| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400455
Identifier: 150400455
GI number: 150400455
Start: 18343
End: 19161
Strand: Reverse
Name: 150400455
Synonym: Maeo_0016
Alternate gene names: NA
Gene position: 19161-18343 (Counterclockwise)
Preceding gene: 150400464
Following gene: 150400454
Centisome position: 1.22
GC content: 28.69
Gene sequence:
>819_bases ATGGATATTGCAGCTTATATTTCGGGATTTATTAATAAATATTATATTAATCCAATATATAATCAATCAGGATATACCAT TATTCAGGAAATTACCTATGGGATACTTCTTTTTGTAATGGTTTATATATTTTATAGGGCATGCAAATCCTTAAAAATAG AGATAGACAGCAAATTTGCACTAACTACGGTATTTTATGTAATTTTAATATCTCTACTAAGGTCAATGACTGATGCAGGA GTTTTGCCCCATACCTTTTATACGGTTACCCCCGGAATTGTTGTAGTTTTAGGGATATACTACATATTTTCAATAATATT AACAGGATACTTTTTCAAAGAAAAATACTACAAATATTCAATAATTATGGCAGTTTTACCAATGCTGTATTTTGGAGCCA TATTTTTAACAAATATTGTATATTTCGGAACGCTATTACAGATATTGTTAATAATTGCAATAATATACGGCATAATATCA TATCTATTAAATAATGTAGAATATATAAAAAATAAATTGAAATTTGATAAAATAGATAAATATGCAATATTGGGACAATT GACAGACGCATCAGCCACGGCCGTGGGTATAGCCTCCCATGGTTATTGGGAACAGCATCCAATTCCTCGGTTTTTTATGG ATACATTTGGAGCTTACAGCATGATACCTTTAAAATTAGCTTTGGTATTTTCTGTATTATATGTGCTAAATCATGAGGTA GATAATAAAAATTTAAGAAATATAATTAAAATAACAATAATGGCATTAGGATTTGCACCAGGACTTAGAAATTTATTTAG AATAGTTATGGGGGTTTAA
Upstream 100 bases:
>100_bases GTAGTTTGGGAGCTCCCCATAATTACGATAATACAATACGATAATTATATTAATTATAATTAAATATATTAAAATATATT AAAATAAAACTGGTGAGTAA
Downstream 100 bases:
>100_bases TTGAAGATATTACGCGAAGAAGTTCGAAGATTGACTATAAATAAAAAAATAAAAATAAAAATAAATAAAGTATTGCGATA AAATAAAACAGTAAAATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MDIAAYISGFINKYYINPIYNQSGYTIIQEITYGILLFVMVYIFYRACKSLKIEIDSKFALTTVFYVILISLLRSMTDAG VLPHTFYTVTPGIVVVLGIYYIFSIILTGYFFKEKYYKYSIIMAVLPMLYFGAIFLTNIVYFGTLLQILLIIAIIYGIIS YLLNNVEYIKNKLKFDKIDKYAILGQLTDASATAVGIASHGYWEQHPIPRFFMDTFGAYSMIPLKLALVFSVLYVLNHEV DNKNLRNIIKITIMALGFAPGLRNLFRIVMGV
Sequences:
>Translated_272_residues MDIAAYISGFINKYYINPIYNQSGYTIIQEITYGILLFVMVYIFYRACKSLKIEIDSKFALTTVFYVILISLLRSMTDAG VLPHTFYTVTPGIVVVLGIYYIFSIILTGYFFKEKYYKYSIIMAVLPMLYFGAIFLTNIVYFGTLLQILLIIAIIYGIIS YLLNNVEYIKNKLKFDKIDKYAILGQLTDASATAVGIASHGYWEQHPIPRFFMDTFGAYSMIPLKLALVFSVLYVLNHEV DNKNLRNIIKITIMALGFAPGLRNLFRIVMGV >Mature_272_residues MDIAAYISGFINKYYINPIYNQSGYTIIQEITYGILLFVMVYIFYRACKSLKIEIDSKFALTTVFYVILISLLRSMTDAG VLPHTFYTVTPGIVVVLGIYYIFSIILTGYFFKEKYYKYSIIMAVLPMLYFGAIFLTNIVYFGTLLQILLIIAIIYGIIS YLLNNVEYIKNKLKFDKIDKYAILGQLTDASATAVGIASHGYWEQHPIPRFFMDTFGAYSMIPLKLALVFSVLYVLNHEV DNKNLRNIIKITIMALGFAPGLRNLFRIVMGV
Specific function: Unknown
COG id: COG1967
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002749 [H]
Pfam domain/function: PF01889 DUF63 [H]
EC number: NA
Molecular weight: Translated: 31113; Mature: 31113
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIAAYISGFINKYYINPIYNQSGYTIIQEITYGILLFVMVYIFYRACKSLKIEIDSKFA CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHH LTTVFYVILISLLRSMTDAGVLPHTFYTVTPGIVVVLGIYYIFSIILTGYFFKEKYYKYS HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIMAVLPMLYFGAIFLTNIVYFGTLLQILLIIAIIYGIISYLLNNVEYIKNKLKFDKIDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAILGQLTDASATAVGIASHGYWEQHPIPRFFMDTFGAYSMIPLKLALVFSVLYVLNHEV HHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC DNKNLRNIIKITIMALGFAPGLRNLFRIVMGV CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MDIAAYISGFINKYYINPIYNQSGYTIIQEITYGILLFVMVYIFYRACKSLKIEIDSKFA CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHH LTTVFYVILISLLRSMTDAGVLPHTFYTVTPGIVVVLGIYYIFSIILTGYFFKEKYYKYS HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIMAVLPMLYFGAIFLTNIVYFGTLLQILLIIAIIYGIISYLLNNVEYIKNKLKFDKIDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAILGQLTDASATAVGIASHGYWEQHPIPRFFMDTFGAYSMIPLKLALVFSVLYVLNHEV HHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC DNKNLRNIIKITIMALGFAPGLRNLFRIVMGV CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]