| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is glgA [H]
Identifier: 150400446
GI number: 150400446
Start: 7231
End: 8811
Strand: Reverse
Name: glgA [H]
Synonym: Maeo_0007
Alternate gene names: 150400446
Gene position: 8811-7231 (Counterclockwise)
Preceding gene: 150400453
Following gene: 150400445
Centisome position: 0.56
GC content: 33.14
Gene sequence:
>1581_bases ATGAAGTTAGCCATATTAACGCCTACCATAGCACCATTAACTTCTATCGGTGGATTAGGAGATGTAATGAGAGATTTGCC AAAGTTTTTGAAAAGAAATGGAAATGATGTTATTATTATAACGCCAGACCACAATGGTAAAATCTCTAATTTACCACATG CAAAAACAGACAAATTAAAGACCAAATATAAGGGGATTGATTTTGAATTTGATGTTATAATCACAAAACACCCAACTACA AATATTGATATGGTGGTATTTAGCAACAAAGATTTCAATGCACTTGACACTTGGGACCCTTTGAAATATGATATATTTGC AGATTTGGTTGTGTCATATTTGGGTAAATATCCTGTGGATTGTGTTTCAGGACATGACTGGGCATGTGGTCTTGCAATAG CAAAATGTCATGAAAAACTCAATCTACCTACGACCATGACCATTCACAATGAAGCATTTAAAGGGCCAATTATAGAATAT AAAGGATTAGTCATGCCATTTTTGGAATTGGGTATTTATTTTAGTGATGCATTTAATACCGTGAGCCCAACACATGCCGA AGAAATAAAATTAATAGATTATATACACAATCAAAGTAAAATTAAGCCATATCATGGAATTATAAATGGTATTGATTTTG AAACATTTAATTCAACGACCATATTAAATAGGATGAATACATTATGCAACAATAAATTGGATCCAAAAAAATATGCTTTC ACCTGCGATTATGGGGCAGAAGATGCAAATATTATCAAACCTAAAATAAAATATGCATGGTTGGCAGATAGGGGGATATC CAAATATGTTGAAGCATGGAATGGAATGGATAAACAGTTAATATCTGGAACAGATGTTGAAATATATGGGGAATTAAATA ACAAACAAAAAGAGCGAAATGTTCCATTATTTGGAATTGTTGGTAGAGCAACTCATCAGAAAGGATTCGATATAACAATT GAAGCATTTTCCGAATTATTTGAGGAACATGATATCCAATTAGTAATACTTGCGAAAGGAGATGAACGAATAGAGAAAAA TTTGGCTGATTTTGCCGAATCATATAATGGAAATGTCATGGCACTAATTGGACACTGCATGCCATTATCTTCGATCATAT ATGCTAGTAGCGATTGGACAATTACACCTTCATTATGGGAGCCATGTGGATTAGTTCAAATGGAATCCATGGCACACTGC ACACCAGTAATCGCAAGAGAGGTGGGGGGATTAAAAGACTCCATAATTTCATTAAATCCAGACATATTAAATAACCCCAA TTTTCATGAAGCTACTGGAATTTTGTTTAAAAATTACGATAAAGTAGGATTAATGTGGGCTATTGGACATGCCTTAAATT GGACATATTATCGTATTGAAGAAGTATGCATGTTTTTAGAGTATAGTCATGGCAATTGCCCTAAAAGTCCATATGAAAAA GGTAGTCCTTTGAATAATATGATGAAAAATTGTTATAATCATGTATTTAAAAATTTGAGTTGGCAAAATAATGACAGTGC AGATAAATATAAGGCACTATTTGGAGGTGCAATTTATACCCACACATATGGCAAGATATGA
Upstream 100 bases:
>100_bases ATTTATAAATGTATATATTATATATACCATCAATACAAAATATTATAATTAATAGTATTATAATTATGGTTATTATATAT GTCATTATGTGGAGGATATT
Downstream 100 bases:
>100_bases GGTATAAATTATATAGTGTATAGATATGAAAATTTAAAGGATTTTATATGTGGTCTGTTCGAGAACTTTTTACATCAAAT AATTAATGATATATAATTAA
Product: glycosyl transferase group 1
