| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399875
Identifier: 150399875
GI number: 150399875
Start: 1140204
End: 1141736
Strand: Reverse
Name: 150399875
Synonym: Mevan_1130
Alternate gene names: NA
Gene position: 1141736-1140204 (Counterclockwise)
Preceding gene: 150399876
Following gene: 150399874
Centisome position: 66.38
GC content: 35.75
Gene sequence:
>1533_bases ATGAAAGAACTTATAAAAAGTTCCCTAAACGATTTCGATTCTGCAATGGAACTGCGGGAAATTGTCGTGAAAAAAATAAA TGACAAAAAATTAACCGAATCAGATATTATAGACATTGTAGATTCTGTTGATGATTTATCCTTTGAAGAAATTCAAAAGT TAGGAAGTAATTTTAGAAAATTTCCATTGGGTTGCGATTTGTTAGAAATAGGGGTTGGTCCCTGTTCTTCATCCTTAAAT TTAAGTCAATTTATTGAAAATTGTATTTTAACCGATGCTATGGGCTATCCGATACATCTTTGTACCTACGCACTTGCAGA TATTGCGGAAAAAGAGGGCATTAACCCGATTGAAGTAATGAAACAAGTACATGAAAATGTTGAAGTCCCCCTTGATATTG ACCATTTTGGAAGATTTGGGCCCATGAGGTTTCCAAAAGAGATAACGCATTGCATGGGTGATTGTTATTACAATGGGCCG CCTTACAAAGGATGCCCAAGAGACCGAATTCATAAGCGGTTGATTACAAAAGAAAGGGAACATTTTGAAGAATTTAGTGA TTGGATAAATCTTTCTTCAACTGTTTGTGTAAATGTTGTTGAAGAACAAGGTGGTGGAGACCACGGTGCAGATATTTCAG AAATGGAAAATGTTTCAAAGGCTGCACAAAAATACGGGAAGGGTATTGAAGGAATCTTCCATATTGGTGACGGATATGAT GATTTAATTTCTGGCCTAAGGGCTTGCAGTGAATTAAATGTTGATGCACTCGTTATCGAAGGAGGGCCATTTAACAGGTC TAAAAATAAATTAAAGGATTTTGCAAAAGCTGTTGCAGTTTCAAGAATTCTTGTCAAAGGGGGCGTTGTTGCTACAAACG GTGCATATGAAGACGAATGTAGAGTTGGTTTAAGGAGTGGTTTAAACGTCATACTTTCAGGATTTAGTGGAAATCATCAC GGTTACATGTGCGGATACAGCCCAAAAGAAGCTAGAAGAAATAATTTTGGGCTCCCAAGAGTTTTAAAAATAATGAAAGA AGAAGCTTCAAATATGGGGATATGTATTGCAAATCGGGAACTTTTAAAAATACTTGTAAAAAGTAGCAGATTTTTAAATT ACAATGGAAAGCATATGATTTACCCCGAAATGATTGGAAATTACTTCATGGGCGATGCCCACTGGGTTTCCGTTTCAAAC AGCAAAATGTATAATGCCCCATATTTTGGAAAAACTCTTGATTCGCTTAGTGAAGAGCTTGATTCAAAGAAAATTGGGGT ACTTGGTGCCAGATATATTTCATGGGGCATTGCAAGTGCACTAAATCCCGAAGAACTTTATGTAAGCGACGTTGACCCAT TAGTTGAATATGCAACTGTTAAAATTTTAAATGATAATGGGATAAATGCATATGCCTGTAGTGGTAGCGATAGAAAAGCA CTTGAACAAGCAGATAAATCAATAATTACCACAATGATTCCAGAAATAGCATTAAGAATAAAAAACAAATTTAACGCAAT AAGCCTAATTTAA
Upstream 100 bases:
>100_bases AAGTCCAAAGACTGGAAATTTAATTGAAGTAGTCTGCCTAATAAAAGAACTCGGTTTAAAACCTAAAATTAAATAAATTC GCAAAAACAAGGTGGAATAT
Downstream 100 bases:
>100_bases CTGCCATAAGAGGCAGTAGCTTCTTTTGGTGATAAAATGAACTGGAAAGGACATATAACTCTTGGAATAATAATGGGTCT TCCATTTATTTCATCCCCTG
Product: fibrillarin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MKELIKSSLNDFDSAMELREIVVKKINDKKLTESDIIDIVDSVDDLSFEEIQKLGSNFRKFPLGCDLLEIGVGPCSSSLN LSQFIENCILTDAMGYPIHLCTYALADIAEKEGINPIEVMKQVHENVEVPLDIDHFGRFGPMRFPKEITHCMGDCYYNGP PYKGCPRDRIHKRLITKEREHFEEFSDWINLSSTVCVNVVEEQGGGDHGADISEMENVSKAAQKYGKGIEGIFHIGDGYD DLISGLRACSELNVDALVIEGGPFNRSKNKLKDFAKAVAVSRILVKGGVVATNGAYEDECRVGLRSGLNVILSGFSGNHH GYMCGYSPKEARRNNFGLPRVLKIMKEEASNMGICIANRELLKILVKSSRFLNYNGKHMIYPEMIGNYFMGDAHWVSVSN SKMYNAPYFGKTLDSLSEELDSKKIGVLGARYISWGIASALNPEELYVSDVDPLVEYATVKILNDNGINAYACSGSDRKA LEQADKSIITTMIPEIALRIKNKFNAISLI
Sequences:
