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The map label for this gene is yigC [C]

Identifier: 150400453

GI number: 150400453

Start: 16197

End: 17474

Strand: Reverse

Name: yigC [C]

Synonym: Maeo_0014

Alternate gene names: 150400453

Gene position: 17474-16197 (Counterclockwise)

Preceding gene: 150400454

Following gene: 150400446

Centisome position: 1.11

GC content: 32.94

Gene sequence:

>1278_bases
ATGATAAGAGATTTAATTAACTCAATAGATAATTTAAAAGTAGTAGAAAAAGCCAACAAAAAATTTGAAATTACAAAAAT
ATTGGCTGAAAATGATGGAGCTCCGACTTATATAAAAGATGTAAATGGATATGAAGTAATAGGAAATTTATGCAACAGGG
AAATAATAGCAAAAAGTTTAGGTATCGAAGTAAGCGACTTAGTAGAATATATGATAAATGCCCTAGATAATGAAAAAAAT
GGGGAATTAATTGTTGATAACGAATTAAAAAAAGAATATGTATCTGATGAAGTAAGCAAAATAAGTCAATACCCAATACC
TACTTACTATGAAAAAGATGCGGGGGCTTATTTAACCTCAGGCATAGTAATTGTAAAAGATAAAGACCATGGCATAAATT
CCTCAATTCACAGAATTTTAGTAAAAGATGGCAAATTAATAATTAGAATGGTTGAACAAAGACATTTACACTACATATAC
AACAAAAATATCAAAGATGGAGAGGTAGATGTAGCAATAGTAATAGGAGTGCATCCTGCCCTATTGTTGGCATCCTCTAC
ATCGGGAGATGTTACATTTAATGAATTAAAATATGCCTCTGCACTAATGGGAGCTCCCTTAAAATTGATAAAATGTGATA
CTGTTGATTTGGAAGTTCCAGCAGGGGAATTTATTATCGAAGGAAAAATAACAAATAAAATGGAAGAAGAAGGACCTTTC
GTAGATATTACTGGAACATACGATACAATTAGACAGCAACCAGTAATAGAAATAACAGCTTTAAAAAGAAAAAAAGAACC
AATATTCCATGCCCTTCTCCCAGGGGGAATAGAACATAAAATTTTAATGGGATTGCCACAAGAGCCACGAATGTATAAAG
GAATTAGAAACACAGTTCCATCAGTTAAACAGGTTTCACTAACAGAAGGAGGATGTTGTTGGCTTCATGCCGTTGTATCT
ATCGAAAAGAAAACCGAAGGAGATGGTAAAAATGCCATACTTGCGGCACTTGCATCACATCCAAGTTTAAAACATGTTGT
GATTGTTGATGATGACATAAACATACACAACCCCAGTGATGTAGAATTTGCCATAGCTACACGAGTTCAGGCCGATAAAG
ATGTGGTAATTATAAGTGATACAAAAGGTTCTTCATTAGACCCATCAGGAGACCATAAAAATAAATTAACGGCAAAAATG
GGAATAGATGCCACCATAAGTTTAAGAAAAGGAAATAAAGAAGAATACATTAGGGCAGAAATACCAGATATAAAATAA

Upstream 100 bases:

>100_bases
AATTTGTAAAATCCTCGATAAAATAATAAAAAATAAAATTAATAAAAAATAAAATATGACAGCAGTAAATAAAATAATAA
CAAATATAGAGGTATAAAAT

Downstream 100 bases:

>100_bases
TATAATTAATATAATATACCATTAAATATTATTTTTAAAAAAAAATATAACAAAAATAAAATATAATAAAAATAAAAAAA
GAAATTAATTTAATTTTTTA

Product: UbiD family decarboxylase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MIRDLINSIDNLKVVEKANKKFEITKILAENDGAPTYIKDVNGYEVIGNLCNREIIAKSLGIEVSDLVEYMINALDNEKN
GELIVDNELKKEYVSDEVSKISQYPIPTYYEKDAGAYLTSGIVIVKDKDHGINSSIHRILVKDGKLIIRMVEQRHLHYIY
NKNIKDGEVDVAIVIGVHPALLLASSTSGDVTFNELKYASALMGAPLKLIKCDTVDLEVPAGEFIIEGKITNKMEEEGPF
VDITGTYDTIRQQPVIEITALKRKKEPIFHALLPGGIEHKILMGLPQEPRMYKGIRNTVPSVKQVSLTEGGCCWLHAVVS
IEKKTEGDGKNAILAALASHPSLKHVVIVDDDINIHNPSDVEFAIATRVQADKDVVIISDTKGSSLDPSGDHKNKLTAKM
GIDATISLRKGNKEEYIRAEIPDIK

Sequences:

>Translated_425_residues
MIRDLINSIDNLKVVEKANKKFEITKILAENDGAPTYIKDVNGYEVIGNLCNREIIAKSLGIEVSDLVEYMINALDNEKN
GELIVDNELKKEYVSDEVSKISQYPIPTYYEKDAGAYLTSGIVIVKDKDHGINSSIHRILVKDGKLIIRMVEQRHLHYIY
NKNIKDGEVDVAIVIGVHPALLLASSTSGDVTFNELKYASALMGAPLKLIKCDTVDLEVPAGEFIIEGKITNKMEEEGPF
VDITGTYDTIRQQPVIEITALKRKKEPIFHALLPGGIEHKILMGLPQEPRMYKGIRNTVPSVKQVSLTEGGCCWLHAVVS
IEKKTEGDGKNAILAALASHPSLKHVVIVDDDINIHNPSDVEFAIATRVQADKDVVIISDTKGSSLDPSGDHKNKLTAKM
GIDATISLRKGNKEEYIRAEIPDIK
>Mature_425_residues
MIRDLINSIDNLKVVEKANKKFEITKILAENDGAPTYIKDVNGYEVIGNLCNREIIAKSLGIEVSDLVEYMINALDNEKN
GELIVDNELKKEYVSDEVSKISQYPIPTYYEKDAGAYLTSGIVIVKDKDHGINSSIHRILVKDGKLIIRMVEQRHLHYIY
NKNIKDGEVDVAIVIGVHPALLLASSTSGDVTFNELKYASALMGAPLKLIKCDTVDLEVPAGEFIIEGKITNKMEEEGPF
VDITGTYDTIRQQPVIEITALKRKKEPIFHALLPGGIEHKILMGLPQEPRMYKGIRNTVPSVKQVSLTEGGCCWLHAVVS
IEKKTEGDGKNAILAALASHPSLKHVVIVDDDINIHNPSDVEFAIATRVQADKDVVIISDTKGSSLDPSGDHKNKLTAKM
GIDATISLRKGNKEEYIRAEIPDIK

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=340, Percent_Identity=28.5294117647059, Blast_Score=128, Evalue=6e-31,
Organism=Saccharomyces cerevisiae, GI6320748, Length=373, Percent_Identity=24.9329758713137, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 46957; Mature: 46957

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRDLINSIDNLKVVEKANKKFEITKILAENDGAPTYIKDVNGYEVIGNLCNREIIAKSL
CHHHHHHHHHCEEHHHHCCCEEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHH
GIEVSDLVEYMINALDNEKNGELIVDNELKKEYVSDEVSKISQYPIPTYYEKDAGAYLTS
CCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCEEECCCCCEECC
GIVIVKDKDHGINSSIHRILVKDGKLIIRMVEQRHLHYIYNKNIKDGEVDVAIVIGVHPA
CEEEEECCCCCCCHHHHEEEECCCHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEECCCE
LLLASSTSGDVTFNELKYASALMGAPLKLIKCDTVDLEVPAGEFIIEGKITNKMEEEGPF
EEEEECCCCCEEHHHHHHHHHHHCCCEEEEEECEEEEECCCCCEEEECCCCCCHHHCCCE
VDITGTYDTIRQQPVIEITALKRKKEPIFHALLPGGIEHKILMGLPQEPRMYKGIRNTVP
EEEECCHHHHCCCCCEEEEEHHCCCCCHHEECCCCCCCCEEEECCCCCCHHHHHHHHCCC
SVKQVSLTEGGCCWLHAVVSIEKKTEGDGKNAILAALASHPSLKHVVIVDDDINIHNPSD
CCEEEECCCCCCEEEEEEEEEECCCCCCCCHHHHEEECCCCCEEEEEEEECCCCCCCCCC
VEFAIATRVQADKDVVIISDTKGSSLDPSGDHKNKLTAKMGIDATISLRKGNKEEYIRAE
CEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEC
IPDIK
CCCCC
>Mature Secondary Structure
MIRDLINSIDNLKVVEKANKKFEITKILAENDGAPTYIKDVNGYEVIGNLCNREIIAKSL
CHHHHHHHHHCEEHHHHCCCEEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHH
GIEVSDLVEYMINALDNEKNGELIVDNELKKEYVSDEVSKISQYPIPTYYEKDAGAYLTS
CCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCEEECCCCCEECC
GIVIVKDKDHGINSSIHRILVKDGKLIIRMVEQRHLHYIYNKNIKDGEVDVAIVIGVHPA
CEEEEECCCCCCCHHHHEEEECCCHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEECCCE
LLLASSTSGDVTFNELKYASALMGAPLKLIKCDTVDLEVPAGEFIIEGKITNKMEEEGPF
EEEEECCCCCEEHHHHHHHHHHHCCCEEEEEECEEEEECCCCCEEEECCCCCCHHHCCCE
VDITGTYDTIRQQPVIEITALKRKKEPIFHALLPGGIEHKILMGLPQEPRMYKGIRNTVP
EEEECCHHHHCCCCCEEEEEHHCCCCCHHEECCCCCCCCEEEECCCCCCHHHHHHHHCCC
SVKQVSLTEGGCCWLHAVVSIEKKTEGDGKNAILAALASHPSLKHVVIVDDDINIHNPSD
CCEEEECCCCCCEEEEEEEEEECCCCCCCCHHHHEEECCCCCEEEEEEEECCCCCCCCCC
VEFAIATRVQADKDVVIISDTKGSSLDPSGDHKNKLTAKMGIDATISLRKGNKEEYIRAE
CEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEC
IPDIK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]