Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is yjjX [C]

Identifier: 150400119

GI number: 150400119

Start: 1407345

End: 1408004

Strand: Reverse

Name: yjjX [C]

Synonym: Mevan_1377

Alternate gene names: 150400119

Gene position: 1408004-1407345 (Counterclockwise)

Preceding gene: 150400120

Following gene: 150400118

Centisome position: 81.86

GC content: 35.0

Gene sequence:

>660_bases
ATGTTTGAATCTAAATTTTGCGATATTTGCGGTAAGCCCGCAAGGGAATACCGTTTTGGAAGTTTGCTTTGCGGAGATGA
AGCTTGTTTAGAAAATGCGAGAAGTGTTAGGGGGGGGCCTGCAGGACACAAATTAAGAGTTGTTTCTTTAGGAAGTGTTA
ATCCGGTAAAGGTACGTGCAACTGAAAACGCATTGACAAAAACTATCGGACAAGTTTTAATATCTAAAATTGATGTTCCA
AGTTTAGTATCAAATCAACCGTTAGGATTTGAAGAAACGTTTAAAGGAGCATATAACCGGGCAAAAGCCGCTTTTGAAAG
TGTAAATTCCGTTTTTGGAATAGGGATAGAAGCTGGAGTTATAGAAATTTTTGAAAAAAAACTGGATATTCACGTTTGTG
TTATTTATGACGGCTTAAACTATACTGTTGGAACTTCCCAAGGTTTTCAGATTCCAAACGAAGTTATTAAAAAAATAGAT
GAAGGTTTTGAATGTAGTGATGCAATCTTTGAATTATATGGTTTTAAAGATGCCGGTAAAAAAAATGGGCTTATTGGATA
TTTAACTGACGATAATATTACTAGAGAAGGTTTGTGTGTTGAAGCAGTTACAATGGCAATGATTCCAAGGTTTAAGGGAA
ACTCAAAAATAAGGTTTTAA

Upstream 100 bases:

>100_bases
ATGTTTTATAAATATTTATAAAACGTCTAATAGCCGTTTAGCTGATTTTATTTTATATATTAATCTTATTTTTTTATATA
TCGAGTTTTCTGGTGATTTA

Downstream 100 bases:

>100_bases
ATAGGACGACTACCACAAACTAATAAAGATATTTTATTTTGGGGTTTTAACCTTAATAGTAATTACAATGTTAAAAGTGA
TACTATGAATGTAGATTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MFESKFCDICGKPAREYRFGSLLCGDEACLENARSVRGGPAGHKLRVVSLGSVNPVKVRATENALTKTIGQVLISKIDVP
SLVSNQPLGFEETFKGAYNRAKAAFESVNSVFGIGIEAGVIEIFEKKLDIHVCVIYDGLNYTVGTSQGFQIPNEVIKKID
EGFECSDAIFELYGFKDAGKKNGLIGYLTDDNITREGLCVEAVTMAMIPRFKGNSKIRF

Sequences:

>Translated_219_residues
MFESKFCDICGKPAREYRFGSLLCGDEACLENARSVRGGPAGHKLRVVSLGSVNPVKVRATENALTKTIGQVLISKIDVP
SLVSNQPLGFEETFKGAYNRAKAAFESVNSVFGIGIEAGVIEIFEKKLDIHVCVIYDGLNYTVGTSQGFQIPNEVIKKID
EGFECSDAIFELYGFKDAGKKNGLIGYLTDDNITREGLCVEAVTMAMIPRFKGNSKIRF
>Mature_219_residues
MFESKFCDICGKPAREYRFGSLLCGDEACLENARSVRGGPAGHKLRVVSLGSVNPVKVRATENALTKTIGQVLISKIDVP
SLVSNQPLGFEETFKGAYNRAKAAFESVNSVFGIGIEAGVIEIFEKKLDIHVCVIYDGLNYTVGTSQGFQIPNEVIKKID
EGFECSDAIFELYGFKDAGKKNGLIGYLTDDNITREGLCVEAVTMAMIPRFKGNSKIRF

Specific function: Unknown

COG id: COG1986

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0244 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002786 [H]

Pfam domain/function: PF01931 DUF84 [H]

EC number: NA

Molecular weight: Translated: 23921; Mature: 23921

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFESKFCDICGKPAREYRFGSLLCGDEACLENARSVRGGPAGHKLRVVSLGSVNPVKVRA
CCCCCHHHHCCCCHHHHCCCCEEECCHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEE
TENALTKTIGQVLISKIDVPSLVSNQPLGFEETFKGAYNRAKAAFESVNSVFGIGIEAGV
CHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IEIFEKKLDIHVCVIYDGLNYTVGTSQGFQIPNEVIKKIDEGFECSDAIFELYGFKDAGK
HHHHHHHCCEEEEEEECCCCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
KNGLIGYLTDDNITREGLCVEAVTMAMIPRFKGNSKIRF
CCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFESKFCDICGKPAREYRFGSLLCGDEACLENARSVRGGPAGHKLRVVSLGSVNPVKVRA
CCCCCHHHHCCCCHHHHCCCCEEECCHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEE
TENALTKTIGQVLISKIDVPSLVSNQPLGFEETFKGAYNRAKAAFESVNSVFGIGIEAGV
CHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IEIFEKKLDIHVCVIYDGLNYTVGTSQGFQIPNEVIKKIDEGFECSDAIFELYGFKDAGK
HHHHHHHCCEEEEEEECCCCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
KNGLIGYLTDDNITREGLCVEAVTMAMIPRFKGNSKIRF
CCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]