>Translated_510_residues MKELIKSSLNDFDSAMELREIVVKKINDKKLTESDIIDIVDSVDDLSFEEIQKLGSNFRKFPLGCDLLEIGVGPCSSSLN LSQFIENCILTDAMGYPIHLCTYALADIAEKEGINPIEVMKQVHENVEVPLDIDHFGRFGPMRFPKEITHCMGDCYYNGP PYKGCPRDRIHKRLITKEREHFEEFSDWINLSSTVCVNVVEEQGGGDHGADISEMENVSKAAQKYGKGIEGIFHIGDGYD DLISGLRACSELNVDALVIEGGPFNRSKNKLKDFAKAVAVSRILVKGGVVATNGAYEDECRVGLRSGLNVILSGFSGNHH GYMCGYSPKEARRNNFGLPRVLKIMKEEASNMGICIANRELLKILVKSSRFLNYNGKHMIYPEMIGNYFMGDAHWVSVSN SKMYNAPYFGKTLDSLSEELDSKKIGVLGARYISWGIASALNPEELYVSDVDPLVEYATVKILNDNGINAYACSGSDRKA LEQADKSIITTMIPEIALRIKNKFNAISLI >Mature_510_residues MKELIKSSLNDFDSAMELREIVVKKINDKKLTESDIIDIVDSVDDLSFEEIQKLGSNFRKFPLGCDLLEIGVGPCSSSLN LSQFIENCILTDAMGYPIHLCTYALADIAEKEGINPIEVMKQVHENVEVPLDIDHFGRFGPMRFPKEITHCMGDCYYNGP PYKGCPRDRIHKRLITKEREHFEEFSDWINLSSTVCVNVVEEQGGGDHGADISEMENVSKAAQKYGKGIEGIFHIGDGYD DLISGLRACSELNVDALVIEGGPFNRSKNKLKDFAKAVAVSRILVKGGVVATNGAYEDECRVGLRSGLNVILSGFSGNHH GYMCGYSPKEARRNNFGLPRVLKIMKEEASNMGICIANRELLKILVKSSRFLNYNGKHMIYPEMIGNYFMGDAHWVSVSN SKMYNAPYFGKTLDSLSEELDSKKIGVLGARYISWGIASALNPEELYVSDVDPLVEYATVKILNDNGINAYACSGSDRKA LEQADKSIITTMIPEIALRIKNKFNAISLI
Specific function: Unknown
COG id: COG4018
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH1137 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016760 [H]
Pfam domain/function: PF10113 Fibrillarin_2 [H]
EC number: NA
Molecular weight: Translated: 56648; Mature: 56648
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELIKSSLNDFDSAMELREIVVKKINDKKLTESDIIDIVDSVDDLSFEEIQKLGSNFRK CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC FPLGCDLLEIGVGPCSSSLNLSQFIENCILTDAMGYPIHLCTYALADIAEKEGINPIEVM CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHH KQVHENVEVPLDIDHFGRFGPMRFPKEITHCMGDCYYNGPPYKGCPRDRIHKRLITKERE HHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH HFEEFSDWINLSSTVCVNVVEEQGGGDHGADISEMENVSKAAQKYGKGIEGIFHIGDGYD HHHHHHHHHCCCCHHHEEEHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHH DLISGLRACSELNVDALVIEGGPFNRSKNKLKDFAKAVAVSRILVKGGVVATNGAYEDEC HHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHH RVGLRSGLNVILSGFSGNHHGYMCGYSPKEARRNNFGLPRVLKIMKEEASNMGICIANRE HHHHHCCCHHEEECCCCCCCCEECCCCHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECHH LLKILVKSSRFLNYNGKHMIYPEMIGNYFMGDAHWVSVSNSKMYNAPYFGKTLDSLSEEL HHHHHHHHHHHCCCCCCEEECHHHHCCHHCCCEEEEEECCCEEECCCCCHHHHHHHHHHH DSKKIGVLGARYISWGIASALNPEELYVSDVDPLVEYATVKILNDNGINAYACSGSDRKA CCCHHHHHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHEEEEEECCCCEEEEECCCCHHH LEQADKSIITTMIPEIALRIKNKFNAISLI HHHHHHHHHHHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure MKELIKSSLNDFDSAMELREIVVKKINDKKLTESDIIDIVDSVDDLSFEEIQKLGSNFRK CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC FPLGCDLLEIGVGPCSSSLNLSQFIENCILTDAMGYPIHLCTYALADIAEKEGINPIEVM CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHH KQVHENVEVPLDIDHFGRFGPMRFPKEITHCMGDCYYNGPPYKGCPRDRIHKRLITKERE HHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH HFEEFSDWINLSSTVCVNVVEEQGGGDHGADISEMENVSKAAQKYGKGIEGIFHIGDGYD HHHHHHHHHCCCCHHHEEEHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHH DLISGLRACSELNVDALVIEGGPFNRSKNKLKDFAKAVAVSRILVKGGVVATNGAYEDEC HHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHH RVGLRSGLNVILSGFSGNHHGYMCGYSPKEARRNNFGLPRVLKIMKEEASNMGICIANRE HHHHHCCCHHEEECCCCCCCCEECCCCHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECHH LLKILVKSSRFLNYNGKHMIYPEMIGNYFMGDAHWVSVSNSKMYNAPYFGKTLDSLSEEL HHHHHHHHHHHCCCCCCEEECHHHHCCHHCCCEEEEEECCCEEECCCCCHHHHHHHHHHH DSKKIGVLGARYISWGIASALNPEELYVSDVDPLVEYATVKILNDNGINAYACSGSDRKA CCCHHHHHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHEEEEEECCCCEEEEECCCCHHH LEQADKSIITTMIPEIALRIKNKFNAISLI HHHHHHHHHHHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]