Products: NA
Alternate protein names: Starch [bacterial glycogen] synthase [H]
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MKLAILTPTIAPLTSIGGLGDVMRDLPKFLKRNGNDVIIITPDHNGKISNLPHAKTDKLKTKYKGIDFEFDVIITKHPTT NIDMVVFSNKDFNALDTWDPLKYDIFADLVVSYLGKYPVDCVSGHDWACGLAIAKCHEKLNLPTTMTIHNEAFKGPIIEY KGLVMPFLELGIYFSDAFNTVSPTHAEEIKLIDYIHNQSKIKPYHGIINGIDFETFNSTTILNRMNTLCNNKLDPKKYAF TCDYGAEDANIIKPKIKYAWLADRGISKYVEAWNGMDKQLISGTDVEIYGELNNKQKERNVPLFGIVGRATHQKGFDITI EAFSELFEEHDIQLVILAKGDERIEKNLADFAESYNGNVMALIGHCMPLSSIIYASSDWTITPSLWEPCGLVQMESMAHC TPVIAREVGGLKDSIISLNPDILNNPNFHEATGILFKNYDKVGLMWAIGHALNWTYYRIEEVCMFLEYSHGNCPKSPYEK GSPLNNMMKNCYNHVFKNLSWQNNDSADKYKALFGGAIYTHTYGKI
Sequences:
>Translated_526_residues MKLAILTPTIAPLTSIGGLGDVMRDLPKFLKRNGNDVIIITPDHNGKISNLPHAKTDKLKTKYKGIDFEFDVIITKHPTT NIDMVVFSNKDFNALDTWDPLKYDIFADLVVSYLGKYPVDCVSGHDWACGLAIAKCHEKLNLPTTMTIHNEAFKGPIIEY KGLVMPFLELGIYFSDAFNTVSPTHAEEIKLIDYIHNQSKIKPYHGIINGIDFETFNSTTILNRMNTLCNNKLDPKKYAF TCDYGAEDANIIKPKIKYAWLADRGISKYVEAWNGMDKQLISGTDVEIYGELNNKQKERNVPLFGIVGRATHQKGFDITI EAFSELFEEHDIQLVILAKGDERIEKNLADFAESYNGNVMALIGHCMPLSSIIYASSDWTITPSLWEPCGLVQMESMAHC TPVIAREVGGLKDSIISLNPDILNNPNFHEATGILFKNYDKVGLMWAIGHALNWTYYRIEEVCMFLEYSHGNCPKSPYEK GSPLNNMMKNCYNHVFKNLSWQNNDSADKYKALFGGAIYTHTYGKI >Mature_526_residues MKLAILTPTIAPLTSIGGLGDVMRDLPKFLKRNGNDVIIITPDHNGKISNLPHAKTDKLKTKYKGIDFEFDVIITKHPTT NIDMVVFSNKDFNALDTWDPLKYDIFADLVVSYLGKYPVDCVSGHDWACGLAIAKCHEKLNLPTTMTIHNEAFKGPIIEY KGLVMPFLELGIYFSDAFNTVSPTHAEEIKLIDYIHNQSKIKPYHGIINGIDFETFNSTTILNRMNTLCNNKLDPKKYAF TCDYGAEDANIIKPKIKYAWLADRGISKYVEAWNGMDKQLISGTDVEIYGELNNKQKERNVPLFGIVGRATHQKGFDITI EAFSELFEEHDIQLVILAKGDERIEKNLADFAESYNGNVMALIGHCMPLSSIIYASSDWTITPSLWEPCGLVQMESMAHC TPVIAREVGGLKDSIISLNPDILNNPNFHEATGILFKNYDKVGLMWAIGHALNWTYYRIEEVCMFLEYSHGNCPKSPYEK GSPLNNMMKNCYNHVFKNLSWQNNDSADKYKALFGGAIYTHTYGKI
Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]
COG id: COG0297
COG function: function code G; Glycogen synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789836, Length=531, Percent_Identity=23.5404896421846, Blast_Score=117, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011835 - InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.21 [H]
Molecular weight: Translated: 59330; Mature: 59330
