Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399875

Identifier: 150399875

GI number: 150399875

Start: 1140204

End: 1141736

Strand: Reverse

Name: 150399875

Synonym: Mevan_1130

Alternate gene names: NA

Gene position: 1141736-1140204 (Counterclockwise)

Preceding gene: 150399876

Following gene: 150399874

Centisome position: 66.38

GC content: 35.75

Gene sequence:

>1533_bases
ATGAAAGAACTTATAAAAAGTTCCCTAAACGATTTCGATTCTGCAATGGAACTGCGGGAAATTGTCGTGAAAAAAATAAA
TGACAAAAAATTAACCGAATCAGATATTATAGACATTGTAGATTCTGTTGATGATTTATCCTTTGAAGAAATTCAAAAGT
TAGGAAGTAATTTTAGAAAATTTCCATTGGGTTGCGATTTGTTAGAAATAGGGGTTGGTCCCTGTTCTTCATCCTTAAAT
TTAAGTCAATTTATTGAAAATTGTATTTTAACCGATGCTATGGGCTATCCGATACATCTTTGTACCTACGCACTTGCAGA
TATTGCGGAAAAAGAGGGCATTAACCCGATTGAAGTAATGAAACAAGTACATGAAAATGTTGAAGTCCCCCTTGATATTG
ACCATTTTGGAAGATTTGGGCCCATGAGGTTTCCAAAAGAGATAACGCATTGCATGGGTGATTGTTATTACAATGGGCCG
CCTTACAAAGGATGCCCAAGAGACCGAATTCATAAGCGGTTGATTACAAAAGAAAGGGAACATTTTGAAGAATTTAGTGA
TTGGATAAATCTTTCTTCAACTGTTTGTGTAAATGTTGTTGAAGAACAAGGTGGTGGAGACCACGGTGCAGATATTTCAG
AAATGGAAAATGTTTCAAAGGCTGCACAAAAATACGGGAAGGGTATTGAAGGAATCTTCCATATTGGTGACGGATATGAT
GATTTAATTTCTGGCCTAAGGGCTTGCAGTGAATTAAATGTTGATGCACTCGTTATCGAAGGAGGGCCATTTAACAGGTC
TAAAAATAAATTAAAGGATTTTGCAAAAGCTGTTGCAGTTTCAAGAATTCTTGTCAAAGGGGGCGTTGTTGCTACAAACG
GTGCATATGAAGACGAATGTAGAGTTGGTTTAAGGAGTGGTTTAAACGTCATACTTTCAGGATTTAGTGGAAATCATCAC
GGTTACATGTGCGGATACAGCCCAAAAGAAGCTAGAAGAAATAATTTTGGGCTCCCAAGAGTTTTAAAAATAATGAAAGA
AGAAGCTTCAAATATGGGGATATGTATTGCAAATCGGGAACTTTTAAAAATACTTGTAAAAAGTAGCAGATTTTTAAATT
ACAATGGAAAGCATATGATTTACCCCGAAATGATTGGAAATTACTTCATGGGCGATGCCCACTGGGTTTCCGTTTCAAAC
AGCAAAATGTATAATGCCCCATATTTTGGAAAAACTCTTGATTCGCTTAGTGAAGAGCTTGATTCAAAGAAAATTGGGGT
ACTTGGTGCCAGATATATTTCATGGGGCATTGCAAGTGCACTAAATCCCGAAGAACTTTATGTAAGCGACGTTGACCCAT
TAGTTGAATATGCAACTGTTAAAATTTTAAATGATAATGGGATAAATGCATATGCCTGTAGTGGTAGCGATAGAAAAGCA
CTTGAACAAGCAGATAAATCAATAATTACCACAATGATTCCAGAAATAGCATTAAGAATAAAAAACAAATTTAACGCAAT
AAGCCTAATTTAA

Upstream 100 bases:

>100_bases
AAGTCCAAAGACTGGAAATTTAATTGAAGTAGTCTGCCTAATAAAAGAACTCGGTTTAAAACCTAAAATTAAATAAATTC
GCAAAAACAAGGTGGAATAT

Downstream 100 bases:

>100_bases
CTGCCATAAGAGGCAGTAGCTTCTTTTGGTGATAAAATGAACTGGAAAGGACATATAACTCTTGGAATAATAATGGGTCT
TCCATTTATTTCATCCCCTG

Product: fibrillarin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MKELIKSSLNDFDSAMELREIVVKKINDKKLTESDIIDIVDSVDDLSFEEIQKLGSNFRKFPLGCDLLEIGVGPCSSSLN
LSQFIENCILTDAMGYPIHLCTYALADIAEKEGINPIEVMKQVHENVEVPLDIDHFGRFGPMRFPKEITHCMGDCYYNGP
PYKGCPRDRIHKRLITKEREHFEEFSDWINLSSTVCVNVVEEQGGGDHGADISEMENVSKAAQKYGKGIEGIFHIGDGYD
DLISGLRACSELNVDALVIEGGPFNRSKNKLKDFAKAVAVSRILVKGGVVATNGAYEDECRVGLRSGLNVILSGFSGNHH
GYMCGYSPKEARRNNFGLPRVLKIMKEEASNMGICIANRELLKILVKSSRFLNYNGKHMIYPEMIGNYFMGDAHWVSVSN
SKMYNAPYFGKTLDSLSEELDSKKIGVLGARYISWGIASALNPEELYVSDVDPLVEYATVKILNDNGINAYACSGSDRKA
LEQADKSIITTMIPEIALRIKNKFNAISLI

Sequences:

