UT10
- GeneID:   5327512
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0040
- eggNOG:   arNOG08460
- HOGENOM:   HBG705387
- OMA:   TTGIARP
- ProtClustDB:   PRK00075
- BioCyc:   MAEO419665:MAEO_0040-MONOMER
- HAMAP:   MF_00787
- InterPro:   IPR002748
- PIRSF:   PIRSF026782
- TIGRFAMs:   TIGR00312

Pfam domain/function: PF01888 CbiD; SSF111342 Cbl_biosynth_CbiD

EC number: NA

Molecular weight: Translated: 41991; Mature: 41991

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYDFLKEKKFGYTTGSCVVAGAYCGIYYLKHSVKLNIVELENSKNDKLIIPIEDVKLGK
CCCHHHHCCCCCCCCCCCEEHHHHHHHHEEEEEEEEEEEEECCCCCCEEEEEECCCCCCC
IATIKNINNTGKIKPNRATTIVKKFSGEDIDITNGIDIVVDVELLKMEKDKPKIEIVGGN
EEEEECCCCCCCCCCCHHHHHEECCCCCCEEECCCEEEEEEEEEEEECCCCCEEEEECCC
GVGIVTKDGLQIKKGEYAINPKPREMIKNNIINLLDDDERAIIKITIPKGEELAKKTLNP
EEEEEEECCEEEECCCEEECCCHHHHHHHCCCEEECCCCEEEEEEECCCCHHHHHHHCCC
KLGIIGGISILGTTGIVRPMSNEAYKESLAPQIDVALANNYKKLIFTPGNIGTKYAKIKY
CCEEEECHHEECCCCCCCCCCCHHHHHHCCCEEEEEEECCCEEEEECCCCCCCEEEEEEE
GVDDDNIVEVSNFWSFMLDKAVEKGVKDILIFGHSGKIIKLAGGIYDTHSKVADARNEIL
CCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHH
TAYSSPFINDKQILKNILYSNTTEEIVKILEKENILHEVFNLIAERVVERVSSRWEGIKF
HHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
SCVIIDMKGDILGSHIYS
EEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MIYDFLKEKKFGYTTGSCVVAGAYCGIYYLKHSVKLNIVELENSKNDKLIIPIEDVKLGK
CCCHHHHCCCCCCCCCCCEEHHHHHHHHEEEEEEEEEEEEECCCCCCEEEEEECCCCCCC
IATIKNINNTGKIKPNRATTIVKKFSGEDIDITNGIDIVVDVELLKMEKDKPKIEIVGGN
EEEEECCCCCCCCCCCHHHHHEECCCCCCEEECCCEEEEEEEEEEEECCCCCEEEEECCC
GVGIVTKDGLQIKKGEYAINPKPREMIKNNIINLLDDDERAIIKITIPKGEELAKKTLNP
EEEEEEECCEEEECCCEEECCCHHHHHHHCCCEEECCCCEEEEEEECCCCHHHHHHHCCC
KLGIIGGISILGTTGIVRPMSNEAYKESLAPQIDVALANNYKKLIFTPGNIGTKYAKIKY
CCEEEECHHEECCCCCCCCCCCHHHHHHCCCEEEEEEECCCEEEEECCCCCCCEEEEEEE
GVDDDNIVEVSNFWSFMLDKAVEKGVKDILIFGHSGKIIKLAGGIYDTHSKVADARNEIL
CCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHH
TAYSSPFINDKQILKNILYSNTTEEIVKILEKENILHEVFNLIAERVVERVSSRWEGIKF
HHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
SCVIIDMKGDILGSHIYS
EEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA