| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150400120
Identifier: 150400120
GI number: 150400120
Start: 1408120
End: 1409268
Strand: Reverse
Name: 150400120
Synonym: Mevan_1378
Alternate gene names: NA
Gene position: 1409268-1408120 (Counterclockwise)
Preceding gene: 150400121
Following gene: 150400119
Centisome position: 81.93
GC content: 36.73
Gene sequence:
>1149_bases ATGAAACAGATGGATACTGAAAAGCTTTTGATGATTCCTGGCCCAACTGTCGTTCCGACCAGGGTATTAAACGTAATGGC ATTACCAATTATAGGCCATAGAACAAAAGATTTTGGGGAACTTACGGAAGATACTGTTGACAAAATGAAGCAGGTATTTC AAACTAAGAACGAATCATACATCGTTACAGGTTCAGGAACTGCTGTAATGGATATGGCAATTGCAAACACTGTTGATAAG GGCGATAAAGTATTAAACATTGTAAACGGTGCTTTTGGAGATAGGTTTTATAAAATTTCATCAGTTTATAAGGCTGATGC AATAAAGCTTGAAAACGAATGGGGAGATTTAGCTGACCCTAATGCAGTAAAAGAAATTTTAGATGAAAATGAAGATATTA AAGCTGTAACAATAGTTCATAACGAAACTTCAAGCGGTGCTAAAAACCCTATTGAAGAAATTGGAAACGTCGTAAAAGAC TATAACGCCCTATACATTGTAGACACCATTTCTTCACTTGGTGGGGACTATGTTCACGTTGATAAATTCAATATAGACAT CTGTGTAACTGGCTCACAAAAGTGTATTGCAGCACCCCCCGGACTTTCTGCAATTTCAGTAAGTGAAAAAGCTTTTGAAG TAGTTAATAAAACAGAAACAAAATCGTTCTACTTGGATTTAAAAGCGTACAAAAAATCATGGGATAAAAATAAAGAAACA CCCTATACCCCATCTGTTTCATTAACTTACGGGTTAAACGAAGCTCTTGAAATGGTTTTAGAAGAAGGCCTTGAAAAGAG ATTTGAAAGACATGAAAAACTTGCAAAAGCTACCAGAGCAGGTTTAGAAGCTATGGGAATGGAATTATTTGCAAAAGAAA AGGCACGGTCAGTTACGGTAACATCTGCAAAGTATCCAGAAGGTGTAGATGACAAGAAATTTAGGGGATTACTTGCAGAA AAATATAACATAAGAGTTGCTGGCGGTCAAGCGGACTTAACTGGAAAGATTTTCAGAGTAGGCCATATGGGTTCAGCGAA AGAATACCATGTTTTAGGAACTCTTGCTGCAATTGAACTTGCATTTGAAGAACTTGGAATAAATGCAGACGGTGGAGTGT CTGCTGCAAAAGAAATGCTTTTAAAATAA
Upstream 100 bases:
>100_bases TTAAAAACTCCTGTAAGAACAATGTATATATAATAGAAATATATATCAAATTCCGTCGATATAATTGATTATGATTAAAA CATTATTATAGAGGGATTTC
Downstream 100 bases:
>100_bases AAACTTACTTTAACTATGTTTTATAAATATTTATAAAACGTCTAATAGCCGTTTAGCTGATTTTATTTTATATATTAATC TTATTTTTTTATATATCGAG
Product: Serine--pyruvate transaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKQMDTEKLLMIPGPTVVPTRVLNVMALPIIGHRTKDFGELTEDTVDKMKQVFQTKNESYIVTGSGTAVMDMAIANTVDK GDKVLNIVNGAFGDRFYKISSVYKADAIKLENEWGDLADPNAVKEILDENEDIKAVTIVHNETSSGAKNPIEEIGNVVKD YNALYIVDTISSLGGDYVHVDKFNIDICVTGSQKCIAAPPGLSAISVSEKAFEVVNKTETKSFYLDLKAYKKSWDKNKET PYTPSVSLTYGLNEALEMVLEEGLEKRFERHEKLAKATRAGLEAMGMELFAKEKARSVTVTSAKYPEGVDDKKFRGLLAE KYNIRVAGGQADLTGKIFRVGHMGSAKEYHVLGTLAAIELAFEELGINADGGVSAAKEMLLK
Sequences:
>Translated_382_residues MKQMDTEKLLMIPGPTVVPTRVLNVMALPIIGHRTKDFGELTEDTVDKMKQVFQTKNESYIVTGSGTAVMDMAIANTVDK GDKVLNIVNGAFGDRFYKISSVYKADAIKLENEWGDLADPNAVKEILDENEDIKAVTIVHNETSSGAKNPIEEIGNVVKD YNALYIVDTISSLGGDYVHVDKFNIDICVTGSQKCIAAPPGLSAISVSEKAFEVVNKTETKSFYLDLKAYKKSWDKNKET PYTPSVSLTYGLNEALEMVLEEGLEKRFERHEKLAKATRAGLEAMGMELFAKEKARSVTVTSAKYPEGVDDKKFRGLLAE KYNIRVAGGQADLTGKIFRVGHMGSAKEYHVLGTLAAIELAFEELGINADGGVSAAKEMLLK >Mature_382_residues MKQMDTEKLLMIPGPTVVPTRVLNVMALPIIGHRTKDFGELTEDTVDKMKQVFQTKNESYIVTGSGTAVMDMAIANTVDK GDKVLNIVNGAFGDRFYKISSVYKADAIKLENEWGDLADPNAVKEILDENEDIKAVTIVHNETSSGAKNPIEEIGNVVKD YNALYIVDTISSLGGDYVHVDKFNIDICVTGSQKCIAAPPGLSAISVSEKAFEVVNKTETKSFYLDLKAYKKSWDKNKET PYTPSVSLTYGLNEALEMVLEEGLEKRFERHEKLAKATRAGLEAMGMELFAKEKARSVTVTSAKYPEGVDDKKFRGLLAE KYNIRVAGGQADLTGKIFRVGHMGSAKEYHVLGTLAAIELAFEELGINADGGVSAAKEMLLK
