| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is bepIM [H]
Identifier: 150400370
GI number: 150400370
Start: 1651035
End: 1652141
Strand: Reverse
Name: bepIM [H]
Synonym: Mevan_1633
Alternate gene names: 150400370
Gene position: 1652141-1651035 (Counterclockwise)
Preceding gene: 150400371
Following gene: 150400365
Centisome position: 96.05
GC content: 33.24
Gene sequence:
>1107_bases ATGAAAAAATCCCATGAAATACATAAAAATCAAGGCAAATTAATAAGTACAGAAAATATTAAATTAGTTGACACTATGAA ACCCATTAACTATGCCAAAAAATTTAAAGTTATTTCGTTATTTAGTGGTTGTGGTGGAATGGATTTGGGTTTTAAAGGCG GTTTTGAAATATTTAAACAACATTATGAACATAACCCCTATGAAATAATATTTTCTAATGATATATCGGATAAAGCATGC AGAACTTATGAAAGTAATTTTTGCCATTCTTCAGTTTGTGCAGACATAAAGGATATAAAAAATGAAGATATCCCTAATGC AGACATTGTAATAGGGGGATTCCCTTGCCAAGATTTTAGTCATGCTGGAAAAAGAAAAGGACTTTCTGCTGAAAGAGGTA GACTTTACTTAGAAATGAAAAGAGTAATTGATTATATTAAACCTATTGCTTTTGTAGCTGAAAATGTAGACGGAATTAGA ACGAATTCTAAAGGAAAAGATACTACTGCCTTAGACATTATCCTAAAAGATTTTATGGACTCGGGCTACCAAGTAGCCTA TAAAGTACTTAATACTGCAGATTATGGAGTACCCCAAACTAGAATAAGGGTAATAATAATGGGCATCAGGAATGATTATG TTGGGGACATAATGTATCCTAAACCCGTTAGGGGTAATGAAGGACTTTTTGAATGGATGACGTCAAAAGAAGCCATTGAC GATTTATGGGATAAAATAGACTCAAAAGAGGTATTTAATCATTCTTCAAAAGATTATTCTAAAGCTAAATTTTACCCCGG TAAAAAAATGCAAGGTAATTATAAAATATTGGCAGATCGCCCCTCAATCACAATACGGGCTGAACATCATGGAAACATCG AAGCCCACTATAGGTCATATAATAATGAAGATCCTGAAGATATGGGGTATTGGAGAAGATTAAGTGTTAGAGAATGTGCA AGATTGCAGTCGTTTCCGGATGATTTTAATTTTCCATTTTCTGCATCTGAAGCATATAAACAAATTGGTAATGCTGTTCC ACCGATACTAGGGTGGCATATTGCAAGGGCATTGTACCATACTTTGACGAAAAATAAAAAAAGCTAA
Upstream 100 bases:
>100_bases AAGAAAGGAAAAAATGATTAAAAATATTCAAAAAATATTATAATTAAAATGTACTATACAGTAATGAGCATATTTAGAAT AATTTTTGGTGAATAATTTG
Downstream 100 bases:
>100_bases TTTAATATTTTTTTTCATAAATATCTGATAAATCCGTATTCCTTCCATAATACATTTTTGCTTCGGGTGTTCCATTGAAT TGACCGTGGCTAAATCTACA
Product: DNA-cytosine methyltransferase
Products: NA
Alternate protein names: M.BepI; Cytosine-specific methyltransferase BepI [H]
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MKKSHEIHKNQGKLISTENIKLVDTMKPINYAKKFKVISLFSGCGGMDLGFKGGFEIFKQHYEHNPYEIIFSNDISDKAC RTYESNFCHSSVCADIKDIKNEDIPNADIVIGGFPCQDFSHAGKRKGLSAERGRLYLEMKRVIDYIKPIAFVAENVDGIR TNSKGKDTTALDIILKDFMDSGYQVAYKVLNTADYGVPQTRIRVIIMGIRNDYVGDIMYPKPVRGNEGLFEWMTSKEAID DLWDKIDSKEVFNHSSKDYSKAKFYPGKKMQGNYKILADRPSITIRAEHHGNIEAHYRSYNNEDPEDMGYWRRLSVRECA RLQSFPDDFNFPFSASEAYKQIGNAVPPILGWHIARALYHTLTKNKKS
Sequences:
>Translated_368_residues MKKSHEIHKNQGKLISTENIKLVDTMKPINYAKKFKVISLFSGCGGMDLGFKGGFEIFKQHYEHNPYEIIFSNDISDKAC RTYESNFCHSSVCADIKDIKNEDIPNADIVIGGFPCQDFSHAGKRKGLSAERGRLYLEMKRVIDYIKPIAFVAENVDGIR TNSKGKDTTALDIILKDFMDSGYQVAYKVLNTADYGVPQTRIRVIIMGIRNDYVGDIMYPKPVRGNEGLFEWMTSKEAID DLWDKIDSKEVFNHSSKDYSKAKFYPGKKMQGNYKILADRPSITIRAEHHGNIEAHYRSYNNEDPEDMGYWRRLSVRECA RLQSFPDDFNFPFSASEAYKQIGNAVPPILGWHIARALYHTLTKNKKS >Mature_368_residues MKKSHEIHKNQGKLISTENIKLVDTMKPINYAKKFKVISLFSGCGGMDLGFKGGFEIFKQHYEHNPYEIIFSNDISDKAC RTYESNFCHSSVCADIKDIKNEDIPNADIVIGGFPCQDFSHAGKRKGLSAERGRLYLEMKRVIDYIKPIAFVAENVDGIR TNSKGKDTTALDIILKDFMDSGYQVAYKVLNTADYGVPQTRIRVIIMGIRNDYVGDIMYPKPVRGNEGLFEWMTSKEAID DLWDKIDSKEVFNHSSKDYSKAKFYPGKKMQGNYKILADRPSITIRAEHHGNIEAHYRSYNNEDPEDMGYWRRLSVRECA RLQSFPDDFNFPFSASEAYKQIGNAVPPILGWHIARALYHTLTKNKKS
Specific function: This methylase recognizes the double-stranded sequence CGCG, causes specific methylation on C-1 on both strands, and protects the DNA from cleavage by the BepI endonuclease [H]
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C5-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788271, Length=383, Percent_Identity=27.154046997389, Blast_Score=97, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018117 - InterPro: IPR001525 [H]
Pfam domain/function: PF00145 DNA_methylase [H]
EC number: =2.1.1.37 [H]
Molecular weight: Translated: 42105; Mature: 42105
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS00094 C5_MTASE_1 ; PS00095 C5_MTASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSHEIHKNQGKLISTENIKLVDTMKPINYAKKFKVISLFSGCGGMDLGFKGGFEIFKQ CCCCCCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH HYEHNPYEIIFSNDISDKACRTYESNFCHSSVCADIKDIKNEDIPNADIVIGGFPCQDFS HHCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHH HAGKRKGLSAERGRLYLEMKRVIDYIKPIAFVAENVDGIRTNSKGKDTTALDIILKDFMD HHHHHCCCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHC SGYQVAYKVLNTADYGVPQTRIRVIIMGIRNDYVGDIMYPKPVRGNEGLFEWMTSKEAID CCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH DLWDKIDSKEVFNHSSKDYSKAKFYPGKKMQGNYKILADRPSITIRAEHHGNIEAHYRSY HHHHHCCHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEECCC NNEDPEDMGYWRRLSVRECARLQSFPDDFNFPFSASEAYKQIGNAVPPILGWHIARALYH CCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH TLTKNKKS HHHCCCCC >Mature Secondary Structure MKKSHEIHKNQGKLISTENIKLVDTMKPINYAKKFKVISLFSGCGGMDLGFKGGFEIFKQ CCCCCCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH HYEHNPYEIIFSNDISDKACRTYESNFCHSSVCADIKDIKNEDIPNADIVIGGFPCQDFS HHCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHH HAGKRKGLSAERGRLYLEMKRVIDYIKPIAFVAENVDGIRTNSKGKDTTALDIILKDFMD HHHHHCCCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHC SGYQVAYKVLNTADYGVPQTRIRVIIMGIRNDYVGDIMYPKPVRGNEGLFEWMTSKEAID CCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH DLWDKIDSKEVFNHSSKDYSKAKFYPGKKMQGNYKILADRPSITIRAEHHGNIEAHYRSY HHHHHCCHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEECCC NNEDPEDMGYWRRLSVRECARLQSFPDDFNFPFSASEAYKQIGNAVPPILGWHIARALYH CCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH TLTKNKKS HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2784204 [H]