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAILTPTIAPLTSIGGLGDVMRDLPKFLKRNGNDVIIITPDHNGKISNLPHAKTDKLK CEEEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHH TKYKGIDFEFDVIITKHPTTNIDMVVFSNKDFNALDTWDPLKYDIFADLVVSYLGKYPVD HHHCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC CVSGHDWACGLAIAKCHEKLNLPTTMTIHNEAFKGPIIEYKGLVMPFLELGIYFSDAFNT CCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCHHCCHHHHHHHHHHHHHCCCCC VSPTHAEEIKLIDYIHNQSKIKPYHGIINGIDFETFNSTTILNRMNTLCNNKLDPKKYAF CCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEE TCDYGAEDANIIKPKIKYAWLADRGISKYVEAWNGMDKQLISGTDVEIYGELNNKQKERN EECCCCCCCCEECCCEEEEEEHHCCHHHHHHHHCCCCHHHHCCCCEEEEECCCCCHHHCC VPLFGIVGRATHQKGFDITIEAFSELFEEHDIQLVILAKGDERIEKNLADFAESYNGNVM CCEEEEECCCCCCCCCEEEHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEE ALIGHCMPLSSIIYASSDWTITPSLWEPCGLVQMESMAHCTPVIAREVGGLKDSIISLNP EEEHHHCCHHHHEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHEECCC DILNNPNFHEATGILFKNYDKVGLMWAIGHALNWTYYRIEEVCMFLEYSHGNCPKSPYEK CCCCCCCCHHHHCCEEECCCCHHHHEEHHHHHCCHHHHHHHHHHHHEECCCCCCCCCCCC GSPLNNMMKNCYNHVFKNLSWQNNDSADKYKALFGGAIYTHTYGKI CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEEEEECCCCC >Mature Secondary Structure MKLAILTPTIAPLTSIGGLGDVMRDLPKFLKRNGNDVIIITPDHNGKISNLPHAKTDKLK CEEEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHH TKYKGIDFEFDVIITKHPTTNIDMVVFSNKDFNALDTWDPLKYDIFADLVVSYLGKYPVD HHHCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC CVSGHDWACGLAIAKCHEKLNLPTTMTIHNEAFKGPIIEYKGLVMPFLELGIYFSDAFNT CCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCHHCCHHHHHHHHHHHHHCCCCC VSPTHAEEIKLIDYIHNQSKIKPYHGIINGIDFETFNSTTILNRMNTLCNNKLDPKKYAF CCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEE TCDYGAEDANIIKPKIKYAWLADRGISKYVEAWNGMDKQLISGTDVEIYGELNNKQKERN EECCCCCCCCEECCCEEEEEEHHCCHHHHHHHHCCCCHHHHCCCCEEEEECCCCCHHHCC VPLFGIVGRATHQKGFDITIEAFSELFEEHDIQLVILAKGDERIEKNLADFAESYNGNVM CCEEEEECCCCCCCCCEEEHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEE ALIGHCMPLSSIIYASSDWTITPSLWEPCGLVQMESMAHCTPVIAREVGGLKDSIISLNP EEEHHHCCHHHHEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHEECCC DILNNPNFHEATGILFKNYDKVGLMWAIGHALNWTYYRIEEVCMFLEYSHGNCPKSPYEK CCCCCCCCHHHHCCEEECCCCHHHHEEHHHHHCCHHHHHHHHHHHHEECCCCCCCCCCCC GSPLNNMMKNCYNHVFKNLSWQNNDSADKYKALFGGAIYTHTYGKI CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]