Specific function: Unknown
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=345, Percent_Identity=32.463768115942, Blast_Score=199, Evalue=5e-51, Organism=Caenorhabditis elegans, GI17536281, Length=346, Percent_Identity=30.9248554913295, Blast_Score=165, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6321079, Length=364, Percent_Identity=26.6483516483516, Blast_Score=118, Evalue=1e-27, Organism=Drosophila melanogaster, GI17530823, Length=346, Percent_Identity=32.0809248554913, Blast_Score=187, Evalue=7e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: 2.6.1.-
Molecular weight: Translated: 41849; Mature: 41849
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQMDTEKLLMIPGPTVVPTRVLNVMALPIIGHRTKDFGELTEDTVDKMKQVFQTKNESY CCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE IVTGSGTAVMDMAIANTVDKGDKVLNIVNGAFGDRFYKISSVYKADAIKLENEWGDLADP EEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCCCC NAVKEILDENEDIKAVTIVHNETSSGAKNPIEEIGNVVKDYNALYIVDTISSLGGDYVHV HHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEHHHCCCCEEEE DKFNIDICVTGSQKCIAAPPGLSAISVSEKAFEVVNKTETKSFYLDLKAYKKSWDKNKET EEEEEEEEEECCCCEEECCCCCCEEEHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCC PYTPSVSLTYGLNEALEMVLEEGLEKRFERHEKLAKATRAGLEAMGMELFAKEKARSVTV CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE TSAKYPEGVDDKKFRGLLAEKYNIRVAGGQADLTGKIFRVGHMGSAKEYHVLGTLAAIEL ECCCCCCCCCCHHHHHHHHHCEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH AFEELGINADGGVSAAKEMLLK HHHHHCCCCCCCHHHHHHHHCC >Mature Secondary Structure MKQMDTEKLLMIPGPTVVPTRVLNVMALPIIGHRTKDFGELTEDTVDKMKQVFQTKNESY CCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE IVTGSGTAVMDMAIANTVDKGDKVLNIVNGAFGDRFYKISSVYKADAIKLENEWGDLADP EEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCCCC NAVKEILDENEDIKAVTIVHNETSSGAKNPIEEIGNVVKDYNALYIVDTISSLGGDYVHV HHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEHHHCCCCEEEE DKFNIDICVTGSQKCIAAPPGLSAISVSEKAFEVVNKTETKSFYLDLKAYKKSWDKNKET EEEEEEEEEECCCCEEECCCCCCEEEHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCC PYTPSVSLTYGLNEALEMVLEEGLEKRFERHEKLAKATRAGLEAMGMELFAKEKARSVTV CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE TSAKYPEGVDDKKFRGLLAEKYNIRVAGGQADLTGKIFRVGHMGSAKEYHVLGTLAAIEL ECCCCCCCCCCHHHHHHHHHCEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH AFEELGINADGGVSAAKEMLLK HHHHHCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]