>Translated_510_residues
MKELIKSSLNDFDSAMELREIVVKKINDKKLTESDIIDIVDSVDDLSFEEIQKLGSNFRKFPLGCDLLEIGVGPCSSSLN
LSQFIENCILTDAMGYPIHLCTYALADIAEKEGINPIEVMKQVHENVEVPLDIDHFGRFGPMRFPKEITHCMGDCYYNGP
PYKGCPRDRIHKRLITKEREHFEEFSDWINLSSTVCVNVVEEQGGGDHGADISEMENVSKAAQKYGKGIEGIFHIGDGYD
DLISGLRACSELNVDALVIEGGPFNRSKNKLKDFAKAVAVSRILVKGGVVATNGAYEDECRVGLRSGLNVILSGFSGNHH
GYMCGYSPKEARRNNFGLPRVLKIMKEEASNMGICIANRELLKILVKSSRFLNYNGKHMIYPEMIGNYFMGDAHWVSVSN
SKMYNAPYFGKTLDSLSEELDSKKIGVLGARYISWGIASALNPEELYVSDVDPLVEYATVKILNDNGINAYACSGSDRKA
LEQADKSIITTMIPEIALRIKNKFNAISLI
>Mature_510_residues
MKELIKSSLNDFDSAMELREIVVKKINDKKLTESDIIDIVDSVDDLSFEEIQKLGSNFRKFPLGCDLLEIGVGPCSSSLN
LSQFIENCILTDAMGYPIHLCTYALADIAEKEGINPIEVMKQVHENVEVPLDIDHFGRFGPMRFPKEITHCMGDCYYNGP
PYKGCPRDRIHKRLITKEREHFEEFSDWINLSSTVCVNVVEEQGGGDHGADISEMENVSKAAQKYGKGIEGIFHIGDGYD
DLISGLRACSELNVDALVIEGGPFNRSKNKLKDFAKAVAVSRILVKGGVVATNGAYEDECRVGLRSGLNVILSGFSGNHH
GYMCGYSPKEARRNNFGLPRVLKIMKEEASNMGICIANRELLKILVKSSRFLNYNGKHMIYPEMIGNYFMGDAHWVSVSN
SKMYNAPYFGKTLDSLSEELDSKKIGVLGARYISWGIASALNPEELYVSDVDPLVEYATVKILNDNGINAYACSGSDRKA
LEQADKSIITTMIPEIALRIKNKFNAISLI

Specific function: Unknown

COG id: COG4018

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH1137 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016760 [H]

Pfam domain/function: PF10113 Fibrillarin_2 [H]

EC number: NA

Molecular weight: Translated: 56648; Mature: 56648

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELIKSSLNDFDSAMELREIVVKKINDKKLTESDIIDIVDSVDDLSFEEIQKLGSNFRK
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC
FPLGCDLLEIGVGPCSSSLNLSQFIENCILTDAMGYPIHLCTYALADIAEKEGINPIEVM
CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHH
KQVHENVEVPLDIDHFGRFGPMRFPKEITHCMGDCYYNGPPYKGCPRDRIHKRLITKERE
HHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
HFEEFSDWINLSSTVCVNVVEEQGGGDHGADISEMENVSKAAQKYGKGIEGIFHIGDGYD
HHHHHHHHHCCCCHHHEEEHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHH
DLISGLRACSELNVDALVIEGGPFNRSKNKLKDFAKAVAVSRILVKGGVVATNGAYEDEC
HHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHH
RVGLRSGLNVILSGFSGNHHGYMCGYSPKEARRNNFGLPRVLKIMKEEASNMGICIANRE
HHHHHCCCHHEEECCCCCCCCEECCCCHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECHH
LLKILVKSSRFLNYNGKHMIYPEMIGNYFMGDAHWVSVSNSKMYNAPYFGKTLDSLSEEL
HHHHHHHHHHHCCCCCCEEECHHHHCCHHCCCEEEEEECCCEEECCCCCHHHHHHHHHHH
DSKKIGVLGARYISWGIASALNPEELYVSDVDPLVEYATVKILNDNGINAYACSGSDRKA
CCCHHHHHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHEEEEEECCCCEEEEECCCCHHH
LEQADKSIITTMIPEIALRIKNKFNAISLI
HHHHHHHHHHHHHHHHHHHHHHCCCCEECC
>Mature Secondary Structure
MKELIKSSLNDFDSAMELREIVVKKINDKKLTESDIIDIVDSVDDLSFEEIQKLGSNFRK
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC
FPLGCDLLEIGVGPCSSSLNLSQFIENCILTDAMGYPIHLCTYALADIAEKEGINPIEVM
CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHH
KQVHENVEVPLDIDHFGRFGPMRFPKEITHCMGDCYYNGPPYKGCPRDRIHKRLITKERE
HHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
HFEEFSDWINLSSTVCVNVVEEQGGGDHGADISEMENVSKAAQKYGKGIEGIFHIGDGYD
HHHHHHHHHCCCCHHHEEEHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHH
DLISGLRACSELNVDALVIEGGPFNRSKNKLKDFAKAVAVSRILVKGGVVATNGAYEDEC
HHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHH
RVGLRSGLNVILSGFSGNHHGYMCGYSPKEARRNNFGLPRVLKIMKEEASNMGICIANRE
HHHHHCCCHHEEECCCCCCCCEECCCCHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECHH
LLKILVKSSRFLNYNGKHMIYPEMIGNYFMGDAHWVSVSNSKMYNAPYFGKTLDSLSEEL
HHHHHHHHHHHCCCCCCEEECHHHHCCHHCCCEEEEEECCCEEECCCCCHHHHHHHHHHH
DSKKIGVLGARYISWGIASALNPEELYVSDVDPLVEYATVKILNDNGINAYACSGSDRKA
CCCHHHHHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHEEEEEECCCCEEEEECCCCHHH
LEQADKSIITTMIPEIALRIKNKFNAISLI
HHHHHHHHHHHHHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]